FFCP PHASE1:Hg19::chr6:161695042..161695064,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:161695042..161695064,-
|short_description=p2@AGPAT4
|description=CAGE_peak_2_at_AGPAT4_5end
|association_with_transcript=0bp_to_ENST00000366905,ENST0000036...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56895 | |EntrezGene=56895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20885 | |HGNC=20885 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TEE8,G3XAF1,Q6AI25 | |UniProt=Q5TEE8,G3XAF1,Q6AI25 | ||
|association_with_transcript=0bp_to_ENST00000366905,ENST00000366908,ENST00000366911_5end | |||
|cluster_id=chr6:161695042..161695064,- | |||
|coexpression_cluster_id=C2564 | |||
|description=CAGE_peak_2_at_AGPAT4_5end | |||
|id=chr6:161695042..161695064,- | |||
|ontology_enrichment_celltype=CL:0002057!1.29e-23!42;CL:0000860!1.51e-19!45;CL:0002009!6.12e-17!65;CL:0002194!2.25e-16!63;CL:0000576!2.25e-16!63;CL:0000040!2.25e-16!63;CL:0000559!2.25e-16!63;CL:0000839!4.39e-16!70;CL:0000557!4.92e-15!71;CL:0000766!2.29e-14!76;CL:0002031!1.21e-09!124;CL:0002087!2.06e-09!119;CL:0000738!4.39e-08!140;CL:0000763!1.39e-07!112;CL:0000049!1.39e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;8.42e-16;39!CL:0000234;8.42e-16;39!CL:0000576;5.94e-13;48!CL:0000766;1.40e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-23,42;CL:0002057,1.10e-23,42;CL:0000473,4.85e-23,48;CL:0000234,4.85e-23,48;CL:0002009,2.24e-20,61;CL:0002194,8.35e-20,59;CL:0000576,8.35e-20,59;CL:0000040,8.35e-20,59;CL:0000559,8.35e-20,59;CL:0000839,3.64e-19,66;CL:0000557,6.00e-18,67;CL:0000766,3.17e-17,72;CL:0002031,3.47e-11,120;CL:0002087,5.23e-11,115;CL:0000738,1.70e-09,136;CL:0000763,4.94e-09,108;CL:0000049,4.94e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.81e-26!82;UBERON:0001049!3.63e-25!57;UBERON:0005068!3.63e-25!57;UBERON:0006241!3.63e-25!57;UBERON:0007135!3.63e-25!57;UBERON:0005743!1.43e-24!86;UBERON:0000073!1.99e-23!94;UBERON:0001016!1.99e-23!94;UBERON:0002616!7.17e-22!59;UBERON:0000955!3.82e-21!69;UBERON:0006238!3.82e-21!69;UBERON:0002346!1.77e-18!90;UBERON:0003080!2.17e-18!42;UBERON:0003075!3.82e-18!86;UBERON:0007284!3.82e-18!86;UBERON:0002780!4.11e-18!41;UBERON:0001890!4.11e-18!41;UBERON:0006240!4.11e-18!41;UBERON:0002020!1.38e-17!34;UBERON:0003528!1.38e-17!34;UBERON:0001893!1.62e-17!34;UBERON:0002791!4.46e-17!33;UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0001869!2.61e-16!32;UBERON:0001474!1.03e-15!86;UBERON:0002371!1.39e-15!80;UBERON:0003056!5.22e-15!61;UBERON:0004765!4.17e-14!101;UBERON:0001434!4.17e-14!101;UBERON:0002193!1.73e-13!112;UBERON:0000033!1.90e-13!123;UBERON:0000153!2.09e-13!129;UBERON:0007811!2.09e-13!129;UBERON:0000956!5.21e-13!25;UBERON:0000203!5.21e-13!25;UBERON:0002619!2.61e-12!22;UBERON:0001950!2.24e-11!20;UBERON:0000924!2.09e-10!173;UBERON:0006601!2.09e-10!173;UBERON:0007023!2.87e-10!115;UBERON:0004121!5.19e-10!169;UBERON:0002204!4.66e-08!167;UBERON:0003076!5.74e-08!15;UBERON:0003057!5.74e-08!15;UBERON:0004732!7.06e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.71e-15;34!UBERON:0002020;2.71e-15;34!UBERON:0001893;2.85e-15;34!UBERON:0002791;3.71e-15;32!UBERON:0001869;4.62e-15;32!UBERON:0000073;1.18e-13;53!UBERON:0002616;1.18e-13;53!UBERON:0002780;1.24e-13;41!UBERON:0001890;1.24e-13;41!UBERON:0000956;3.62e-13;25!UBERON:0000203;3.62e-13;25!UBERON:0002619;2.00e-12;22!UBERON:0001950;1.78e-11;20!UBERON:0001017;2.65e-10;75!UBERON:0000955;1.36e-09;68!UBERON:0001016;1.33e-08;83!UBERON:0004732;6.32e-07;13 | |||
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| ||
|short_description=p2@AGPAT4 | |||
}} | }} |
Latest revision as of 17:14, 16 September 2015
Short description: | p2@AGPAT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGPAT4_5end |
Coexpression cluster: | C2564_optic_CD14_spinal_corpus_thalamus_substantia_locus |
Association with transcript: | 0bp_to_ENST00000366905, ENST00000366908, ENST00000366911_5end |
EntrezGene: | AGPAT4 |
HGNC: | 20885 |
UniProt: | Q5TEE8G3XAF1Q6AI25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-23 | 42 |
defensive cell | 4.85e-23 | 48 |
phagocyte | 4.85e-23 | 48 |
macrophage dendritic cell progenitor | 2.24e-20 | 61 |
monopoietic cell | 8.35e-20 | 59 |
monocyte | 8.35e-20 | 59 |
monoblast | 8.35e-20 | 59 |
promonocyte | 8.35e-20 | 59 |
myeloid lineage restricted progenitor cell | 3.64e-19 | 66 |
granulocyte monocyte progenitor cell | 6.00e-18 | 67 |
myeloid leukocyte | 3.17e-17 | 72 |
hematopoietic lineage restricted progenitor cell | 3.47e-11 | 120 |
nongranular leukocyte | 5.23e-11 | 115 |
leukocyte | 1.70e-09 | 136 |
myeloid cell | 4.94e-09 | 108 |
common myeloid progenitor | 4.94e-09 | 108 |