FFCP PHASE1:Hg19::chr6:161695019..161695036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56895 | |EntrezGene=56895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20885 | |HGNC=20885 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAF1 | |UniProt=G3XAF1 | ||
|association_with_transcript=14bp_to_ENST00000366908_5end | |association_with_transcript=14bp_to_ENST00000366908_5end | ||
|cluster_id=chr6:161695019..161695036,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_AGPAT4_5end | |description=CAGE_peak_3_at_AGPAT4_5end | ||
|id=chr6:161695019..161695036,- | |id=chr6:161695019..161695036,- | ||
|ontology_enrichment_celltype=CL:0002057!1.66e-21!42;CL:0000860!4.08e-18!45;CL:0000839!6.11e-14!70;CL:0002009!2.02e-13!65;CL:0000557!2.73e-13!71;CL:0002194!1.27e-12!63;CL:0000576!1.27e-12!63;CL:0000040!1.27e-12!63;CL:0000559!1.27e-12!63;CL:0000766!2.59e-11!76 | |ontology_enrichment_celltype=CL:0002057!1.66e-21!42;CL:0000860!4.08e-18!45;CL:0000839!6.11e-14!70;CL:0002009!2.02e-13!65;CL:0000557!2.73e-13!71;CL:0002194!1.27e-12!63;CL:0000576!1.27e-12!63;CL:0000040!1.27e-12!63;CL:0000559!1.27e-12!63;CL:0000766!2.59e-11!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.33e-19;33!CL:0002057;6.33e-19;33!CL:0000473;4.42e-13;39!CL:0000234;4.42e-13;39!CL:0000576;2.00e-12;48!CL:0000766;5.10e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.04e-23,42;CL:0002057,9.04e-23,42;CL:0000473,3.72e-19,48;CL:0000234,3.72e-19,48;CL:0000839,1.72e-17,66;CL:0002009,3.20e-17,61;CL:0000557,6.65e-17,67;CL:0002194,2.61e-16,59;CL:0000576,2.61e-16,59;CL:0000040,2.61e-16,59;CL:0000559,2.61e-16,59;CL:0000766,8.81e-15,72;CL:0002031,5.44e-08,120;CL:0000763,4.61e-07,108;CL:0000049,4.61e-07,108;CL:0002087,6.83e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.94e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.42e-26!57;UBERON:0005068!1.42e-26!57;UBERON:0006241!1.42e-26!57;UBERON:0007135!1.42e-26!57;UBERON:0001017!2.69e-25!82;UBERON:0005743!1.24e-24!86;UBERON:0000073!3.82e-23!94;UBERON:0001016!3.82e-23!94;UBERON:0002616!2.06e-22!59;UBERON:0002346!9.79e-21!90;UBERON:0000955!1.12e-20!69;UBERON:0006238!1.12e-20!69;UBERON:0003075!2.10e-20!86;UBERON:0007284!2.10e-20!86;UBERON:0003080!9.54e-19!42;UBERON:0002780!1.36e-18!41;UBERON:0001890!1.36e-18!41;UBERON:0006240!1.36e-18!41;UBERON:0002020!1.47e-18!34;UBERON:0003528!1.47e-18!34;UBERON:0001893!1.60e-18!34;UBERON:0002791!6.42e-18!33;UBERON:0001869!3.52e-17!32;UBERON:0003056!7.22e-15!61;UBERON:0000153!4.00e-14!129;UBERON:0007811!4.00e-14!129;UBERON:0000033!4.06e-14!123;UBERON:0000956!2.71e-13!25;UBERON:0000203!2.71e-13!25;UBERON:0002371!2.84e-13!80;UBERON:0001474!7.28e-13!86;UBERON:0002619!1.13e-12!22;UBERON:0004765!2.05e-12!101;UBERON:0001434!2.05e-12!101;UBERON:0000924!4.73e-12!173;UBERON:0006601!4.73e-12!173;UBERON:0001950!9.96e-12!20;UBERON:0004121!1.26e-11!169;UBERON:0002390!2.33e-11!102;UBERON:0003061!2.33e-11!102;UBERON:0007023!3.20e-10!115;UBERON:0002193!1.78e-09!112;UBERON:0003076!4.83e-09!15;UBERON:0003057!4.83e-09!15;UBERON:0002204!5.65e-09!167;UBERON:0004732!8.03e-08!13;UBERON:0000468!9.86e-08!659;UBERON:0000922!3.52e-07!612;UBERON:0004733!3.75e-07!12;UBERON:0002028!3.75e-07!12;UBERON:0007277!3.75e-07!12;UBERON:0002308!8.60e-07!9;UBERON:0000125!8.60e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.42e-26!57;UBERON:0005068!1.42e-26!57;UBERON:0006241!1.42e-26!57;UBERON:0007135!1.42e-26!57;UBERON:0001017!2.69e-25!82;UBERON:0005743!1.24e-24!86;UBERON:0000073!3.82e-23!94;UBERON:0001016!3.82e-23!94;UBERON:0002616!2.06e-22!59;UBERON:0002346!9.79e-21!90;UBERON:0000955!1.12e-20!69;UBERON:0006238!1.12e-20!69;UBERON:0003075!2.10e-20!86;UBERON:0007284!2.10e-20!86;UBERON:0003080!9.54e-19!42;UBERON:0002780!1.36e-18!41;UBERON:0001890!1.36e-18!41;UBERON:0006240!1.36e-18!41;UBERON:0002020!1.47e-18!34;UBERON:0003528!1.47e-18!34;UBERON:0001893!1.60e-18!34;UBERON:0002791!6.42e-18!33;UBERON:0001869!3.52e-17!32;UBERON:0003056!7.22e-15!61;UBERON:0000153!4.00e-14!129;UBERON:0007811!4.00e-14!129;UBERON:0000033!4.06e-14!123;UBERON:0000956!2.71e-13!25;UBERON:0000203!2.71e-13!25;UBERON:0002371!2.84e-13!80;UBERON:0001474!7.28e-13!86;UBERON:0002619!1.13e-12!22;UBERON:0004765!2.05e-12!101;UBERON:0001434!2.05e-12!101;UBERON:0000924!4.73e-12!173;UBERON:0006601!4.73e-12!173;UBERON:0001950!9.96e-12!20;UBERON:0004121!1.26e-11!169;UBERON:0002390!2.33e-11!102;UBERON:0003061!2.33e-11!102;UBERON:0007023!3.20e-10!115;UBERON:0002193!1.78e-09!112;UBERON:0003076!4.83e-09!15;UBERON:0003057!4.83e-09!15;UBERON:0002204!5.65e-09!167;UBERON:0004732!8.03e-08!13;UBERON:0000468!9.86e-08!659;UBERON:0000922!3.52e-07!612;UBERON:0004733!3.75e-07!12;UBERON:0002028!3.75e-07!12;UBERON:0007277!3.75e-07!12;UBERON:0002308!8.60e-07!9;UBERON:0000125!8.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.45e-17;34!UBERON:0003528;7.03e-17;34!UBERON:0002020;7.03e-17;34!UBERON:0002791;1.33e-16;32!UBERON:0001869;1.41e-16;32!UBERON:0000073;1.93e-15;53!UBERON:0002616;1.93e-15;53!UBERON:0002780;8.34e-15;41!UBERON:0001890;8.34e-15;41!UBERON:0000956;4.48e-14;25!UBERON:0000203;4.48e-14;25!UBERON:0002619;1.64e-13;22!UBERON:0001950;1.68e-12;20!UBERON:0001017;1.10e-10;75!UBERON:0000955;2.73e-10;68!UBERON:0001016;6.29e-09;83!UBERON:0004732;2.51e-08;13!UBERON:0004733;1.32e-07;12!UBERON:0002028;1.32e-07;12!UBERON:0000125;3.58e-07;9!UBERON:0002308;3.58e-07;9 | |||
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| ||
|short_description=p3@AGPAT4 | |short_description=p3@AGPAT4 | ||
}} | }} |
Latest revision as of 17:13, 16 September 2015
Short description: | p3@AGPAT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGPAT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 14bp_to_ENST00000366908_5end |
EntrezGene: | AGPAT4 |
HGNC: | 20885 |
UniProt: | G3XAF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.04e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.04e-23 | 42 |
defensive cell | 3.72e-19 | 48 |
phagocyte | 3.72e-19 | 48 |
myeloid lineage restricted progenitor cell | 1.72e-17 | 66 |
macrophage dendritic cell progenitor | 3.20e-17 | 61 |
granulocyte monocyte progenitor cell | 6.65e-17 | 67 |
monopoietic cell | 2.61e-16 | 59 |
monocyte | 2.61e-16 | 59 |
monoblast | 2.61e-16 | 59 |
promonocyte | 2.61e-16 | 59 |
myeloid leukocyte | 8.81e-15 | 72 |
hematopoietic lineage restricted progenitor cell | 5.44e-08 | 120 |
myeloid cell | 4.61e-07 | 108 |
common myeloid progenitor | 4.61e-07 | 108 |
nongranular leukocyte | 6.83e-07 | 115 |