FFCP PHASE1:Hg19::chrY:16915943..16915949,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=38793|UniProt=|association_with_transcript=-30bp_to_ENST00000434164_5end|description=CAGE_peak_1_at_NLGN4Y-AS1_5end|id=chrY:16915943..16915949,-|ontology_enrichment_celltype=CL:0000359!6.89e-35!32;CL:0002595!2.85e-31!5;CL:0000192!3.35e-26!42;CL:0000514!3.35e-26!42;CL:0002593!4.04e-20!2;CL:0000187!5.14e-20!54;CL:0000680!7.11e-19!57;CL:0000056!7.11e-19!57;CL:0000355!7.11e-19!57;CL:0000183!3.53e-18!59;CL:0000393!7.57e-18!60;CL:0000211!7.57e-18!60;CL:0002539!1.09e-15!10;CL:0000222!1.28e-11!119;CL:0002566!1.77e-10!1;CL:0000569!2.15e-10!4;CL:0000011!2.15e-10!4;CL:0000055!2.14e-09!180;CL:0000220!2.53e-07!246;CL:0002321!3.04e-07!248;CL:0005020!3.05e-07!6;CL:0002138!3.05e-07!6;CL:0005022!3.05e-07!6|ontology_enrichment_celltype_v019=CL:0000359;3.78e-41;32!CL:0002595;3.56e-40;5!CL:0000192;3.27e-26;43!CL:0000187;1.03e-14;55!CL:0002589;2.45e-12;2!CL:0002593;3.24e-12;2!CL:0000393;9.88e-11;61!CL:0000211;9.88e-11;61!CL:0002539;8.09e-10;10!CL:0002592;1.40e-08;3!CL:0002594;6.50e-07;4!CL:0000569;9.63e-07;4|ontology_enrichment_celltype_v019_2=CL:0000359,1.14e-43,32;CL:0002595,4.35e-40,5;CL:0000192,1.63e-32,43;CL:0000514,1.63e-32,43;CL:0000187,2.03e-25,55;CL:0000680,4.21e-24,58;CL:0000056,4.21e-24,58;CL:0000355,4.21e-24,58;CL:0000393,6.49e-23,61;CL:0000211,6.49e-23,61;CL:0002589,2.59e-12,2;CL:0002593,3.62e-12,2;CL:0000222,1.78e-11,121;CL:0002539,7.74e-10,10;CL:0002592,1.30e-08,3;CL:0002594,6.50e-07,4;CL:0002321,8.32e-07,250;CL:0000569,9.63e-07,4;CL:0000011,9.63e-07,4|ontology_enrichment_development_v019=CL:0000514;3.27e-26;43!CL:0000355;6.01e-10;58!CL:0000011;9.63e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003834!2.85e-31!5;UBERON:0001533!2.85e-31!5;UBERON:0004573!8.49e-28!33;UBERON:0004571!8.49e-28!33;UBERON:0001637!3.35e-26!42;UBERON:0003509!3.35e-26!42;UBERON:0004572!3.35e-26!42;UBERON:0000055!1.50e-21!69;UBERON:0002456!4.04e-20!2;UBERON:0003513!1.14e-19!8;UBERON:0002049!1.46e-18!79;UBERON:0007798!1.46e-18!79;UBERON:0001981!7.57e-18!60;UBERON:0007500!7.57e-18!60;UBERON:0004537!7.57e-18!60;UBERON:0006965!7.57e-18!60;UBERON:0001134!1.58e-17!61;UBERON:0002036!1.58e-17!61;UBERON:0003082!1.58e-17!61;UBERON:0004872!2.53e-17!84;UBERON:0004535!2.81e-17!110;UBERON:0002385!6.44e-17!63;UBERON:0001015!6.44e-17!63;UBERON:0000383!6.44e-17!63;UBERON:0001009!9.34e-17!113;UBERON:0004237!1.09e-15!10;UBERON:0004695!1.09e-15!10;UBERON:0002111!1.09e-15!10;UBERON:0004178!1.09e-15!10;UBERON:0004290!4.66e-15!70;UBERON:0000486!1.32e-12!82;UBERON:0000914!1.96e-12!83;UBERON:0002329!1.96e-12!83;UBERON:0003077!1.96e-12!83;UBERON:0003059!1.96e-12!83;UBERON:0007282!1.96e-12!83;UBERON:0009618!1.96e-12!83;UBERON:0007285!1.96e-12!83;UBERON:0003914!9.96e-12!118;UBERON:0001135!1.57e-10!15;UBERON:0000490!3.57e-08!138;UBERON:0005256!8.05e-08!143;UBERON:0004111!1.38e-07!241;UBERON:0000947!1.45e-07!21;UBERON:0010191!1.45e-07!21|ontology_enrichment_uberon_v019=UBERON:0003834;3.56e-40;5!UBERON:0001533;3.56e-40;5!UBERON:0004573;3.69e-29;33!UBERON:0004571;3.69e-29;33!UBERON:0003513;5.91e-29;7!UBERON:0001637;2.71e-27;42!UBERON:0003509;2.71e-27;42!UBERON:0004572;2.71e-27;42!UBERON:0007500;2.26e-12;56!UBERON:0001981;2.26e-12;56!UBERON:0004537;2.26e-12;56!UBERON:0001529;2.45e-12;2!UBERON:0007204;2.45e-12;2!UBERON:0002456;3.24e-12;2!UBERON:0002049;2.08e-10;75!UBERON:0007798;2.08e-10;75!UBERON:0004237;8.09e-10;10!UBERON:0004695;8.09e-10;10!UBERON:0002111;8.09e-10;10!UBERON:0004178;8.09e-10;10!UBERON:0003914;6.35e-09;74!UBERON:0003498;1.40e-08;3!UBERON:0005985;1.40e-08;3!UBERON:0001621;1.40e-08;3!UBERON:0000055;1.72e-08;65!UBERON:0004535;1.74e-07;109!UBERON:0001009;2.43e-07;112!UBERON:0001310;6.50e-07;4!UBERON:0001135;7.63e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.35e-40,5;UBERON:0001533,4.35e-40,5;UBERON:0001637,2.75e-33,42;UBERON:0003509,2.75e-33,42;UBERON:0004572,2.75e-33,42;UBERON:0004573,1.95e-32,33;UBERON:0004571,1.95e-32,33;UBERON:0003513,6.83e-29,7;UBERON:0007500,1.08e-23,59;UBERON:0001981,1.08e-23,59;UBERON:0004537,1.08e-23,59;UBERON:0006965,1.08e-23,59;UBERON:0001134,1.52e-22,62;UBERON:0002036,1.52e-22,62;UBERON:0003082,1.52e-22,62;UBERON:0002385,7.75e-22,64;UBERON:0001015,7.75e-22,64;UBERON:0000383,7.75e-22,64;UBERON:0004872,3.01e-21,83;UBERON:0000055,1.51e-20,68;UBERON:0002329,1.12e-19,71;UBERON:0003059,1.12e-19,71;UBERON:0007282,1.12e-19,71;UBERON:0004290,1.12e-19,71;UBERON:0009618,1.12e-19,71;UBERON:0003077,2.11e-19,72;UBERON:0007285,2.11e-19,72;UBERON:0007524,3.91e-19,73;UBERON:0002049,6.69e-18,78;UBERON:0007503,6.69e-18,78;UBERON:0007798,6.69e-18,78;UBERON:0000486,8.16e-17,83;UBERON:0004535,3.81e-16,109;UBERON:0001009,1.04e-15,112;UBERON:0003914,4.98e-15,117;UBERON:0001529,2.59e-12,2;UBERON:0007204,2.59e-12,2;UBERON:0002456,3.62e-12,2;UBERON:0005256,2.22e-11,122;UBERON:0004237,7.74e-10,10;UBERON:0004695,7.74e-10,10;UBERON:0002111,7.74e-10,10;UBERON:0004178,7.74e-10,10;UBERON:0000490,2.47e-09,148;UBERON:0000025,5.27e-09,192;UBERON:0001621,1.30e-08,3;UBERON:0003104,1.30e-08,160;UBERON:0009142,1.30e-08,160;UBERON:0003081,1.68e-08,203;UBERON:0002204,3.47e-08,167;UBERON:0004111,3.89e-07,240;UBERON:0001310,6.50e-07,4;UBERON:0001135,7.41e-07,15;UBERON:0002100,7.45e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,3.65155045193687,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,2.03856641014312,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,3.3171948762061,5.26141062304515,0,0,0,0,0,0,0,6.4200789266625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,1.37304041038154,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@NLGN4Y-AS1}} | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38793 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000434164_5end | |||
|cluster_id=chrY:16915943..16915949,- | |||
|description=CAGE_peak_1_at_NLGN4Y-AS1_5end | |||
|id=chrY:16915943..16915949,- | |||
|ontology_enrichment_celltype=CL:0000359!6.89e-35!32;CL:0002595!2.85e-31!5;CL:0000192!3.35e-26!42;CL:0000514!3.35e-26!42;CL:0002593!4.04e-20!2;CL:0000187!5.14e-20!54;CL:0000680!7.11e-19!57;CL:0000056!7.11e-19!57;CL:0000355!7.11e-19!57;CL:0000183!3.53e-18!59;CL:0000393!7.57e-18!60;CL:0000211!7.57e-18!60;CL:0002539!1.09e-15!10;CL:0000222!1.28e-11!119;CL:0002566!1.77e-10!1;CL:0000569!2.15e-10!4;CL:0000011!2.15e-10!4;CL:0000055!2.14e-09!180;CL:0000220!2.53e-07!246;CL:0002321!3.04e-07!248;CL:0005020!3.05e-07!6;CL:0002138!3.05e-07!6;CL:0005022!3.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.78e-41;32!CL:0002595;3.56e-40;5!CL:0000192;3.27e-26;43!CL:0000187;1.03e-14;55!CL:0002589;2.45e-12;2!CL:0002593;3.24e-12;2!CL:0000393;9.88e-11;61!CL:0000211;9.88e-11;61!CL:0002539;8.09e-10;10!CL:0002592;1.40e-08;3!CL:0002594;6.50e-07;4!CL:0000569;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.14e-43,32;CL:0002595,4.35e-40,5;CL:0000192,1.63e-32,43;CL:0000514,1.63e-32,43;CL:0000187,2.03e-25,55;CL:0000680,4.21e-24,58;CL:0000056,4.21e-24,58;CL:0000355,4.21e-24,58;CL:0000393,6.49e-23,61;CL:0000211,6.49e-23,61;CL:0002589,2.59e-12,2;CL:0002593,3.62e-12,2;CL:0000222,1.78e-11,121;CL:0002539,7.74e-10,10;CL:0002592,1.30e-08,3;CL:0002594,6.50e-07,4;CL:0002321,8.32e-07,250;CL:0000569,9.63e-07,4;CL:0000011,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.27e-26;43!CL:0000355;6.01e-10;58!CL:0000011;9.63e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@NLGN4Y-AS1 | |||
}} |
Latest revision as of 17:02, 16 September 2015
Short description: | p1@NLGN4Y-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLGN4Y-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000434164_5end |
EntrezGene: | NA |
HGNC: | 38793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.14e-43 | 32 |
smooth muscle cell of the subclavian artery | 4.35e-40 | 5 |
smooth muscle cell | 1.63e-32 | 43 |
smooth muscle myoblast | 1.63e-32 | 43 |
muscle cell | 2.03e-25 | 55 |
muscle precursor cell | 4.21e-24 | 58 |
myoblast | 4.21e-24 | 58 |
multi-potent skeletal muscle stem cell | 4.21e-24 | 58 |
electrically responsive cell | 6.49e-23 | 61 |
electrically active cell | 6.49e-23 | 61 |
smooth muscle cell of the brachiocephalic vasculature | 2.59e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
mesodermal cell | 1.78e-11 | 121 |
aortic smooth muscle cell | 7.74e-10 | 10 |
smooth muscle cell of the coronary artery | 1.30e-08 | 3 |
smooth muscle cell of the umbilical artery | 6.50e-07 | 4 |
embryonic cell | 8.32e-07 | 250 |
cardiac mesenchymal cell | 9.63e-07 | 4 |
migratory trunk neural crest cell | 9.63e-07 | 4 |