FFCP PHASE1:Hg19::chr2:120301997..120302038,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:120301997..120302038,+ to FFCP PHASE1:Hg19::chr2:120301997..120302038,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=200373 | |EntrezGene=200373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0U5 | |UniProt=Q4G0U5 | ||
|association_with_transcript=0bp_to_ENST00000295220,ENST00000413369,ENST00000442513,ENST00000463985,NM_001029996_5end | |||
|cluster_id=chr2:120301997..120302038,+ | |||
|coexpression_cluster_id=C596 | |||
|description=CAGE_peak_1_at_PCDP1_5end | |||
|id=chr2:120301997..120302038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.45e-14;82!UBERON:0002532;5.08e-07;206!UBERON:0010316;5.08e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.10e-43!115;UBERON:0001049!5.88e-39!57;UBERON:0005068!5.88e-39!57;UBERON:0006241!5.88e-39!57;UBERON:0007135!5.88e-39!57;UBERON:0005743!6.85e-38!86;UBERON:0001017!7.64e-36!82;UBERON:0003075!5.30e-35!86;UBERON:0007284!5.30e-35!86;UBERON:0002616!6.46e-35!59;UBERON:0002346!6.52e-35!90;UBERON:0000073!1.02e-34!94;UBERON:0001016!1.02e-34!94;UBERON:0000955!8.70e-34!69;UBERON:0006238!8.70e-34!69;UBERON:0002780!1.35e-32!41;UBERON:0001890!1.35e-32!41;UBERON:0006240!1.35e-32!41;UBERON:0003080!2.56e-31!42;UBERON:0001893!3.91e-27!34;UBERON:0002020!4.69e-27!34;UBERON:0003528!4.69e-27!34;UBERON:0002791!2.64e-26!33;UBERON:0001869!5.45e-26!32;UBERON:0003056!7.49e-24!61;UBERON:0000956!1.55e-20!25;UBERON:0000203!1.55e-20!25;UBERON:0002619!2.00e-19!22;UBERON:0001950!8.89e-18!20;UBERON:0000033!3.17e-16!123;UBERON:0000153!3.52e-16!129;UBERON:0007811!3.52e-16!129;UBERON:0000924!1.13e-14!173;UBERON:0006601!1.13e-14!173;UBERON:0004121!2.57e-14!169;UBERON:0000475!2.64e-14!365;UBERON:0000025!1.99e-13!194;UBERON:0000062!2.40e-12!511;UBERON:0000483!2.78e-11!309;UBERON:0000481!3.59e-11!347;UBERON:0000119!8.77e-11!312;UBERON:0000064!1.81e-10!219;UBERON:0004111!2.20e-10!241;UBERON:0003076!8.53e-09!15;UBERON:0003057!8.53e-09!15;UBERON:0002420!4.31e-08!9;UBERON:0007245!4.31e-08!9;UBERON:0010009!4.31e-08!9;UBERON:0010011!4.31e-08!9;UBERON:0000454!4.31e-08!9;UBERON:0002308!6.14e-08!9;UBERON:0000125!6.14e-08!9;UBERON:0000468!6.43e-08!659;UBERON:0004732!1.41e-07!13;UBERON:0000477!1.74e-07!286;UBERON:0001871!2.70e-07!7;UBERON:0004733!6.11e-07!12;UBERON:0002028!6.11e-07!12;UBERON:0007277!6.11e-07!12;UBERON:0000480!6.92e-07!626;UBERON:0001894!7.87e-07!7;UBERON:0006222!7.87e-07!7;UBERON:0000467!9.14e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.95e-38;41!UBERON:0001890;3.95e-38;41!UBERON:0001869;1.26e-37;32!UBERON:0001893;1.41e-37;34!UBERON:0003528;1.62e-37;34!UBERON:0002020;1.62e-37;34!UBERON:0002791;4.02e-37;32!UBERON:0000073;3.73e-34;53!UBERON:0002616;3.73e-34;53!UBERON:0002619;1.82e-32;22!UBERON:0000956;2.83e-32;25!UBERON:0000203;2.83e-32;25!UBERON:0001950;1.28e-29;20!UBERON:0000955;9.43e-23;68!UBERON:0001017;1.02e-21;75!UBERON:0001016;1.06e-19;83!UBERON:0007023;1.84e-16;114!UBERON:0002420;7.26e-13;9!UBERON:0007245;7.26e-13;9!UBERON:0010009;7.26e-13;9!UBERON:0010011;7.26e-13;9!UBERON:0000454;7.26e-13;9!UBERON:0000125;1.31e-12;9!UBERON:0002308;1.31e-12;9!UBERON:0001894;1.22e-10;7!UBERON:0001871;3.37e-10;6!UBERON:0009663;3.39e-10;7!UBERON:0000200;6.14e-10;6!UBERON:0004732;9.88e-10;13!UBERON:0002298;2.31e-09;6!UBERON:0004733;1.11e-08;12!UBERON:0002028;1.11e-08;12!UBERON:0001872;1.51e-08;5!UBERON:0002021;1.61e-08;5!UBERON:0000349;1.63e-08;5!UBERON:0011216;7.32e-08;132!UBERON:0000369;2.62e-07;4!UBERON:0002435;2.62e-07;4!UBERON:0000204;2.62e-07;4!UBERON:0003296;4.70e-07;4!UBERON:0010133;4.70e-07;4!UBERON:0002784;9.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.93e-63,56;UBERON:0005068,1.93e-63,56;UBERON:0006241,1.93e-63,56;UBERON:0007135,1.93e-63,56;UBERON:0000073,6.74e-60,53;UBERON:0002616,6.74e-60,53;UBERON:0007023,2.78e-59,114;UBERON:0002780,3.60e-53,41;UBERON:0001890,3.60e-53,41;UBERON:0003080,3.60e-53,41;UBERON:0006240,3.60e-53,41;UBERON:0001017,2.95e-52,81;UBERON:0001016,8.35e-49,89;UBERON:0000955,3.36e-48,68;UBERON:0006238,3.36e-48,68;UBERON:0003075,5.16e-46,82;UBERON:0007284,5.16e-46,82;UBERON:0002346,1.19e-44,86;UBERON:0001893,1.08e-43,34;UBERON:0003528,1.47e-43,34;UBERON:0002020,1.47e-43,34;UBERON:0001869,1.08e-41,32;UBERON:0002791,5.09e-41,32;UBERON:0003056,1.87e-36,61;UBERON:0010371,1.69e-33,104;UBERON:0002619,1.76e-32,22;UBERON:0000956,3.03e-32,25;UBERON:0000203,3.03e-32,25;UBERON:0010314,2.97e-30,132;UBERON:0001950,1.29e-29,20;UBERON:0011216,1.34e-24,223;UBERON:0000025,9.67e-24,192;UBERON:0004121,6.08e-21,171;UBERON:0000924,6.08e-21,171;UBERON:0006601,6.08e-21,171;UBERON:0004111,1.15e-17,240;UBERON:0000483,7.36e-13,306;UBERON:0002420,7.55e-13,9;UBERON:0007245,7.55e-13,9;UBERON:0010009,7.55e-13,9;UBERON:0010011,7.55e-13,9;UBERON:0000454,7.55e-13,9;UBERON:0000125,1.39e-12,9;UBERON:0002308,1.39e-12,9;UBERON:0000119,1.65e-12,309;UBERON:0003076,1.11e-11,15;UBERON:0003057,1.11e-11,15;UBERON:0001894,1.12e-10,7;UBERON:0006222,1.12e-10,7;UBERON:0001871,3.23e-10,6;UBERON:0009663,3.77e-10,7;UBERON:0000200,6.14e-10,6;UBERON:0004732,1.19e-09,13;UBERON:0002298,2.19e-09,6;UBERON:0004733,1.33e-08,12;UBERON:0002028,1.33e-08,12;UBERON:0007277,1.33e-08,12;UBERON:0000349,1.44e-08,5;UBERON:0001872,1.58e-08,5;UBERON:0002021,1.65e-08,5;UBERON:0000369,2.71e-07,4;UBERON:0002435,2.71e-07,4;UBERON:0000204,2.71e-07,4;UBERON:0010082,2.71e-07,4;UBERON:0003296,4.09e-07,4;UBERON:0010133,4.09e-07,4;UBERON:0000922,9.14e-07,592;UBERON:0002784,9.28e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,1.71741592278634,0.821246550437305,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.44575660953827,0.50133791063589,3.33146993609895,0.795285947051099,0.973269740605272,0.0945348171640679,0,0.263504357079378,15.5865099842278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.635795703478686,0,0.309157587715317,0.515281080091258,0.930584281657949,0,0.0974370051611986,0.757301322732344,0.368199594569197,0,0,0.302256294682921,0,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.414644220061482,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,7.86261773342101,3.54473944008842,0,1.22988438543114,0,0.109750285408626,0,0,0,0,0,0,0.579652024875384,0.352226082707465,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,1.59956785891291,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,2.60279707715243,0,1.17261385734044,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.844413031143006,0,0,0.647747748306418,0,1.08378575017541,1.00337954770971,1.52925763827023,0,1.11937377361089,0,0,0.769350375349168,0.984043937099117,1.30151357865721,1.64865618636356,0,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0.15350367472613,0,0.322260734604821,0.145016693914229,0.255679882248303,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,2.7774258493143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,3.27673408723686,0,1.13654458722565,0,0,0,19.882952955326,6.6114625712941,0,0,2.74463030566391,3.78571177677032,0.552567831062295,0.503865495708552,0,0,0,0,0.716084698702437,0.511572370226872,0.394573622547734,0,0,5.81599647657131,8.90573742353772,3.99227596002388,0,0,0,0,0,1.18193840883968,0.344743373241465,0.291604613383254,1.90987494426621,19.4863104879045,10.7330830376613,6.10326945268333,1.10579259931225,4.13766666534966,11.1886552548526,0.10893846351899,0.139423744278603,1.23120413606075,0.455768223388005,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,3.16497096792041,3.91758739581955,0.141353071433941,0,0,1.14994833854341,0.611030144933625,0.593042257361244,0.247127877893006,0,6.53790989912567,0,4.45102446878144,0,0.586993856796269,1.69946265673865,1.18375320854817,1.20990716048664,4.89716418608784,6.12909822396333,0,0,0,0.330991955875499,0.627865836814451,0,2.84609546029793,0,0.173559738335131,0.195984794828755,0,8.91106008034354,0,0,0,0,0.387956065953678,0.176512253383001,4.06765333404958,0,0,12.7887807830875,4.10657903743086,0.561111741760736,4.26905989478705,0,0.144090417154106,1.03082936549324,0,0,0.621262677827163,2.12124631155116,0.543616824294456,0.627617077873999,0,0,6.60462317580768,3.01191833562385,0,0,0,1.67569440763353,1.83328339209347,0.717873024576814,1.19807400299395,0.858452096273142,0.89268582976749,2.41860500952215,0,2.32991899054908,0,0,0.0674035438541849,1.47641222272123,0,19.8807422452326,9.39803502169872,0.643012593860077,0,0,0,0,12.8789060115012,0,7.17131936422703,5.4028225779048,0,0,0,2.1440859791201,1.32418394073086,0.5085370753095,0,0.864221491201268,0,0,0,0,0.113312091520126,1.90517903781507,0,10.8597683343702,4.36367585750877,0.171086837884329,0,7.68869370487402,21.8513984088536,9.1132592176383,0,0.197611631897944,0,0,1.63205341010842,1.7548292581589,3.982492497925,0.983617892129413,1.09937867375164,16.8352954193727,13.9109941988238,8.76336514945499,25.8034138060532,9.65082748370615,9.0039784265006,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0.899606224327209,0.465788870628778,0,0,0,1.20206087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| ||
|short_description=p1@PCDP1 | |||
}} | }} |
Latest revision as of 17:02, 16 September 2015
Short description: | p1@PCDP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDP1_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | 0bp_to_ENST00000295220, ENST00000413369, ENST00000442513, ENST00000463985, NM_001029996_5end |
EntrezGene: | PCDP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data