FFCP PHASE1:Hg19::chr16:4588822..4588834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29965 | |EntrezGene=29965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13234 | |HGNC=13234 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H305,B4DFU1,B4DY75 | |UniProt=Q9H305,B4DFU1,B4DY75 | ||
|association_with_transcript=-6bp_to_ENST00000399599,NM_001199055,NM_001199056,NM_013399,uc002cww.2,uc010btu.2,uc010uxl.1,uc010uxm.1_5end | |association_with_transcript=-6bp_to_ENST00000399599,NM_001199055,NM_001199056,NM_013399,uc002cww.2,uc010btu.2,uc010uxl.1,uc010uxm.1_5end | ||
|cluster_id=chr16:4588822..4588834,- | |||
|description=CAGE_peak_4_at_C16orf5_5end | |description=CAGE_peak_4_at_C16orf5_5end | ||
|id=chr16:4588822..4588834,- | |id=chr16:4588822..4588834,- | ||
|ontology_enrichment_celltype=CL:0000988!6.25e-12!182;CL:0000037!1.21e-11!172;CL:0000566!1.21e-11!172;CL:0000738!1.55e-10!140;CL:0002032!1.94e-10!165;CL:0000837!1.94e-10!165;CL:0002087!4.39e-09!119;CL:0002031!1.66e-08!124;CL:0000763!4.31e-08!112;CL:0000049!4.31e-08!112;CL:0000557!2.66e-07!71;CL:0000766!6.07e-07!76;CL:0002009!7.67e-07!65 | |ontology_enrichment_celltype=CL:0000988!6.25e-12!182;CL:0000037!1.21e-11!172;CL:0000566!1.21e-11!172;CL:0000738!1.55e-10!140;CL:0002032!1.94e-10!165;CL:0000837!1.94e-10!165;CL:0002087!4.39e-09!119;CL:0002031!1.66e-08!124;CL:0000763!4.31e-08!112;CL:0000049!4.31e-08!112;CL:0000557!2.66e-07!71;CL:0000766!6.07e-07!76;CL:0002009!7.67e-07!65 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.62e-14,177;CL:0000037,2.21e-14,168;CL:0002032,3.63e-13,161;CL:0000837,3.63e-13,161;CL:0000738,3.32e-12,136;CL:0002087,5.73e-11,115;CL:0002031,2.17e-10,120;CL:0000763,1.01e-09,108;CL:0000049,1.01e-09,108;CL:0000557,4.01e-08,67;CL:0002009,1.22e-07,61;CL:0000766,1.68e-07,72;CL:0000839,2.15e-07,66;CL:0002194,2.93e-07,59;CL:0000576,2.93e-07,59;CL:0000040,2.93e-07,59;CL:0000559,2.93e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.93e-15!94;UBERON:0001016!2.93e-15!94;UBERON:0005743!2.93e-14!86;UBERON:0001017!4.43e-14!82;UBERON:0001049!1.07e-13!57;UBERON:0005068!1.07e-13!57;UBERON:0006241!1.07e-13!57;UBERON:0007135!1.07e-13!57;UBERON:0002616!5.57e-13!59;UBERON:0003075!5.91e-13!86;UBERON:0007284!5.91e-13!86;UBERON:0000955!8.06e-13!69;UBERON:0006238!8.06e-13!69;UBERON:0002346!1.59e-12!90;UBERON:0002780!3.24e-11!41;UBERON:0001890!3.24e-11!41;UBERON:0006240!3.24e-11!41;UBERON:0003056!5.36e-11!61;UBERON:0003080!7.20e-11!42;UBERON:0001869!8.61e-10!32;UBERON:0002020!1.09e-09!34;UBERON:0003528!1.09e-09!34;UBERON:0007023!1.60e-09!115;UBERON:0001893!1.76e-09!34;UBERON:0002791!5.14e-09!33;UBERON:0002390!4.24e-08!102;UBERON:0003061!4.24e-08!102;UBERON:0000153!1.74e-07!129;UBERON:0007811!1.74e-07!129;UBERON:0002619!5.27e-07!22;UBERON:0002193!7.26e-07!112;UBERON:0000033!7.53e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.06e-10;32!UBERON:0003528;2.12e-09;34!UBERON:0002020;2.12e-09;34!UBERON:0001893;2.78e-09;34!UBERON:0002780;4.41e-09;41!UBERON:0001890;4.41e-09;41!UBERON:0002791;6.01e-09;32!UBERON:0000073;2.48e-08;53!UBERON:0002616;2.48e-08;53!UBERON:0002619;1.36e-07;22!UBERON:0000955;1.54e-07;68!UBERON:0001017;3.75e-07;75!UBERON:0001950;4.24e-07;20!UBERON:0000956;5.35e-07;25!UBERON:0000203;5.35e-07;25!UBERON:0001016;9.43e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-16,89;UBERON:0001017,1.91e-15,81;UBERON:0001049,3.68e-15,56;UBERON:0005068,3.68e-15,56;UBERON:0006241,3.68e-15,56;UBERON:0007135,3.68e-15,56;UBERON:0000073,6.98e-15,53;UBERON:0002616,6.98e-15,53;UBERON:0000955,2.95e-14,68;UBERON:0006238,2.95e-14,68;UBERON:0003075,1.54e-12,82;UBERON:0007284,1.54e-12,82;UBERON:0002346,3.36e-12,86;UBERON:0002780,5.29e-12,41;UBERON:0001890,5.29e-12,41;UBERON:0003080,5.29e-12,41;UBERON:0006240,5.29e-12,41;UBERON:0003056,2.38e-11,61;UBERON:0001869,1.70e-10,32;UBERON:0003528,2.99e-10,34;UBERON:0002020,2.99e-10,34;UBERON:0007023,3.09e-10,114;UBERON:0001893,5.09e-10,34;UBERON:0002390,2.51e-09,98;UBERON:0003061,2.51e-09,98;UBERON:0002791,2.72e-09,32;UBERON:0010371,1.77e-08,104;UBERON:0002619,1.09e-07,22;UBERON:0002193,1.18e-07,108;UBERON:0002405,3.72e-07,93;UBERON:0002371,5.60e-07,76;UBERON:0001950,5.85e-07,20;UBERON:0001474,6.08e-07,82;UBERON:0000956,8.84e-07,25;UBERON:0000203,8.84e-07,25 | |||
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| ||
|short_description=p4@C16orf5 | |short_description=p4@C16orf5 | ||
}} | }} |
Latest revision as of 16:58, 16 September 2015
Short description: | p4@C16orf5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C16orf5_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000399599, NM_001199055, NM_001199056, NM_013399, uc002cww.2, uc010btu.2, uc010uxl.1, uc010uxm.1_5end |
EntrezGene: | C16orf5 |
HGNC: | 13234 |
UniProt: | Q9H305B4DFU1B4DY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.62e-14 | 177 |
hematopoietic stem cell | 2.21e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-13 | 161 |
leukocyte | 3.32e-12 | 136 |
nongranular leukocyte | 5.73e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.17e-10 | 120 |
myeloid cell | 1.01e-09 | 108 |
common myeloid progenitor | 1.01e-09 | 108 |
granulocyte monocyte progenitor cell | 4.01e-08 | 67 |
macrophage dendritic cell progenitor | 1.22e-07 | 61 |
myeloid leukocyte | 1.68e-07 | 72 |
myeloid lineage restricted progenitor cell | 2.15e-07 | 66 |
monopoietic cell | 2.93e-07 | 59 |
monocyte | 2.93e-07 | 59 |
monoblast | 2.93e-07 | 59 |
promonocyte | 2.93e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.25e-16 | 89 |
central nervous system | 1.91e-15 | 81 |
neural tube | 3.68e-15 | 56 |
neural rod | 3.68e-15 | 56 |
future spinal cord | 3.68e-15 | 56 |
neural keel | 3.68e-15 | 56 |
regional part of nervous system | 6.98e-15 | 53 |
regional part of brain | 6.98e-15 | 53 |
brain | 2.95e-14 | 68 |
future brain | 2.95e-14 | 68 |
neural plate | 1.54e-12 | 82 |
presumptive neural plate | 1.54e-12 | 82 |
neurectoderm | 3.36e-12 | 86 |
regional part of forebrain | 5.29e-12 | 41 |
forebrain | 5.29e-12 | 41 |
anterior neural tube | 5.29e-12 | 41 |
future forebrain | 5.29e-12 | 41 |
pre-chordal neural plate | 2.38e-11 | 61 |
cerebral hemisphere | 1.70e-10 | 32 |
brain grey matter | 2.99e-10 | 34 |
gray matter | 2.99e-10 | 34 |
adult organism | 3.09e-10 | 114 |
telencephalon | 5.09e-10 | 34 |
hematopoietic system | 2.51e-09 | 98 |
blood island | 2.51e-09 | 98 |
regional part of telencephalon | 2.72e-09 | 32 |
ecto-epithelium | 1.77e-08 | 104 |
regional part of cerebral cortex | 1.09e-07 | 22 |
hemolymphoid system | 1.18e-07 | 108 |
immune system | 3.72e-07 | 93 |
bone marrow | 5.60e-07 | 76 |
neocortex | 5.85e-07 | 20 |
bone element | 6.08e-07 | 82 |
cerebral cortex | 8.84e-07 | 25 |
pallium | 8.84e-07 | 25 |