FFCP PHASE1:Hg19::chr2:27545446..27545457,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:27545446..27545457,-
|short_description=p5@MPV17
|description=CAGE_peak_5_at_MPV17_5end
|association_with_transcript=-15bp_to_ENST00000233545,uc002rjr.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4358 | |EntrezGene=4358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7224 | |HGNC=7224 | ||
|TSSclassifier=strong | |||
|UniProt=P39210 | |UniProt=P39210 | ||
|association_with_transcript=-15bp_to_ENST00000233545,uc002rjr.2_5end | |||
|cluster_id=chr2:27545446..27545457,- | |||
|description=CAGE_peak_5_at_MPV17_5end | |||
|id=chr2:27545446..27545457,- | |||
|ontology_enrichment_celltype=CL:0000066!6.17e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.08e-17;5!CL:0002591;2.91e-12;1!CL:0000990;5.42e-12;8!CL:0000451;6.56e-10;10!CL:0000235;1.91e-08;6!CL:0002159;1.14e-07;14!CL:0000650;9.27e-07;2!CL:1000500;9.27e-07;2!CL:1000618;9.27e-07;2!CL:1001318;9.27e-07;2!CL:0000575;9.27e-07;2!CL:0002561;9.27e-07;2!CL:0002363;9.27e-07;2!CL:0002173;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0002591,3.85e-12,1;CL:0000990,5.23e-12,8;CL:0000451,6.37e-10,10;CL:0000235,1.87e-08,6;CL:0002159,1.16e-07,14;CL:0000650,7.61e-07,2;CL:1000500,7.61e-07,2;CL:1000618,7.61e-07,2;CL:1001318,7.61e-07,2;CL:0002173,7.61e-07,2;CL:0000575,9.02e-07,2;CL:0002561,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.27e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;7.11e-12;4!UBERON:0000964;7.11e-12;4!UBERON:0010409;7.11e-12;4!UBERON:0010313;2.06e-10;10!UBERON:0003566;9.27e-07;2!UBERON:0000078;9.27e-07;2!UBERON:0003567;9.27e-07;2!UBERON:0003838;9.27e-07;2!UBERON:0003586;9.27e-07;2!UBERON:0005169;9.27e-07;2!UBERON:0005933;9.27e-07;2!UBERON:0002321;9.27e-07;2!UBERON:0001777;9.27e-07;2!UBERON:0002012;9.27e-07;2!UBERON:0005942;9.27e-07;2!UBERON:0005215;9.27e-07;2!UBERON:0002303;9.27e-07;2!UBERON:0008886;9.27e-07;2!UBERON:0002319;9.27e-07;2!UBERON:0005932;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,7.12e-12,4;UBERON:0000964,8.39e-12,4;UBERON:0010409,8.39e-12,4;UBERON:0004348,8.39e-12,4;UBERON:0005427,8.39e-12,4;UBERON:0010313,2.47e-10,10;UBERON:0002342,2.47e-10,10;UBERON:0005062,2.47e-10,10;UBERON:0003567,7.61e-07,2;UBERON:0003838,7.61e-07,2;UBERON:0003586,7.61e-07,2;UBERON:0005169,7.61e-07,2;UBERON:0002321,7.61e-07,2;UBERON:0005215,7.61e-07,2;UBERON:0002303,7.61e-07,2;UBERON:0002319,7.61e-07,2;UBERON:0005933,9.54e-07,2;UBERON:0005942,9.54e-07,2;UBERON:0005932,9.54e-07,2 | |||
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| ||
|short_description=p5@MPV17 | |||
}} | }} |
Latest revision as of 16:54, 16 September 2015
Short description: | p5@MPV17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MPV17_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000233545, uc002rjr.2_5end |
EntrezGene: | MPV17 |
HGNC: | 7224 |
UniProt: | P39210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
smooth muscle cell of the pulmonary artery | 3.85e-12 | 1 |
conventional dendritic cell | 5.23e-12 | 8 |
dendritic cell | 6.37e-10 | 10 |
macrophage | 1.87e-08 | 6 |
general ecto-epithelial cell | 1.16e-07 | 14 |
mesangial cell | 7.61e-07 | 2 |
kidney interstitial cell | 7.61e-07 | 2 |
juxtaglomerular complex cell | 7.61e-07 | 2 |
renal interstitial pericyte | 7.61e-07 | 2 |
extraglomerular mesangial cell | 7.61e-07 | 2 |
corneal epithelial cell | 9.02e-07 | 2 |
outer root sheath cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 7.12e-12 | 4 |
cornea | 8.39e-12 | 4 |
eye surface | 8.39e-12 | 4 |
optic eminence | 8.39e-12 | 4 |
corneal primordium | 8.39e-12 | 4 |
neural crest-derived structure | 2.47e-10 | 10 |
neural crest | 2.47e-10 | 10 |
neural fold | 2.47e-10 | 10 |
abdomen connective tissue | 7.61e-07 | 2 |
abdominal segment connective tissue | 7.61e-07 | 2 |
trunk connective tissue | 7.61e-07 | 2 |
interstitial tissue | 7.61e-07 | 2 |
extraglomerular mesangium | 7.61e-07 | 2 |
kidney interstitium | 7.61e-07 | 2 |
juxtaglomerular apparatus | 7.61e-07 | 2 |
mesangium | 7.61e-07 | 2 |
hair root sheath | 9.54e-07 | 2 |
hair outer root sheath | 9.54e-07 | 2 |
bulb of hair follicle | 9.54e-07 | 2 |