FFCP PHASE1:Hg19::chr16:4545853..4545864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3163 | |EntrezGene=3163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5014 | |HGNC=5014 | ||
|TSSclassifier=strong | |||
|UniProt=P30519 | |UniProt=P30519 | ||
|association_with_transcript=0bp_to_ENST00000398595,ENST00000414777,NM_001127205,uc002cwt.2,uc010btt.2_5end | |association_with_transcript=0bp_to_ENST00000398595,ENST00000414777,NM_001127205,uc002cwt.2,uc010btt.2_5end | ||
|cluster_id=chr16:4545853..4545864,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_HMOX2_5end | |description=CAGE_peak_3_at_HMOX2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002549!1.21e-13!2;CL:0000842!1.81e-09!3;CL:0000224!2.04e-07!4 | |ontology_enrichment_celltype=CL:0002549!1.21e-13!2;CL:0000842!1.81e-09!3;CL:0000224!2.04e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease=DOID:5409!1.92e-07!4 | |ontology_enrichment_disease=DOID:5409!1.92e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.63e-36!11;UBERON:0006947!7.70e-34!3;UBERON:0004054!7.70e-34!3;UBERON:0001301!4.61e-26!1;UBERON:0001000!5.93e-26!1;UBERON:0005352!5.93e-26!1;UBERON:0005904!1.11e-25!4;UBERON:0003101!1.45e-18!22;UBERON:0000079!1.45e-18!22;UBERON:0003947!1.21e-13!2;UBERON:0005629!1.21e-13!2;UBERON:0005358!1.21e-13!2;UBERON:0001886!1.21e-13!2;UBERON:0004086!1.21e-13!2;UBERON:0005282!1.21e-13!2;UBERON:0005281!1.21e-13!2;UBERON:0000473!1.51e-13!8;UBERON:0002300!1.54e-09!3;UBERON:0003133!9.37e-09!48;UBERON:0005156!3.45e-07!59;UBERON:0000990!3.45e-07!59 | |ontology_enrichment_uberon=UBERON:0003135!1.63e-36!11;UBERON:0006947!7.70e-34!3;UBERON:0004054!7.70e-34!3;UBERON:0001301!4.61e-26!1;UBERON:0001000!5.93e-26!1;UBERON:0005352!5.93e-26!1;UBERON:0005904!1.11e-25!4;UBERON:0003101!1.45e-18!22;UBERON:0000079!1.45e-18!22;UBERON:0003947!1.21e-13!2;UBERON:0005629!1.21e-13!2;UBERON:0005358!1.21e-13!2;UBERON:0001886!1.21e-13!2;UBERON:0004086!1.21e-13!2;UBERON:0005282!1.21e-13!2;UBERON:0005281!1.21e-13!2;UBERON:0000473!1.51e-13!8;UBERON:0002300!1.54e-09!3;UBERON:0003133!9.37e-09!48;UBERON:0005156!3.45e-07!59;UBERON:0000990!3.45e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p3@HMOX2 | |short_description=p3@HMOX2 | ||
}} | }} |
Latest revision as of 16:48, 16 September 2015
Short description: | p3@HMOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMOX2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000398595, ENST00000414777, NM_001127205, uc002cwt.2, uc010btt.2_5end |
EntrezGene: | HMOX2 |
HGNC: | 5014 |
UniProt: | P30519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |