FFCP PHASE1:Hg19::chr20:46415341..46415360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |EntrezGene=55959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |HGNC=20392 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAE6,Q8IWU5 | |UniProt=G3XAE6,Q8IWU5 | ||
|association_with_transcript=0bp_to_ENST00000361612,ENST00000484875,NM_001161841,NM_198596,uc002xtq.2,uc002xtr.2_5end | |association_with_transcript=0bp_to_ENST00000361612,ENST00000484875,NM_001161841,NM_198596,uc002xtq.2,uc002xtr.2_5end | ||
|cluster_id=chr20:46415341..46415360,- | |||
|coexpression_cluster_id=C1870 | |||
|description=CAGE_peak_12_at_SULF2_5end | |description=CAGE_peak_12_at_SULF2_5end | ||
|id=chr20:46415341..46415360,- | |id=chr20:46415341..46415360,- | ||
|ontology_enrichment_celltype=CL:0002057!2.07e-15!42;CL:0000860!2.13e-13!45;CL:0002139!2.33e-11!24;CL:0000115!3.65e-09!35;CL:0002194!4.75e-09!63;CL:0000576!4.75e-09!63;CL:0000040!4.75e-09!63;CL:0000559!4.75e-09!63;CL:0002009!2.34e-08!65;CL:0000766!3.27e-08!76;CL:0000071!7.26e-08!18;CL:0002546!7.26e-08!18;CL:0000839!1.05e-07!70;CL:0002078!1.21e-07!44;CL:0000557!5.48e-07!71 | |ontology_enrichment_celltype=CL:0002057!2.07e-15!42;CL:0000860!2.13e-13!45;CL:0002139!2.33e-11!24;CL:0000115!3.65e-09!35;CL:0002194!4.75e-09!63;CL:0000576!4.75e-09!63;CL:0000040!4.75e-09!63;CL:0000559!4.75e-09!63;CL:0002009!2.34e-08!65;CL:0000766!3.27e-08!76;CL:0000071!7.26e-08!18;CL:0002546!7.26e-08!18;CL:0000839!1.05e-07!70;CL:0002078!1.21e-07!44;CL:0000557!5.48e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.06e-09;36!CL:0002139;6.55e-09;24!CL:0000784;8.50e-09;3!CL:0002144;2.11e-08;3!CL:0000875;5.12e-08;3!CL:0002396;5.12e-08;3!CL:0002138;1.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.78e-12,42;CL:0002057,3.78e-12,42;CL:0000115,3.80e-11,36;CL:0002194,7.89e-11,59;CL:0000576,7.89e-11,59;CL:0000040,7.89e-11,59;CL:0000559,7.89e-11,59;CL:0002009,2.51e-10,61;CL:0000766,3.61e-10,72;CL:0002393,3.70e-10,9;CL:0002397,3.70e-10,9;CL:0000473,3.92e-10,48;CL:0000234,3.92e-10,48;CL:0000839,3.30e-09,66;CL:0000557,5.27e-09,67;CL:0002139,7.07e-09,24;CL:0000784,1.12e-08,3;CL:0002144,1.88e-08,3;CL:0000875,1.93e-08,3;CL:0002396,1.93e-08,3;CL:0002078,2.98e-08,45;CL:0005020,1.10e-07,6;CL:0002138,1.10e-07,6;CL:0005022,1.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-08;42!CL:0005022;1.37e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;2.05e-07;4!DOID:1612;2.05e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.07e-07,4;DOID:1612,2.07e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.08e-14!659;UBERON:0000467!4.82e-10!625;UBERON:0000480!6.57e-10!626;UBERON:0000922!8.77e-10!612;UBERON:0002050!5.11e-09!605;UBERON:0005423!5.11e-09!605;UBERON:0007023!5.17e-09!115;UBERON:0000923!9.99e-09!604;UBERON:0005291!9.99e-09!604;UBERON:0006598!9.99e-09!604;UBERON:0002532!9.99e-09!604;UBERON:0001986!7.26e-08!18;UBERON:0004638!7.26e-08!18;UBERON:0004852!7.26e-08!18;UBERON:0000062!1.41e-07!511;UBERON:0000955!4.86e-07!69;UBERON:0006238!4.86e-07!69;UBERON:0005743!5.29e-07!86;UBERON:0001017!5.68e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.11e-08;3!UBERON:0001915;2.11e-08;3!UBERON:0001982;2.11e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.44e-09,93;UBERON:0010523,1.88e-08,3;UBERON:0001915,1.88e-08,3;UBERON:0001982,1.88e-08,3;UBERON:0002193,2.01e-08,108;UBERON:0002371,1.99e-07,76 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,1.56727360739044,1.14494394852423,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,1.18009283054671,1.53531759238885,0.77408061658038,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0.872389432677388,2.64513160582167,0.727752183563449,0.232429036905685,0.822335776043652,0.929119112685311,0.28769239232215,0.512321413058201,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0.941211697713023,1.63743690034707,0.449446968890169,0.306083892370903,0.962787081228281,1.91801137739712,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,3.97169657283798,0,1.25624332628372,0,0.434377689410233,0,0,0.632924774881769,3.38008458099107,2.97646019951061,1.25795187305026,4.71780250815279,2.55300717830561,1.92870704036496,1.99508920618874,1.79025009479181,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0.722878304769133,2.00535164254356,0.579386075843295,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0.523916301990851,0.364295288292542,0,1.9472843619281,1.21890816109487,0.930705723632056,1.43094374583205,2.28797964312051,2.22874500797739,0.39752481473341,0.860234595106124,1.73570250803797,1.13061588384802,0.419499436209906,0.825354125820202,1.04497483268405,2.32575083252396,1.77883131343355,3.3472061276467,1.61131726843659,1.52054421143703,2.19655851793353,0.367663080345869,0.81014194788176,0.982297011124877,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0.311211035399766,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,1.49490172172997,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.460249493211497,0,0.355009592516614,0.302256294682921,0,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59602091012043,0,2.4694440679884,0,0,0,0,0,0.122988438543114,0,0.768251997860379,0,0.201057944823262,1.29623823221941,0,0,0,0.231860809950154,0.117408694235822,0.433099343283221,2.31492756288305,0.380508304469197,17.3844967551041,20.6036678902769,0,0,0,0,0.671928512795438,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.428933980974443,1.62786481617433,2.46972101034231,0,0,0.791951872933429,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0.502548796003046,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,1.07857100409308,0.213455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,0.61384789315225,0,0,1.53512174720011,0,0,0,0.177561725313127,0,0,0,0,1.60405176242628,0,0.114814448164607,0,0,0,0,0,0,0.211103257785751,4.54933536283586,2.38131187387122,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0,0,0,0,0,1.95018073810956,0,0.290012154876366,0,0,0,0.429680979473094,0.145016693914229,0,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0,0,0,1.58625035258854,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,1.18785872333055,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,1.99613798001194,8.07326059364223,0,0,0,0,0,0,0,0.520874984799877,0,0.241192877250816,0,0.442317039724898,0.591095237907095,0.438770794307945,0,0,1.38510465306835,1.48124672601102,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,1.89559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0.881931576729399,1.91530254476886,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0.316553979779393,0.195551382734803,0,0,0.599428828746391,0.144090417154106,0.114536596165916,0,0.14405479798815,0,0,0.543616824294456,0.313808538937,0.611989305817931,0,0.600420288709789,0.273810757783986,0,0,0,0,0.916641696046735,0.717873024576814,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0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| ||
|short_description=p12@SULF2 | |short_description=p12@SULF2 | ||
}} | }} |
Latest revision as of 16:47, 16 September 2015
Short description: | p12@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SULF2_5end |
Coexpression cluster: | C1870_MCF7_breast_lung_Endothelial_CD14_Dendritic_Hepatic |
Association with transcript: | 0bp_to_ENST00000361612, ENST00000484875, NM_001161841, NM_198596, uc002xtq.2, uc002xtr.2_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | G3XAE6Q8IWU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.78e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.78e-12 | 42 |
endothelial cell | 3.80e-11 | 36 |
monopoietic cell | 7.89e-11 | 59 |
monocyte | 7.89e-11 | 59 |
monoblast | 7.89e-11 | 59 |
promonocyte | 7.89e-11 | 59 |
macrophage dendritic cell progenitor | 2.51e-10 | 61 |
myeloid leukocyte | 3.61e-10 | 72 |
intermediate monocyte | 3.70e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.70e-10 | 9 |
defensive cell | 3.92e-10 | 48 |
phagocyte | 3.92e-10 | 48 |
myeloid lineage restricted progenitor cell | 3.30e-09 | 66 |
granulocyte monocyte progenitor cell | 5.27e-09 | 67 |
endothelial cell of vascular tree | 7.07e-09 | 24 |
plasmacytoid dendritic cell | 1.12e-08 | 3 |
capillary endothelial cell | 1.88e-08 | 3 |
non-classical monocyte | 1.93e-08 | 3 |
CD14-low, CD16-positive monocyte | 1.93e-08 | 3 |
meso-epithelial cell | 2.98e-08 | 45 |
lymphangioblast | 1.10e-07 | 6 |
endothelial cell of lymphatic vessel | 1.10e-07 | 6 |
vascular lymphangioblast | 1.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.44e-09 | 93 |
microcirculatory vessel | 1.88e-08 | 3 |
endothelium of capillary | 1.88e-08 | 3 |
capillary | 1.88e-08 | 3 |
hemolymphoid system | 2.01e-08 | 108 |
bone marrow | 1.99e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.07e-07 | 4 |
breast cancer | 2.07e-07 | 4 |