FFCP PHASE1:Hg19::chr20:46415297..46415334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |EntrezGene=55959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |HGNC=20392 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWU5 | |UniProt=Q8IWU5 | ||
|association_with_transcript=0bp_to_ENST00000359930,ENST00000467815_5end | |association_with_transcript=0bp_to_ENST00000359930,ENST00000467815_5end | ||
|cluster_id=chr20:46415297..46415334,- | |||
|coexpression_cluster_id=C1870 | |||
|description=CAGE_peak_4_at_SULF2_5end | |description=CAGE_peak_4_at_SULF2_5end | ||
|id=chr20:46415297..46415334,- | |id=chr20:46415297..46415334,- | ||
|ontology_enrichment_celltype=CL:0002057!4.49e-16!42;CL:0000860!1.08e-13!45;CL:0000766!4.00e-10!76;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0002139!5.63e-08!24;CL:0002009!6.51e-08!65;CL:0000557!4.84e-07!71 | |ontology_enrichment_celltype=CL:0002057!4.49e-16!42;CL:0000860!1.08e-13!45;CL:0000766!4.00e-10!76;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0002139!5.63e-08!24;CL:0002009!6.51e-08!65;CL:0000557!4.84e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.73e-13;33!CL:0002057;6.73e-13;33!CL:0000576;4.60e-10;48!CL:0002139;6.39e-09;24!CL:0000473;8.24e-09;39!CL:0000234;8.24e-09;39!CL:0000766;2.03e-08;69!CL:0000115;6.32e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-19,42;CL:0002057,2.43e-19,42;CL:0000766,2.66e-17,72;CL:0000473,2.08e-16,48;CL:0000234,2.08e-16,48;CL:0002194,6.85e-15,59;CL:0000576,6.85e-15,59;CL:0000040,6.85e-15,59;CL:0000559,6.85e-15,59;CL:0002009,5.40e-14,61;CL:0000557,1.36e-12,67;CL:0000839,5.15e-12,66;CL:0002139,1.03e-08,24;CL:0000115,1.08e-08,36;CL:0002393,9.09e-08,9;CL:0002397,9.09e-08,9;CL:0000763,1.42e-07,108;CL:0000049,1.42e-07,108;CL:0000094,4.03e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.01e-18!659;UBERON:0000467!7.73e-15!625;UBERON:0000480!1.26e-14!626;UBERON:0007023!5.77e-13!115;UBERON:0000062!3.87e-11!511;UBERON:0000922!7.93e-11!612;UBERON:0002050!6.36e-10!605;UBERON:0005423!6.36e-10!605;UBERON:0000923!1.47e-09!604;UBERON:0005291!1.47e-09!604;UBERON:0006598!1.47e-09!604;UBERON:0002532!1.47e-09!604;UBERON:0001017!5.54e-08!82;UBERON:0005743!1.08e-07!86;UBERON:0002193!5.14e-07!112;UBERON:0004121!5.24e-07!169;UBERON:0000073!5.91e-07!94;UBERON:0001016!5.91e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.39e-13,108;UBERON:0002405,1.08e-11,93;UBERON:0002371,2.60e-10,76;UBERON:0002390,8.06e-10,98;UBERON:0003061,8.06e-10,98;UBERON:0001474,1.03e-08,82;UBERON:0003081,1.90e-08,203;UBERON:0002050,8.09e-08,564;UBERON:0004765,1.54e-07,90;UBERON:0000923,2.41e-07,560;UBERON:0010316,2.41e-07,560;UBERON:0005291,2.41e-07,560;UBERON:0006598,2.41e-07,560;UBERON:0010317,2.41e-07,560;UBERON:0002532,2.41e-07,560;UBERON:0000922,3.33e-07,592;UBERON:0005423,4.56e-07,581;UBERON:0001434,4.89e-07,100 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0,0,0,0,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0.861847406537515,0,2.82109249330279,1.43117993565528,1.50561867580173,0.502170558379211,0.0764134057479513,0.0821005894499457,0,1.96682138424452,1.53531759238885,2.63187409637329,0.919421224478927,1.204823675113,0,0,0,0,1.10799081706375,1.00272223735071,3.03815219002193,0,0,0,2.18097358169347,2.64513160582167,1.21292030593908,2.32429036905685,2.05583944010913,0.619412741790207,0.28769239232215,1.2808035326455,0.47296445977717,1.37898272294647,5.16387746867061,0,2.07066573496865,2.72906150057846,1.79778787556068,3.67300670845083,4.8139354061414,2.55734850319616,0.659702600373432,1.79517291859469,1.27867425159808,1.16083695451434,2.26954089876456,0.622822248995575,2.26123798731069,0.521482918420201,1.3031330682307,1.21079900526674,4.05105399586321,1.26584954976354,4.43636101255078,2.97646019951061,2.51590374610051,5.61643155732475,3.30389164251314,5.30394436100364,3.70516566863623,1.79025009479181,2.00930569141097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,2.68280343881454,0.895037932904712,0.722878304769133,3.50936537445123,2.17269778441236,1.5905718941022,2.91980922181582,0.378139268656271,0,0.527008714158756,2.03017567021455,0.728590576585084,0.741568885568859,2.59637914923747,1.91542711029194,1.72845348674525,13.5939655854045,7.43593384014166,9.65789503456869,1.78886166630035,3.4409383804245,1.04142150482278,1.13061588384802,0.838998872419812,1.6507082516404,1.25396979922086,3.35941786920128,6.04802646567407,16.7360306382335,4.43112248820062,0,6.58967555380058,2.20597848207521,0.81014194788176,2.32179293538607,0.44905874525234,1.12611480483322,1.53316637465883,0.949265659568129,0,1.31780417436063,3.87780264148325,0.436094052142534,0,0,0,0.860509862246441,0.354668382198357,1.12135520028461,0,0.24666754841716,1.55605517699883,0.942974704487816,0.817309515567294,1.21085942115945,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,2.22540236350701,0,0,0,0,0,1.31693286264251,0.612975591598039,1.05166641234618,0.794025282120147,0.358779271377724,2.77624605464138,0.635795703478686,0.300091096084402,0.412210116953756,1.03056216018252,0.930584281657949,0,0.194874010322397,0.252433774244115,0.552299391853796,0.80823028409406,1.42003837006646,0.201504196455281,0,1.54608682530637,0.272746120590835,1.14721838155602,0.243947412259191,0.132529768321485,0.929551542956147,1.7622379352613,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,7.38155454624648,0,4.5273141246454,7.3504355692771,0,0.982827216677626,1.77236972004421,0,0.368965315629341,0.171567810298526,1.64625428112938,0,0.603173834469785,2.03694579348765,0.325808305310325,1.03993478527958,0,1.15930404975077,0.234817388471643,1.29929802984966,2.31492756288305,1.52203321787679,33.9787891122488,39.4903634563641,0,0,0,0,1.84780341018745,0.708875486211932,0.716468181622786,0.290633938513962,2.68367875415648,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.714889968290738,2.17048642156577,0,0.65147236858747,1.06617584622764,0.791951872933429,0.301439377059586,0.871533458600294,0.599837947092342,1.2162378064119,0,0,0.239624855491583,4.59447743336456,0,0,0,0,0,0.197030760201927,0,0.128343036279748,2.03275699377971,1.30139853857622,1.54657762555539,0.502548796003046,0.637938751653163,1.49801404789436,2.99161459204025,2.90090859405225,0,0,0,0.415941723061614,0,0,0,0,0,0,0.664225598535437,0,0,0.391602314925481,0,1.03384013061444,1.2942852049117,1.17400313583789,0,4.99306318531491,0.30239029332968,0,0.460385919864187,0.841980283299221,0.128139149255701,2.04682899626681,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0.229628896329213,0,0.262248829918848,0,0,0,0,0.316654886678627,2.27466768141793,5.95327968467805,1.72732732881711,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0.859361958946189,0.580066775656914,0.0852266274161009,2.93805717634233,0.330569830721956,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0.632758849437452,5.71890581771475,0,0,0,0,0.539617372749944,2.19629623788844,0.706874414074119,0.202182481573316,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0.282431402330337,0,0,0.886860307073351,0.459446800413919,0.507447609232169,0,0.569647187174163,0,2.46817363851717,1.94541993357815,2.70015718619057,1.58625035258854,0.854592569019785,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,1.46508179271894,0,0,0.568272293612826,0.95497793895076,2.96964680832639,0,0.994147647766298,1.1253553312841,0,0,0.422250816255987,1.39473591775749,1.10513566212459,0,0.306806047506464,0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| ||
|short_description=p4@SULF2 | |short_description=p4@SULF2 | ||
}} | }} |
Latest revision as of 16:46, 16 September 2015
Short description: | p4@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SULF2_5end |
Coexpression cluster: | C1870_MCF7_breast_lung_Endothelial_CD14_Dendritic_Hepatic |
Association with transcript: | 0bp_to_ENST00000359930, ENST00000467815_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | Q8IWU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-19 | 42 |
myeloid leukocyte | 2.66e-17 | 72 |
defensive cell | 2.08e-16 | 48 |
phagocyte | 2.08e-16 | 48 |
monopoietic cell | 6.85e-15 | 59 |
monocyte | 6.85e-15 | 59 |
monoblast | 6.85e-15 | 59 |
promonocyte | 6.85e-15 | 59 |
macrophage dendritic cell progenitor | 5.40e-14 | 61 |
granulocyte monocyte progenitor cell | 1.36e-12 | 67 |
myeloid lineage restricted progenitor cell | 5.15e-12 | 66 |
endothelial cell of vascular tree | 1.03e-08 | 24 |
endothelial cell | 1.08e-08 | 36 |
intermediate monocyte | 9.09e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.09e-08 | 9 |
myeloid cell | 1.42e-07 | 108 |
common myeloid progenitor | 1.42e-07 | 108 |
granulocyte | 4.03e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.39e-13 | 108 |
immune system | 1.08e-11 | 93 |
bone marrow | 2.60e-10 | 76 |
hematopoietic system | 8.06e-10 | 98 |
blood island | 8.06e-10 | 98 |
bone element | 1.03e-08 | 82 |
lateral plate mesoderm | 1.90e-08 | 203 |
embryonic structure | 8.09e-08 | 564 |
skeletal element | 1.54e-07 | 90 |
germ layer | 2.41e-07 | 560 |
germ layer / neural crest | 2.41e-07 | 560 |
embryonic tissue | 2.41e-07 | 560 |
presumptive structure | 2.41e-07 | 560 |
germ layer / neural crest derived structure | 2.41e-07 | 560 |
epiblast (generic) | 2.41e-07 | 560 |
embryo | 3.33e-07 | 592 |
developing anatomical structure | 4.56e-07 | 581 |
skeletal system | 4.89e-07 | 100 |