FFCP PHASE1:Hg19::chr19:18654366..18654398,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18654366..18654398,-
|short_description=p1@FKBP8
|description=CAGE_peak_1_at_FKBP8_5end
|association_with_transcript=0bp_to_ENST00000222308,ENST0000054483...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23770 | |EntrezGene=23770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3724 | |HGNC=3724 | ||
|TSSclassifier=strong | |||
|UniProt=C8C9T5,Q14318 | |UniProt=C8C9T5,Q14318 | ||
|association_with_transcript=0bp_to_ENST00000222308,ENST00000544835,NM_012181,uc002njj.1,uc002njk.1,uc002njl.1,uc002njm.1,uc010ebr.1_5end | |||
|cluster_id=chr19:18654366..18654398,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_FKBP8_5end | |||
|id=chr19:18654366..18654398,- | |||
|ontology_enrichment_celltype=CL:0000183!6.20e-11!59;CL:0000192!4.72e-10!42;CL:0000514!4.72e-10!42;CL:0000680!2.28e-09!57;CL:0000056!2.28e-09!57;CL:0000355!2.28e-09!57;CL:0000187!3.88e-09!54;CL:0000359!1.25e-08!32;CL:0000222!1.67e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.79e-08;32!CL:0000192;1.08e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.59e-10,43;CL:0000514,3.59e-10,43;CL:0000680,1.69e-09,58;CL:0000056,1.69e-09,58;CL:0000355,1.69e-09,58;CL:0000187,2.88e-09,55;CL:0000222,1.03e-08,121;CL:0000359,1.25e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.86e-14!115;UBERON:0000475!3.99e-11!365;UBERON:0000483!2.37e-10!309;UBERON:0000119!2.55e-10!312;UBERON:0000486!8.07e-10!82;UBERON:0001009!9.93e-10!113;UBERON:0004872!1.11e-09!84;UBERON:0004290!1.68e-09!70;UBERON:0004535!1.74e-09!110;UBERON:0005256!1.86e-09!143;UBERON:0000914!1.88e-09!83;UBERON:0002329!1.88e-09!83;UBERON:0003077!1.88e-09!83;UBERON:0003059!1.88e-09!83;UBERON:0007282!1.88e-09!83;UBERON:0009618!1.88e-09!83;UBERON:0007285!1.88e-09!83;UBERON:0004111!3.28e-09!241;UBERON:0002385!7.09e-09!63;UBERON:0001015!7.09e-09!63;UBERON:0000383!7.09e-09!63;UBERON:0001134!9.26e-09!61;UBERON:0002036!9.26e-09!61;UBERON:0003082!9.26e-09!61;UBERON:0000477!1.38e-08!286;UBERON:0000479!1.67e-08!787;UBERON:0000468!1.76e-08!659;UBERON:0000467!2.82e-08!625;UBERON:0000480!3.04e-08!626;UBERON:0000025!3.29e-08!194;UBERON:0000481!4.47e-08!347;UBERON:0001981!2.17e-07!60;UBERON:0007500!2.17e-07!60;UBERON:0004537!2.17e-07!60;UBERON:0006965!2.17e-07!60;UBERON:0001637!2.23e-07!42;UBERON:0003509!2.23e-07!42;UBERON:0004572!2.23e-07!42;UBERON:0002049!3.43e-07!79;UBERON:0007798!3.43e-07!79;UBERON:0002100!3.46e-07!216;UBERON:0000055!4.02e-07!69;UBERON:0003914!4.79e-07!118;UBERON:0000064!5.55e-07!219;UBERON:0000923!8.68e-07!604;UBERON:0005291!8.68e-07!604;UBERON:0006598!8.68e-07!604;UBERON:0002532!8.68e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.74e-13,114;UBERON:0007503,2.44e-11,78;UBERON:0000483,6.19e-11,306;UBERON:0000119,6.72e-11,309;UBERON:0000479,2.49e-10,773;UBERON:0007524,5.10e-10,73;UBERON:0003077,5.48e-10,72;UBERON:0007285,5.48e-10,72;UBERON:0000486,5.93e-10,83;UBERON:0001009,9.88e-10,112;UBERON:0004872,1.06e-09,83;UBERON:0002329,1.24e-09,71;UBERON:0003059,1.24e-09,71;UBERON:0007282,1.24e-09,71;UBERON:0004290,1.24e-09,71;UBERON:0009618,1.24e-09,71;UBERON:0004535,1.73e-09,109;UBERON:0004111,3.09e-09,240;UBERON:0002385,5.24e-09,64;UBERON:0001015,5.24e-09,64;UBERON:0000383,5.24e-09,64;UBERON:0001134,6.86e-09,62;UBERON:0002036,6.86e-09,62;UBERON:0003082,6.86e-09,62;UBERON:0000926,9.26e-09,315;UBERON:0004120,9.26e-09,315;UBERON:0006603,9.26e-09,315;UBERON:0000025,3.48e-08,192;UBERON:0003104,4.58e-08,160;UBERON:0009142,4.58e-08,160;UBERON:0005423,7.34e-08,581;UBERON:0005256,1.12e-07,122;UBERON:0000923,1.58e-07,560;UBERON:0010316,1.58e-07,560;UBERON:0005291,1.58e-07,560;UBERON:0006598,1.58e-07,560;UBERON:0010317,1.58e-07,560;UBERON:0002532,1.58e-07,560;UBERON:0007500,2.05e-07,59;UBERON:0001981,2.05e-07,59;UBERON:0004537,2.05e-07,59;UBERON:0006965,2.05e-07,59;UBERON:0001637,2.23e-07,42;UBERON:0003509,2.23e-07,42;UBERON:0004572,2.23e-07,42;UBERON:0002050,2.92e-07,564;UBERON:0002049,3.38e-07,78;UBERON:0007798,3.38e-07,78;UBERON:0000055,3.90e-07,68;UBERON:0003914,6.26e-07,117;UBERON:0000922,7.34e-07,592;UBERON:0002100,8.58e-07,199 | |||
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| ||
|short_description=p1@FKBP8 | |||
}} | }} |
Latest revision as of 16:45, 16 September 2015
Short description: | p1@FKBP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FKBP8_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000222308, ENST00000544835, NM_012181, uc002njj.1, uc002njk.1, uc002njl.1, uc002njm.1, uc010ebr.1_5end |
EntrezGene: | FKBP8 |
HGNC: | 3724 |
UniProt: | C8C9T5Q14318 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.59e-10 | 43 |
smooth muscle myoblast | 3.59e-10 | 43 |
muscle precursor cell | 1.69e-09 | 58 |
myoblast | 1.69e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-09 | 58 |
muscle cell | 2.88e-09 | 55 |
mesodermal cell | 1.03e-08 | 121 |
vascular associated smooth muscle cell | 1.25e-08 | 32 |