FFCP PHASE1:Hg19::chr11:128392085..128392232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2113 | |EntrezGene=2113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3488 | |HGNC=3488 | ||
|TSSclassifier=strong | |||
|UniProt=P14921,Q96AC5,F5GYX9,A8K725,B4DW78,Q6N087 | |UniProt=P14921,Q96AC5,F5GYX9,A8K725,B4DW78,Q6N087 | ||
|association_with_transcript=0bp_to_ENST00000319397,ENST00000345075,ENST00000526145,ENST00000531611,ENST00000535549,NM_001162422,NM_005238,uc009zcg.2,uc009zch.2,uc010sbs.1_5end | |association_with_transcript=0bp_to_ENST00000319397,ENST00000345075,ENST00000526145,ENST00000531611,ENST00000535549,NM_001162422,NM_005238,uc009zcg.2,uc009zch.2,uc010sbs.1_5end | ||
|cluster_id=chr11:128392085..128392232,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_ETS1_5end | |description=CAGE_peak_1_at_ETS1_5end | ||
|id=chr11:128392085..128392232,- | |id=chr11:128392085..128392232,- | ||
|ontology_enrichment_celltype=CL:0000542!5.58e-23!53;CL:0000051!5.58e-23!53;CL:0000838!1.15e-22!52;CL:0000084!5.37e-13!25;CL:0000827!5.37e-13!25;CL:0000791!7.49e-13!18;CL:0000789!7.49e-13!18;CL:0002420!7.49e-13!18;CL:0002419!7.49e-13!18;CL:0000790!7.49e-13!18;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24;CL:0000625!1.14e-08!11;CL:0000236!1.54e-07!14 | |ontology_enrichment_celltype=CL:0000542!5.58e-23!53;CL:0000051!5.58e-23!53;CL:0000838!1.15e-22!52;CL:0000084!5.37e-13!25;CL:0000827!5.37e-13!25;CL:0000791!7.49e-13!18;CL:0000789!7.49e-13!18;CL:0002420!7.49e-13!18;CL:0002419!7.49e-13!18;CL:0000790!7.49e-13!18;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24;CL:0000625!1.14e-08!11;CL:0000236!1.54e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.36e-13;53!CL:0000084;4.91e-13;25!CL:0000791;7.56e-13;18!CL:0000789;7.56e-13;18!CL:0002419;7.56e-13;18!CL:0000945;2.88e-09;24!CL:0000625;1.14e-08;11!CL:0000236;3.68e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.52e-23,53;CL:0000051,5.52e-23,53;CL:0000838,1.14e-22,52;CL:0000084,5.34e-13,25;CL:0000827,5.34e-13,25;CL:0000791,7.45e-13,18;CL:0000789,7.45e-13,18;CL:0002420,7.45e-13,18;CL:0002419,7.45e-13,18;CL:0000790,7.45e-13,18;CL:0000945,3.05e-09,24;CL:0000826,3.05e-09,24;CL:0000625,1.13e-08,11;CL:0000236,1.54e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.36e-13;53!CL:0000790;7.56e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.64e-10!110;UBERON:0001009!1.17e-09!113;UBERON:0000178!1.50e-09!15;UBERON:0000179!1.50e-09!15;UBERON:0000463!1.50e-09!15 | |ontology_enrichment_uberon=UBERON:0004535!8.64e-10!110;UBERON:0001009!1.17e-09!113;UBERON:0000178!1.50e-09!15;UBERON:0000179!1.50e-09!15;UBERON:0000463!1.50e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-09;15!UBERON:0000179;1.49e-09;15!UBERON:0000463;1.49e-09;15!UBERON:0002390;8.34e-08;32!UBERON:0002193;1.18e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.42e-09,109;UBERON:0000178,1.50e-09,15;UBERON:0000179,1.50e-09,15;UBERON:0000463,1.50e-09,15;UBERON:0001009,1.92e-09,112 | |||
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| ||
|short_description=p1@ETS1 | |short_description=p1@ETS1 | ||
}} | }} |
Latest revision as of 16:29, 16 September 2015
Short description: | p1@ETS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000319397, ENST00000345075, ENST00000526145, ENST00000531611, ENST00000535549, NM_001162422, NM_005238, uc009zcg.2, uc009zch.2, uc010sbs.1_5end |
EntrezGene: | ETS1 |
HGNC: | 3488 |
UniProt: | P14921Q96AC5F5GYX9A8K725B4DW78Q6N087 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.52e-23 | 53 |
common lymphoid progenitor | 5.52e-23 | 53 |
lymphoid lineage restricted progenitor cell | 1.14e-22 | 52 |
T cell | 5.34e-13 | 25 |
pro-T cell | 5.34e-13 | 25 |
mature alpha-beta T cell | 7.45e-13 | 18 |
alpha-beta T cell | 7.45e-13 | 18 |
immature T cell | 7.45e-13 | 18 |
mature T cell | 7.45e-13 | 18 |
immature alpha-beta T cell | 7.45e-13 | 18 |
lymphocyte of B lineage | 3.05e-09 | 24 |
pro-B cell | 3.05e-09 | 24 |
CD8-positive, alpha-beta T cell | 1.13e-08 | 11 |
B cell | 1.54e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.42e-09 | 109 |
blood | 1.50e-09 | 15 |
haemolymphatic fluid | 1.50e-09 | 15 |
organism substance | 1.50e-09 | 15 |
circulatory system | 1.92e-09 | 112 |