FFCP PHASE1:Hg19::chr2:119699764..119699777,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:119699764..119699777,+ to FFCP PHASE1:Hg19::chr2:119699764..119699777,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8685 | |EntrezGene=8685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6895 | |HGNC=6895 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG40,Q9UEW3 | |UniProt=Q4ZG40,Q9UEW3 | ||
|association_with_transcript=19bp_to_NM_006770,uc002tln.1,uc010yyf.1_5end | |||
|cluster_id=chr2:119699764..119699777,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_2_at_MARCO_5end | |||
|id=chr2:119699764..119699777,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.15e-48!42;CL:0002194!5.32e-48!63;CL:0000576!5.32e-48!63;CL:0000040!5.32e-48!63;CL:0000559!5.32e-48!63;CL:0002009!5.44e-46!65;CL:0000860!7.90e-44!45;CL:0000839!4.25e-43!70;CL:0000557!3.03e-42!71;CL:0000766!7.51e-42!76;CL:0000763!7.36e-25!112;CL:0000049!7.36e-25!112;CL:0002087!1.46e-23!119;CL:0000738!5.00e-20!140;CL:0002031!1.08e-19!124;CL:0000037!2.10e-14!172;CL:0000566!2.10e-14!172;CL:0002032!1.72e-13!165;CL:0000837!1.72e-13!165;CL:0000988!1.12e-12!182;CL:0002393!3.56e-07!9;CL:0002397!3.56e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.43e-66;39!CL:0000234;1.43e-66;39!CL:0000860;1.90e-62;33!CL:0002057;1.90e-62;33!CL:0000576;9.96e-48;48!CL:0000766;7.16e-31;69!CL:0000235;3.73e-18;6!CL:0000763;4.21e-15;100!CL:0002087;4.64e-11;104!CL:0002393;1.16e-10;6!CL:0002397;1.16e-10;6!CL:0002619;8.68e-10;3!CL:0000738;8.80e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.67e-88,48;CL:0000234,6.67e-88,48;CL:0002194,9.23e-84,59;CL:0000576,9.23e-84,59;CL:0000040,9.23e-84,59;CL:0000559,9.23e-84,59;CL:0002009,1.19e-80,61;CL:0000839,1.10e-73,66;CL:0000557,2.04e-72,67;CL:0000860,2.84e-71,42;CL:0002057,2.84e-71,42;CL:0000766,1.12e-69,72;CL:0000763,1.87e-42,108;CL:0000049,1.87e-42,108;CL:0002087,4.46e-41,115;CL:0002031,3.25e-35,120;CL:0000738,1.88e-34,136;CL:0000037,1.68e-25,168;CL:0002032,1.76e-24,161;CL:0000837,1.76e-24,161;CL:0000988,1.44e-23,177;CL:0000235,3.70e-18,6;CL:0002619,8.83e-10,3;CL:0000134,1.17e-08,354;CL:0002320,2.96e-08,361;CL:0002393,4.76e-07,9;CL:0002397,4.76e-07,9;CL:0000219,7.63e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-53;42!CL:0000049;2.33e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-37!102;UBERON:0003061!2.13e-37!102;UBERON:0002371!1.56e-35!80;UBERON:0002193!5.06e-35!112;UBERON:0001474!7.47e-32!86;UBERON:0002405!1.34e-31!115;UBERON:0007023!8.39e-28!115;UBERON:0004765!6.79e-27!101;UBERON:0001434!6.79e-27!101;UBERON:0003081!3.64e-16!216;UBERON:0002204!4.39e-13!167;UBERON:0000062!1.11e-10!511;UBERON:0000467!2.04e-08!625;UBERON:0000480!2.39e-08!626;UBERON:0000468!4.10e-08!659;UBERON:0000926!2.10e-07!448;UBERON:0004120!2.10e-07!448;UBERON:0006603!2.10e-07!448;UBERON:0000923!4.44e-07!604;UBERON:0005291!4.44e-07!604;UBERON:0006598!4.44e-07!604;UBERON:0002532!4.44e-07!604;UBERON:0002050!5.12e-07!605;UBERON:0005423!5.12e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.78e-62,76;UBERON:0001474,4.75e-57,82;UBERON:0002405,4.79e-54,93;UBERON:0002390,1.00e-52,98;UBERON:0003061,1.00e-52,98;UBERON:0004765,6.26e-51,90;UBERON:0002193,3.94e-49,108;UBERON:0001434,1.20e-44,100;UBERON:0003081,7.92e-25,203;UBERON:0002204,3.68e-23,167;UBERON:0000926,1.44e-13,315;UBERON:0004120,1.44e-13,315;UBERON:0006603,1.44e-13,315;UBERON:0002384,3.07e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,1.39334510984468,0,0,0,0,0,0,3.87796785972314,1.20326668482085,0.651032612147555,22.3915474239924,8.09734165047449,32.7120970895417,3.19876125315042,2.26725566213286,2.18325655069035,2.78914844286822,3.70051099219643,1.54853185447552,2.8769239232215,3.07392847834921,1.41889337933151,3.10271112662957,1.29096936716765,1.35426486594342,4.32957380947991,3.27487380069415,1.34834090667051,1.83650335422542,1.92557416245656,2.55734850319616,4.28806690242731,2.59302754908121,1.70489900213078,2.90209238628584,2.8369261234557,0.622822248995575,2.26123798731069,3.12889751052121,1.52032191293582,1.21079900526674,2.20966581592539,2.21523671208619,1.90129757680748,1.70083439972035,3.56419697364239,2.69588714751588,0.750884464207532,1.12507910687956,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,8.71010852059789,0,0,0,0,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.331377282774,51.4809383306323,133.768046059855,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6760427090024,24.6105974801742,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3649213977267,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,10.7323932885528,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,1.97286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0.108647371922008,1.27600463892768,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49723242767845,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,2.61870344518732,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0.798716001995964,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,5.8620893471233,2.65013777824443,0.129282956361551,0.13223260174269,0,0,29.1529636309806,0.157204305099666,41.4239055347196,21.3351389379139,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0.975726071789027,0,0.171488009437418,0.135939465953663,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.33461648913121,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.980593287015622,0,0.392616934229891,0,0,0,1.87967835959707,0.128915775947154,0,0,0,0,0,2.2936464170227,0.573358332605805,0,0.135982980381829,0.436350690340377,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0,0,0,2.98527574661373,0,0,0.372448285775147,0,0.190941474834495,0,0,0,0.0673520530145875,3.65783247502649,0,0,0,0,0,2.34640942403454,0,0,0,36.6318304335668,0 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| ||
|short_description=p2@MARCO | |||
}} | }} |
Latest revision as of 16:25, 16 September 2015
Short description: | p2@MARCO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCO_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | 19bp_to_NM_006770, uc002tln.1, uc010yyf.1_5end |
EntrezGene: | MARCO |
HGNC: | 6895 |
UniProt: | Q4ZG40Q9UEW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.67e-88 | 48 |
phagocyte | 6.67e-88 | 48 |
monopoietic cell | 9.23e-84 | 59 |
monocyte | 9.23e-84 | 59 |
monoblast | 9.23e-84 | 59 |
promonocyte | 9.23e-84 | 59 |
macrophage dendritic cell progenitor | 1.19e-80 | 61 |
myeloid lineage restricted progenitor cell | 1.10e-73 | 66 |
granulocyte monocyte progenitor cell | 2.04e-72 | 67 |
classical monocyte | 2.84e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.84e-71 | 42 |
myeloid leukocyte | 1.12e-69 | 72 |
myeloid cell | 1.87e-42 | 108 |
common myeloid progenitor | 1.87e-42 | 108 |
nongranular leukocyte | 4.46e-41 | 115 |
hematopoietic lineage restricted progenitor cell | 3.25e-35 | 120 |
leukocyte | 1.88e-34 | 136 |
hematopoietic stem cell | 1.68e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.76e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-24 | 161 |
hematopoietic cell | 1.44e-23 | 177 |
macrophage | 3.70e-18 | 6 |
adult endothelial progenitor cell | 8.83e-10 | 3 |
mesenchymal cell | 1.17e-08 | 354 |
connective tissue cell | 2.96e-08 | 361 |
intermediate monocyte | 4.76e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.76e-07 | 9 |
motile cell | 7.63e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-62 | 76 |
bone element | 4.75e-57 | 82 |
immune system | 4.79e-54 | 93 |
hematopoietic system | 1.00e-52 | 98 |
blood island | 1.00e-52 | 98 |
skeletal element | 6.26e-51 | 90 |
hemolymphoid system | 3.94e-49 | 108 |
skeletal system | 1.20e-44 | 100 |
lateral plate mesoderm | 7.92e-25 | 203 |
musculoskeletal system | 3.68e-23 | 167 |
mesoderm | 1.44e-13 | 315 |
mesoderm-derived structure | 1.44e-13 | 315 |
presumptive mesoderm | 1.44e-13 | 315 |
connective tissue | 3.07e-08 | 371 |