FFCP PHASE1:Hg19::chr17:60757813..60757817,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:60757813..60757817,+
|short_description=p4@MRC2
|description=CAGE_peak_4_at_MRC2_5end
|association_with_transcript=-174bp_to_uc002jae.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9902 | |EntrezGene=9902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16875 | |HGNC=16875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_uc002jae.2_5end | |||
|cluster_id=chr17:60757813..60757817,+ | |||
|description=CAGE_peak_4_at_MRC2_5end | |||
|id=chr17:60757813..60757817,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000680!5.15e-17!57;CL:0000056!5.15e-17!57;CL:0000355!5.15e-17!57;CL:0000183!1.65e-16!59;CL:0000393!4.24e-16!60;CL:0000211!4.24e-16!60;CL:0000187!6.49e-16!54;CL:0000192!1.68e-14!42;CL:0000514!1.68e-14!42;CL:0000057!1.84e-11!75;CL:0000359!7.54e-10!32;CL:0000222!7.90e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.03e-12;43!CL:0000359;9.73e-10;32!CL:0000153;7.78e-09;9!CL:0000447;7.78e-09;9!CL:0000187;9.13e-09;55!CL:0002595;4.21e-08;5!CL:0000393;9.10e-08;61!CL:0000211;9.10e-08;61!CL:0002620;2.89e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.35e-16,43;CL:0000514,2.35e-16,43;CL:0000187,5.51e-15,55;CL:0000393,2.49e-14,61;CL:0000211,2.49e-14,61;CL:0000680,6.47e-14,58;CL:0000056,6.47e-14,58;CL:0000355,6.47e-14,58;CL:0000359,2.86e-10,32;CL:0000153,1.22e-08,9;CL:0000447,1.22e-08,9;CL:0002595,3.17e-08,5;CL:0000222,4.96e-08,121;CL:0000723,1.74e-07,433;CL:0000048,2.70e-07,427;CL:0002620,4.12e-07,23;CL:0000034,4.30e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.03e-12;43!CL:0000355;2.59e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-16!83;UBERON:0002329!1.36e-16!83;UBERON:0003077!1.36e-16!83;UBERON:0003059!1.36e-16!83;UBERON:0007282!1.36e-16!83;UBERON:0009618!1.36e-16!83;UBERON:0007285!1.36e-16!83;UBERON:0004290!4.91e-15!70;UBERON:0002385!6.33e-15!63;UBERON:0001015!6.33e-15!63;UBERON:0000383!6.33e-15!63;UBERON:0001134!1.21e-14!61;UBERON:0002036!1.21e-14!61;UBERON:0003082!1.21e-14!61;UBERON:0005256!6.54e-14!143;UBERON:0000486!1.18e-13!82;UBERON:0000475!3.95e-09!365;UBERON:0000481!5.96e-09!347;UBERON:0003104!1.34e-08!238;UBERON:0009142!1.34e-08!238;UBERON:0001637!4.20e-08!42;UBERON:0003509!4.20e-08!42;UBERON:0004572!4.20e-08!42;UBERON:0004573!5.58e-08!33;UBERON:0004571!5.58e-08!33;UBERON:0002100!6.09e-08!216;UBERON:0003102!1.37e-07!95;UBERON:0000490!1.85e-07!138;UBERON:0001981!2.84e-07!60;UBERON:0007500!2.84e-07!60;UBERON:0004537!2.84e-07!60;UBERON:0006965!2.84e-07!60;UBERON:0004872!3.92e-07!84;UBERON:0002049!7.04e-07!79;UBERON:0007798!7.04e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.53e-11;33!UBERON:0004571;1.53e-11;33!UBERON:0001637;5.08e-09;42!UBERON:0003509;5.08e-09;42!UBERON:0004572;5.08e-09;42!UBERON:0003513;1.51e-08;7!UBERON:0003834;4.21e-08;5!UBERON:0001533;4.21e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.58e-13,33;UBERON:0004571,1.58e-13,33;UBERON:0002329,9.43e-13,71;UBERON:0003059,9.43e-13,71;UBERON:0007282,9.43e-13,71;UBERON:0004290,9.43e-13,71;UBERON:0009618,9.43e-13,71;UBERON:0001134,1.18e-12,62;UBERON:0002036,1.18e-12,62;UBERON:0003082,1.18e-12,62;UBERON:0003077,1.72e-12,72;UBERON:0007285,1.72e-12,72;UBERON:0000486,2.52e-12,83;UBERON:0007524,3.09e-12,73;UBERON:0002385,4.38e-12,64;UBERON:0001015,4.38e-12,64;UBERON:0000383,4.38e-12,64;UBERON:0001637,2.28e-11,42;UBERON:0003509,2.28e-11,42;UBERON:0004572,2.28e-11,42;UBERON:0005256,2.75e-11,122;UBERON:0007503,4.56e-11,78;UBERON:0003513,1.10e-08,7;UBERON:0003104,2.83e-08,160;UBERON:0009142,2.83e-08,160;UBERON:0003834,3.17e-08,5;UBERON:0001533,3.17e-08,5;UBERON:0007500,5.12e-08,59;UBERON:0001981,5.12e-08,59;UBERON:0004537,5.12e-08,59;UBERON:0006965,5.12e-08,59;UBERON:0000490,2.71e-07,148 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,2.23480547213644,1.74467704820074,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0.263766978228454,1.98026164736075,0.994192127183747,0,0,1.46062018077475,0.487932798790507,0.738726348460727,0.408001382488506,1.25381888591235,1.14494394852423,0,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.0843174571537,1.00267582127178,0.289693037921647,0,1.45990461090791,0.378139268656271,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,1.47065232138347,0,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,2.65924074495618,0,0.286836620748814,0.354668382198357,0,5.33744978648525,0.98667019366864,0.311211035399766,0.404132016209064,0.490385709340376,1.05950199351452,0.576175924479999,1.17160715916898,0,0,0.747243402759005,0.117434498643765,0.323745888736263,0.280901613404497,0.816616685019573,0.61417158655884,0.309977343527296,2.37600571456411,0.741800787835671,0,0.718618141816238,0.841680569770331,0.125118519871964,0.277064115484183,0.877955241761676,0.612975591598039,0,1.81491493056034,0,1.06778694409284,1.27159140695737,0.300091096084402,2.16410311400722,0,1.30281799432113,0,2.33848812386877,0.252433774244115,1.38074847963449,2.10139873864455,0.710019185033229,2.01504196455281,2.37384829234683,0,0.272746120590835,0,0,0,0,0,0.504641701751257,0,0,1.28648187638577,1.38134921352481,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.514703430895577,1.20725313949488,0,0,0.185176890317059,0.325808305310325,2.07986957055916,0,0.231860809950154,1.87853910777315,0.433099343283221,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.716468181622786,0,0.766765358330422,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0,0,0,0.448524337381443,0.43596006883328,0.36669142910475,0,3.57656445851882,0,2.6593811658487,0,0.771622122786426,0,0.532844358032199,1.00084595560703,3.25572963234866,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0,0,0.718874566474748,0,0,0.579125226670317,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,1.17261385734044,0,0,0,0,0.613457458595699,0,0.271265023699736,0.207970861530807,0.356857977594324,0.630809660135739,0.819989904948992,0,0,14.4862299809507,0,0.553107505625109,1.47702144595741,3.13281851940385,2.05886054286514,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.384417447767103,0.511707249066704,0.804269605718038,0,0.462629081407967,0.532685175939381,0.821271560138091,0.519254429183621,1.16210378459959,0.725156697549733,0.200506470303285,0.184161977871793,1.60740227430449,0,0.393373244878272,0,0.0770153371044148,0.784349769176855,0,0.73886140225013,0,0,0.215915916102139,0,0.812839312631559,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,1.55668090191184,2.80532299729999,0,0,0,9.86041326579644,0.308097234229289,0.460511024178389,0.275673144969061,0.644521469209642,0.290033387828457,0.340906509664404,6.14321045962488,0.165284915360978,0.576570202095319,0,0,0.464845549297286,0,2.7881490806424,2.7723022215848,1.06461206063404,6.08953094452551,0.37064843820784,1.28812398067792,0.372158369359667,0,0.190630193923825,1.79128453917934,0.42793898803392,0.95460974377781,5.49464048139461,1.61885211824983,0.274537029736055,0.117812402345686,0.606547444719948,1.58510321173008,1.26377536871694,2.43816869544795,0.974853958525138,3.16950440270266,2.18399858252777,0.282810863907425,0,1.65409603063837,1.32687795048244,1.31535265576129,2.31510213706675,0.655894752046633,0.202910376962704,0.92947049429925,0.281695602532241,0.430234056612155,0.982490410131212,0,1.77380532035299,1.68886108238131,1.64647446479951,0,0,0.0962221127255121,0.670302275535787,0,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0.766021480529467,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0.511572370226872,1.08507746200627,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.38510465306835,0.683652335082007,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0.870592065804026,0,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.678923115418936,1.059073520298,0,0.13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| ||
|short_description=p4@MRC2 | |||
}} | }} |
Latest revision as of 16:21, 16 September 2015
Short description: | p4@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MRC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -174bp_to_uc002jae.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.35e-16 | 43 |
smooth muscle myoblast | 2.35e-16 | 43 |
muscle cell | 5.51e-15 | 55 |
electrically responsive cell | 2.49e-14 | 61 |
electrically active cell | 2.49e-14 | 61 |
muscle precursor cell | 6.47e-14 | 58 |
myoblast | 6.47e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.47e-14 | 58 |
vascular associated smooth muscle cell | 2.86e-10 | 32 |
GAG secreting cell | 1.22e-08 | 9 |
carbohydrate secreting cell | 1.22e-08 | 9 |
smooth muscle cell of the subclavian artery | 3.17e-08 | 5 |
mesodermal cell | 4.96e-08 | 121 |
somatic stem cell | 1.74e-07 | 433 |
multi fate stem cell | 2.70e-07 | 427 |
skin fibroblast | 4.12e-07 | 23 |
stem cell | 4.30e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 1.58e-13 | 33 |
systemic arterial system | 1.58e-13 | 33 |
somite | 9.43e-13 | 71 |
presomitic mesoderm | 9.43e-13 | 71 |
presumptive segmental plate | 9.43e-13 | 71 |
dermomyotome | 9.43e-13 | 71 |
trunk paraxial mesoderm | 9.43e-13 | 71 |
skeletal muscle tissue | 1.18e-12 | 62 |
striated muscle tissue | 1.18e-12 | 62 |
myotome | 1.18e-12 | 62 |
paraxial mesoderm | 1.72e-12 | 72 |
presumptive paraxial mesoderm | 1.72e-12 | 72 |
multilaminar epithelium | 2.52e-12 | 83 |
dense mesenchyme tissue | 3.09e-12 | 73 |
muscle tissue | 4.38e-12 | 64 |
musculature | 4.38e-12 | 64 |
musculature of body | 4.38e-12 | 64 |
artery | 2.28e-11 | 42 |
arterial blood vessel | 2.28e-11 | 42 |
arterial system | 2.28e-11 | 42 |
trunk mesenchyme | 2.75e-11 | 122 |
epithelial vesicle | 4.56e-11 | 78 |
trunk blood vessel | 1.10e-08 | 7 |
mesenchyme | 2.83e-08 | 160 |
entire embryonic mesenchyme | 2.83e-08 | 160 |
thoracic segment blood vessel | 3.17e-08 | 5 |
subclavian artery | 3.17e-08 | 5 |
epithelial tube open at both ends | 5.12e-08 | 59 |
blood vessel | 5.12e-08 | 59 |
blood vasculature | 5.12e-08 | 59 |
vascular cord | 5.12e-08 | 59 |
unilaminar epithelium | 2.71e-07 | 148 |