FFCP PHASE1:Hg19::chr2:27357446..27357475,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:27357446..27357475,-
|short_description=p2@PREB
|description=CAGE_peak_2_at_PREB_5end
|association_with_transcript=4bp_to_ENST00000406567_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10113 | |EntrezGene=10113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9356 | |HGNC=9356 | ||
|TSSclassifier=strong | |||
|UniProt=B5MC98 | |UniProt=B5MC98 | ||
|association_with_transcript=4bp_to_ENST00000406567_5end | |||
|cluster_id=chr2:27357446..27357475,- | |||
|description=CAGE_peak_2_at_PREB_5end | |||
|id=chr2:27357446..27357475,- | |||
|ontology_enrichment_celltype=CL:0000222!5.06e-10!119;CL:0000136!2.53e-09!15;CL:0000183!4.13e-09!59;CL:0000680!6.72e-08!57;CL:0000056!6.72e-08!57;CL:0000355!6.72e-08!57;CL:0000192!7.73e-08!42;CL:0000514!7.73e-08!42;CL:0000187!9.14e-08!54;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000055!1.20e-07!180;CL:0000359!2.20e-07!32;CL:0002371!2.24e-07!591;CL:0000144!3.79e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.73e-10;13!CL:0000359;6.68e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.72e-10,121;CL:0000136,2.37e-09,15;CL:0000680,3.86e-08,58;CL:0000056,3.86e-08,58;CL:0000355,3.86e-08,58;CL:0000192,4.35e-08,43;CL:0000514,4.35e-08,43;CL:0000187,5.24e-08,55;CL:0000393,6.63e-08,61;CL:0000211,6.63e-08,61;CL:0000359,2.09e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.64e-13!118;UBERON:0002100!5.60e-13!216;UBERON:0004872!1.35e-11!84;UBERON:0005256!6.33e-11!143;UBERON:0000926!3.09e-10!448;UBERON:0004120!3.09e-10!448;UBERON:0006603!3.09e-10!448;UBERON:0000490!1.29e-09!138;UBERON:0009569!2.12e-09!113;UBERON:0003104!4.23e-09!238;UBERON:0009142!4.23e-09!238;UBERON:0001637!2.77e-08!42;UBERON:0003509!2.77e-08!42;UBERON:0004572!2.77e-08!42;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0001981!3.82e-08!60;UBERON:0007500!3.82e-08!60;UBERON:0004537!3.82e-08!60;UBERON:0006965!3.82e-08!60;UBERON:0000055!4.20e-08!69;UBERON:0002417!7.20e-08!61;UBERON:0000916!7.20e-08!61;UBERON:0002385!1.04e-07!63;UBERON:0001015!1.04e-07!63;UBERON:0000383!1.04e-07!63;UBERON:0000466!2.23e-07!126;UBERON:0004290!2.49e-07!70;UBERON:0002049!5.80e-07!79;UBERON:0007798!5.80e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.16e-14,199;UBERON:0005256,6.97e-13,122;UBERON:0003914,1.11e-12,117;UBERON:0004872,1.03e-11,83;UBERON:0003104,2.83e-11,160;UBERON:0009142,2.83e-11,160;UBERON:0009569,9.95e-10,112;UBERON:0007503,2.27e-09,78;UBERON:0000490,3.92e-09,148;UBERON:0001134,1.67e-08,62;UBERON:0002036,1.67e-08,62;UBERON:0003082,1.67e-08,62;UBERON:0001637,2.61e-08,42;UBERON:0003509,2.61e-08,42;UBERON:0004572,2.61e-08,42;UBERON:0007500,2.67e-08,59;UBERON:0001981,2.67e-08,59;UBERON:0004537,2.67e-08,59;UBERON:0006965,2.67e-08,59;UBERON:0000055,3.05e-08,68;UBERON:0000926,3.23e-08,315;UBERON:0004120,3.23e-08,315;UBERON:0006603,3.23e-08,315;UBERON:0002385,6.22e-08,64;UBERON:0001015,6.22e-08,64;UBERON:0000383,6.22e-08,64;UBERON:0002329,1.29e-07,71;UBERON:0003059,1.29e-07,71;UBERON:0007282,1.29e-07,71;UBERON:0004290,1.29e-07,71;UBERON:0009618,1.29e-07,71;UBERON:0002417,1.51e-07,60;UBERON:0000916,1.51e-07,60;UBERON:0003077,2.79e-07,72;UBERON:0007285,2.79e-07,72;UBERON:0007524,3.56e-07,73;UBERON:0002049,5.77e-07,78;UBERON:0007798,5.77e-07,78;UBERON:0000486,6.98e-07,83 | |||
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| ||
|short_description=p2@PREB | |||
}} | }} |
Latest revision as of 16:09, 16 September 2015
Short description: | p2@PREB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PREB_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000406567_5end |
EntrezGene: | PREB |
HGNC: | 9356 |
UniProt: | B5MC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.72e-10 | 121 |
fat cell | 2.37e-09 | 15 |
muscle precursor cell | 3.86e-08 | 58 |
myoblast | 3.86e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.86e-08 | 58 |
smooth muscle cell | 4.35e-08 | 43 |
smooth muscle myoblast | 4.35e-08 | 43 |
muscle cell | 5.24e-08 | 55 |
electrically responsive cell | 6.63e-08 | 61 |
electrically active cell | 6.63e-08 | 61 |
vascular associated smooth muscle cell | 2.09e-07 | 32 |