FFCP PHASE1:Hg19::chr17:60536002..60536040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11011 | |EntrezGene=11011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11842 | |HGNC=11842 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002izx.3_5end | |association_with_transcript=0bp_to_uc002izx.3_5end | ||
|cluster_id=chr17:60536002..60536040,+ | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_4_at_TLK2_5end | |description=CAGE_peak_4_at_TLK2_5end | ||
|id=chr17:60536002..60536040,+ | |id=chr17:60536002..60536040,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.69e-69!24;CL:0000826!1.69e-69!24;CL:0000236!1.19e-50!14;CL:0000542!7.07e-32!53;CL:0000051!7.07e-32!53;CL:0000838!2.34e-29!52;CL:0000738!4.26e-19!140;CL:0002031!5.38e-19!124;CL:0002087!2.58e-18!119;CL:0000988!7.95e-17!182;CL:0000037!1.48e-15!172;CL:0000566!1.48e-15!172;CL:0002032!3.22e-15!165;CL:0000837!3.22e-15!165;CL:0000785!6.93e-10!2;CL:0000955!6.93e-10!2;CL:0000818!6.93e-10!2;CL:0000954!6.93e-10!2;CL:0000816!6.93e-10!2;CL:0002274!2.76e-08!5;CL:0000457!2.76e-08!5;CL:0002191!2.76e-08!5;CL:0000097!2.76e-08!5;CL:0000831!2.76e-08!5;CL:0002028!2.76e-08!5;CL:0000817!7.53e-07!3 | |ontology_enrichment_celltype=CL:0000945!1.69e-69!24;CL:0000826!1.69e-69!24;CL:0000236!1.19e-50!14;CL:0000542!7.07e-32!53;CL:0000051!7.07e-32!53;CL:0000838!2.34e-29!52;CL:0000738!4.26e-19!140;CL:0002031!5.38e-19!124;CL:0002087!2.58e-18!119;CL:0000988!7.95e-17!182;CL:0000037!1.48e-15!172;CL:0000566!1.48e-15!172;CL:0002032!3.22e-15!165;CL:0000837!3.22e-15!165;CL:0000785!6.93e-10!2;CL:0000955!6.93e-10!2;CL:0000818!6.93e-10!2;CL:0000954!6.93e-10!2;CL:0000816!6.93e-10!2;CL:0002274!2.76e-08!5;CL:0000457!2.76e-08!5;CL:0002191!2.76e-08!5;CL:0000097!2.76e-08!5;CL:0000831!2.76e-08!5;CL:0002028!2.76e-08!5;CL:0000817!7.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.72e-91;24!CL:0000236;2.06e-36;13!CL:0000542;1.59e-23;53!CL:0000946;2.10e-14;1!CL:0000786;2.10e-14;1!CL:0002087;1.04e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.20e-91,24;CL:0000826,1.20e-91,24;CL:0000236,1.39e-45,14;CL:0000838,1.10e-41,52;CL:0000542,7.09e-41,53;CL:0000051,7.09e-41,53;CL:0002031,5.10e-20,120;CL:0002087,5.97e-18,115;CL:0000738,1.65e-17,136;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000946,1.84e-14,1;CL:0000786,1.84e-14,1;CL:0000980,1.84e-14,1;CL:0000037,6.61e-14,168;CL:0000988,4.00e-13,177;CL:0000785,7.03e-08,2;CL:0000955,7.03e-08,2;CL:0000818,7.03e-08,2;CL:0000954,7.03e-08,2;CL:0000816,7.03e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.59e-23;53!CL:0000954;7.52e-08;2!UBERON:0006965;7.52e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;4.72e-15;1!DOID:630;2.10e-14;1!DOID:0050177;2.10e-14;1!DOID:0050427;2.10e-14;1!DOID:74;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.73e-15,1;DOID:630,1.41e-14,1;DOID:0050177,1.41e-14,1;DOID:0050427,1.41e-14,1;DOID:74,3.56e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@TLK2 | |short_description=p4@TLK2 | ||
}} | }} |
Latest revision as of 16:02, 16 September 2015
Short description: | p4@TLK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TLK2_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | 0bp_to_uc002izx.3_5end |
EntrezGene: | TLK2 |
HGNC: | 11842 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.20e-91 | 24 |
pro-B cell | 1.20e-91 | 24 |
B cell | 1.39e-45 | 14 |
lymphoid lineage restricted progenitor cell | 1.10e-41 | 52 |
lymphocyte | 7.09e-41 | 53 |
common lymphoid progenitor | 7.09e-41 | 53 |
hematopoietic lineage restricted progenitor cell | 5.10e-20 | 120 |
nongranular leukocyte | 5.97e-18 | 115 |
leukocyte | 1.65e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
antibody secreting cell | 1.84e-14 | 1 |
plasma cell | 1.84e-14 | 1 |
plasmablast | 1.84e-14 | 1 |
hematopoietic stem cell | 6.61e-14 | 168 |
hematopoietic cell | 4.00e-13 | 177 |
mature B cell | 7.03e-08 | 2 |
pre-B-II cell | 7.03e-08 | 2 |
transitional stage B cell | 7.03e-08 | 2 |
small pre-B-II cell | 7.03e-08 | 2 |
immature B cell | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.73e-15 | 1 |
genetic disease | 1.41e-14 | 1 |
monogenic disease | 1.41e-14 | 1 |
xeroderma pigmentosum | 1.41e-14 | 1 |
hematopoietic system disease | 3.56e-08 | 2 |