FFCP PHASE1:Hg19::chr2:27301468..27301496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11117 | |EntrezGene=11117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19880 | |HGNC=19880 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_uc002rii.3,uc010eyq.1_5end | |association_with_transcript=-9bp_to_uc002rii.3,uc010eyq.1_5end | ||
|cluster_id=chr2:27301468..27301496,+ | |||
|coexpression_cluster_id=C1901 | |||
|description=CAGE_peak_1_at_EMILIN1_5end | |description=CAGE_peak_1_at_EMILIN1_5end | ||
|id=chr2:27301468..27301496,+ | |id=chr2:27301468..27301496,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.01e-40!180;CL:0000680!2.12e-22!57;CL:0000056!2.12e-22!57;CL:0000355!2.12e-22!57;CL:0000183!5.32e-22!59;CL:0000187!8.09e-22!54;CL:0000393!2.49e-19!60;CL:0000211!2.49e-19!60;CL:0000057!1.39e-18!75;CL:0000192!5.25e-17!42;CL:0000514!5.25e-17!42;CL:0000359!4.94e-12!32;CL:0000048!1.21e-09!430;CL:0000723!1.15e-08!436;CL:0000222!2.01e-08!119;CL:0000034!2.11e-08!444;CL:0002620!3.24e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.01e-40!180;CL:0000680!2.12e-22!57;CL:0000056!2.12e-22!57;CL:0000355!2.12e-22!57;CL:0000183!5.32e-22!59;CL:0000187!8.09e-22!54;CL:0000393!2.49e-19!60;CL:0000211!2.49e-19!60;CL:0000057!1.39e-18!75;CL:0000192!5.25e-17!42;CL:0000514!5.25e-17!42;CL:0000359!4.94e-12!32;CL:0000048!1.21e-09!430;CL:0000723!1.15e-08!436;CL:0000222!2.01e-08!119;CL:0000034!2.11e-08!444;CL:0002620!3.24e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000192;3.18e-13;43!CL:0000187;5.24e-13;55!CL:0000359;9.47e-12;32!CL:0000393;3.23e-10;61!CL:0000211;3.23e-10;61!CL:0000134;3.38e-09;55!CL:0000723;7.89e-09;61!CL:0000048;1.33e-08;58!CL:0000057;9.00e-08;73!CL:0002620;2.08e-07;23!CL:0000034;2.36e-07;69!CL:0002320;4.42e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.06e-24,58;CL:0000056,8.06e-24,58;CL:0000355,8.06e-24,58;CL:0000187,3.22e-23,55;CL:0000393,7.88e-20,61;CL:0000211,7.88e-20,61;CL:0000057,8.37e-20,76;CL:0000192,3.17e-18,43;CL:0000514,3.17e-18,43;CL:0000359,2.15e-12,32;CL:0000048,2.50e-10,427;CL:0000723,3.35e-09,433;CL:0000034,6.03e-09,441;CL:0000222,2.13e-08,121;CL:0002620,2.06e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.18e-13;43!CL:0000355;9.86e-13;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.73e-26!83;UBERON:0002329!4.73e-26!83;UBERON:0003077!4.73e-26!83;UBERON:0003059!4.73e-26!83;UBERON:0007282!4.73e-26!83;UBERON:0009618!4.73e-26!83;UBERON:0007285!4.73e-26!83;UBERON:0004290!3.52e-24!70;UBERON:0002385!2.39e-23!63;UBERON:0001015!2.39e-23!63;UBERON:0000383!2.39e-23!63;UBERON:0001134!1.06e-22!61;UBERON:0002036!1.06e-22!61;UBERON:0003082!1.06e-22!61;UBERON:0005256!2.10e-17!143;UBERON:0000486!3.26e-17!82;UBERON:0004872!1.05e-14!84;UBERON:0002049!2.84e-13!79;UBERON:0007798!2.84e-13!79;UBERON:0000468!7.47e-13!659;UBERON:0000475!4.29e-11!365;UBERON:0001009!5.93e-11!113;UBERON:0004535!8.11e-11!110;UBERON:0001981!1.07e-10!60;UBERON:0007500!1.07e-10!60;UBERON:0004537!1.07e-10!60;UBERON:0006965!1.07e-10!60;UBERON:0000055!3.97e-10!69;UBERON:0000479!1.13e-09!787;UBERON:0003914!1.34e-09!118;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0004573!4.75e-09!33;UBERON:0004571!4.75e-09!33;UBERON:0000481!5.48e-09!347;UBERON:0000490!6.63e-09!138;UBERON:0000467!5.47e-08!625;UBERON:0002100!6.25e-08!216;UBERON:0001135!7.53e-08!15;UBERON:0000480!8.41e-08!626;UBERON:0000119!8.89e-08!312;UBERON:0000948!1.62e-07!24;UBERON:0005498!1.62e-07!24;UBERON:0004140!1.62e-07!24;UBERON:0009881!1.62e-07!24;UBERON:0004141!1.62e-07!24;UBERON:0003084!1.62e-07!24;UBERON:0007005!1.62e-07!24;UBERON:0004139!1.62e-07!24;UBERON:0004291!1.62e-07!24;UBERON:0000483!1.65e-07!309;UBERON:0007100!2.09e-07!27;UBERON:0002204!4.86e-07!167;UBERON:0000922!9.53e-07!612 | |ontology_enrichment_uberon=UBERON:0000914!4.73e-26!83;UBERON:0002329!4.73e-26!83;UBERON:0003077!4.73e-26!83;UBERON:0003059!4.73e-26!83;UBERON:0007282!4.73e-26!83;UBERON:0009618!4.73e-26!83;UBERON:0007285!4.73e-26!83;UBERON:0004290!3.52e-24!70;UBERON:0002385!2.39e-23!63;UBERON:0001015!2.39e-23!63;UBERON:0000383!2.39e-23!63;UBERON:0001134!1.06e-22!61;UBERON:0002036!1.06e-22!61;UBERON:0003082!1.06e-22!61;UBERON:0005256!2.10e-17!143;UBERON:0000486!3.26e-17!82;UBERON:0004872!1.05e-14!84;UBERON:0002049!2.84e-13!79;UBERON:0007798!2.84e-13!79;UBERON:0000468!7.47e-13!659;UBERON:0000475!4.29e-11!365;UBERON:0001009!5.93e-11!113;UBERON:0004535!8.11e-11!110;UBERON:0001981!1.07e-10!60;UBERON:0007500!1.07e-10!60;UBERON:0004537!1.07e-10!60;UBERON:0006965!1.07e-10!60;UBERON:0000055!3.97e-10!69;UBERON:0000479!1.13e-09!787;UBERON:0003914!1.34e-09!118;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0004573!4.75e-09!33;UBERON:0004571!4.75e-09!33;UBERON:0000481!5.48e-09!347;UBERON:0000490!6.63e-09!138;UBERON:0000467!5.47e-08!625;UBERON:0002100!6.25e-08!216;UBERON:0001135!7.53e-08!15;UBERON:0000480!8.41e-08!626;UBERON:0000119!8.89e-08!312;UBERON:0000948!1.62e-07!24;UBERON:0005498!1.62e-07!24;UBERON:0004140!1.62e-07!24;UBERON:0009881!1.62e-07!24;UBERON:0004141!1.62e-07!24;UBERON:0003084!1.62e-07!24;UBERON:0007005!1.62e-07!24;UBERON:0004139!1.62e-07!24;UBERON:0004291!1.62e-07!24;UBERON:0000483!1.65e-07!309;UBERON:0007100!2.09e-07!27;UBERON:0002204!4.86e-07!167;UBERON:0000922!9.53e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.16e-11;31!UBERON:0001015;1.16e-11;31!UBERON:0000383;1.16e-11;31!UBERON:0002384;4.25e-08;198!UBERON:0001135;4.74e-08;15!UBERON:0002204;4.74e-08;70!UBERON:0004573;5.97e-08;33!UBERON:0004571;5.97e-08;33!UBERON:0000948;4.55e-07;22!UBERON:0007100;5.74e-07;25 | |||
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|phase1_expression=45.056238059098,62.5173529761671,63.429481843187,51.0373821600965,59.8927866532566,40.9999106327173,88.6549573589087,45.4838308867318,54.0654250373666,31.6996778086946,2.09340350391728,3.9319446983431,10.0231451726812,152.603913199737,84.8377281863464,165.391986027137,148.865548421922,173.083491421807,126.862527685532,44.9391861980276,59.3642011520776,225.373944742745,12.0219114595044,7.93871665422728,14.4374035534023,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,12.9184193307333,1.10799081706375,0.200544447470142,0.651032612147555,3.58264758783879,4.85840499028469,1.03030227053675,0,0,0,0.232429036905685,0,0.929119112685311,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0.786300418025466,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,6.58460211937693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,1114.1973790548,211.941471666349,62.3969301796428,30.7223279526881,90.742161825096,65.0360870134099,190.868627292264,140.637477517462,12.1949914141648,12.6385756553661,9.66182642624386,34.9714131578893,0,0,0.97364218096405,1.56716763569341,2.12732736830184,12.1630218395724,8.00792875092179,2.22874500797739,5.56534740626774,4.30117297553062,5.20710752411391,0.56530794192401,1.25849830862972,0.275118041940067,0,0.775250277507987,2.13459757612026,2.67776490211736,11.6820501961653,6.84244895146661,28.0671366180395,0,0.81014194788176,11.0731663072259,18.4114085553459,14.8647154237985,1.53316637465883,2.84779697870439,4.21364011039937,0,0,0,74.5457927542978,75.0918934170958,79.4455084879313,209.390733146634,81.2190595234238,59.4318256150846,118.491385259973,43.6601560698373,113.903238956314,35.1594854101886,42.5000948094993,109.58277761493,206.27098096384,36.0855005024047,32.4646479903533,19.3960419325113,20.9228152772521,21.6079477504527,22.9859581002747,22.4721290723598,52.2634678412527,55.1526084729838,54.9693155855072,100.980242868975,66.7620709052104,34.586131753645,190.433807581303,45.2824146536438,66.312815532141,34.0788862045545,115.890091912541,72.9440954001667,74.6683152765786,52.0653720704497,106.198664327806,82.8602668616042,78.4148034290379,125.43807816328,39.4691186983221,65.6983377116354,76.4940279522834,151.561146352657,31.861900687712,72.4484932080609,91.4055493518032,74.0338940230158,148.394009671945,29.6211168789262,71.8936911396467,0,0.272746120590835,0,3.04934265323988,1.45782745153634,4.53156377191122,3.10983165046111,3.02785021050754,1.45990943630332,134.546597803642,182.037185508587,40.0591271922194,84.0505949737882,107.560042768768,0,0,0,0,0,0,0.134831308160164,0,0,3.69077727312324,39.2676966649648,199.201821484398,341.060210414457,0,1.96565443335525,5.90789906681404,0,0,19.5587303740319,0,0,0.100528972411631,0.0925884451585296,44.3099295222042,124.792174233549,2.88662684050547,7.30361551342984,33.578886551445,7.36268883581476,10.648666789262,9.13219930726072,0,0,13.7881523408942,31.8245800589363,14.1199604174292,0.93733833986777,0.16798212819886,0.141775097242386,0,0,1.53353071666084,14.7798971368783,25.3579489958091,9.32976519933474,19.1679538044559,20.9562439487791,10.5406504525001,14.5155601712146,11.7217447210047,29.0823158238599,7.60923446004594,12.9147514872885,0.857479297891735,26.3508048211598,20.4901232351642,26.401782895542,92.5585484825689,557.944055528937,45.646348638024,83.2386304910645,47.8434209792284,97.738802219614,73.7615486521047,100.174739310053,66.0558330700642,532.854416494397,145.713539610196,41.0427592210106,67.8798622098263,77.611283547476,17.1820444923964,4.35766729300147,15.4958136332188,6.08118903205952,3.01354254859276,4.21667878966063,43.1324739884849,58.5795872753981,258.1727981237,29.9697304801889,68.8345680543784,49.4208258542112,0,0,0,0,5.08189248444927,5.20559415430487,0.773288812777695,2.01019518401218,3.82763250991898,0,0,0.828831026872071,143.303662327955,244.583384798182,48.2851742185529,79.8608108278299,50.8522618071911,49.8339631507234,93.7131319941706,81.2554469264841,106.881526906313,52.7712663591775,108.268772561276,103.984211057521,65.6840125378706,113.760472485852,81.3249914431728,0,0.215714200818617,0,10.3063374291728,14.9791895559447,19.0505884797699,44.6594054073798,107.73030524822,73.5329447414653,53.8184426873944,69.080478624005,54.3686253465393,23.7468906311986,61.8380872148649,86.4725602274929,69.5617011436963,103.850885836724,43.6951023009447,0,0,0,68.8886688987641,81.9410256030227,110.275632980876,0.451199612907412,0.693138033939733,4.70609861506113,1.46139224653261,0.105551628892876,2.27466768141793,0.680374821106063,2.15915916102139,10.7959076883203,6.77366093859632,22.5760398234684,0.254876273045038,1.66215201785745,0.447749509444357,0.219259876645935,0.522870902049801,1.02580050046556,2.62411716559765,2.92840555197873,12.4679624093744,0,0.165018999841176,5.74265537996172,5.20048196829217,72.3077684298718,68.926222142283,35.7392791705975,49.735190611266,23.9835636123083,12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| ||
|short_description=p1@EMILIN1 | |short_description=p1@EMILIN1 | ||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p1@EMILIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMILIN1_5end |
Coexpression cluster: | C1901_Cardiac_tridermal_Mesenchymal_sacrococcigeal_Hepatic_Smooth_Myoblast |
Association with transcript: | -9bp_to_uc002rii.3, uc010eyq.1_5end |
EntrezGene: | EMILIN1 |
HGNC: | 19880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.06e-24 | 58 |
myoblast | 8.06e-24 | 58 |
multi-potent skeletal muscle stem cell | 8.06e-24 | 58 |
muscle cell | 3.22e-23 | 55 |
electrically responsive cell | 7.88e-20 | 61 |
electrically active cell | 7.88e-20 | 61 |
fibroblast | 8.37e-20 | 76 |
smooth muscle cell | 3.17e-18 | 43 |
smooth muscle myoblast | 3.17e-18 | 43 |
vascular associated smooth muscle cell | 2.15e-12 | 32 |
multi fate stem cell | 2.50e-10 | 427 |
somatic stem cell | 3.35e-09 | 433 |
stem cell | 6.03e-09 | 441 |
mesodermal cell | 2.13e-08 | 121 |
skin fibroblast | 2.06e-07 | 23 |