FFCP PHASE1:Hg19::chr10:119302268..119302282,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:119302268..119302282,+ to FFCP PHASE1:Hg19::chr10:119302268..119302282,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2018 | |EntrezGene=2018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3341 | |HGNC=3341 | ||
|TSSclassifier=strong | |||
|UniProt=G3V305,Q04743 | |UniProt=G3V305,Q04743 | ||
|association_with_transcript=312bp_to_ENST00000553456,NM_001165924,NM_004098,uc001ldh.3,uc001ldi.3_5end | |||
|cluster_id=chr10:119302268..119302282,+ | |||
|coexpression_cluster_id=C718 | |||
|description=CAGE_peak_4_at_EMX2_5end | |||
|id=chr10:119302268..119302282,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.58e-13!23 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.78e-08;3!CL:0002620;1.55e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.32e-08,3;CL:0002620,1.72e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.23e-07;5!DOID:450;3.23e-07;5!DOID:66;3.23e-07;5!DOID:423;3.23e-07;5!DOID:0080000;3.23e-07;5!DOID:11722;3.23e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.62e-07,5;DOID:450,4.62e-07,5;DOID:66,4.62e-07,5;DOID:423,4.62e-07,5;DOID:0080000,4.62e-07,5;DOID:11722,4.62e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001893!7.28e-38!34;UBERON:0002780!1.25e-37!41;UBERON:0001890!1.25e-37!41;UBERON:0006240!1.25e-37!41;UBERON:0002791!9.76e-37!33;UBERON:0003080!2.10e-36!42;UBERON:0001869!2.45e-36!32;UBERON:0002020!3.56e-35!34;UBERON:0003528!3.56e-35!34;UBERON:0007023!1.59e-33!115;UBERON:0001049!5.00e-33!57;UBERON:0005068!5.00e-33!57;UBERON:0006241!5.00e-33!57;UBERON:0007135!5.00e-33!57;UBERON:0002616!2.02e-31!59;UBERON:0001017!1.13e-30!82;UBERON:0005743!8.06e-30!86;UBERON:0000956!8.00e-29!25;UBERON:0000203!8.00e-29!25;UBERON:0000073!1.48e-27!94;UBERON:0001016!1.48e-27!94;UBERON:0003056!1.52e-27!61;UBERON:0000955!5.78e-27!69;UBERON:0006238!5.78e-27!69;UBERON:0002619!2.75e-25!22;UBERON:0002346!9.10e-25!90;UBERON:0003075!3.18e-24!86;UBERON:0007284!3.18e-24!86;UBERON:0001950!8.58e-23!20;UBERON:0000033!1.95e-15!123;UBERON:0000153!2.09e-15!129;UBERON:0007811!2.09e-15!129;UBERON:0000924!3.41e-15!173;UBERON:0006601!3.41e-15!173;UBERON:0004121!1.38e-14!169;UBERON:0000475!3.93e-14!365;UBERON:0002420!1.16e-10!9;UBERON:0007245!1.16e-10!9;UBERON:0010009!1.16e-10!9;UBERON:0010011!1.16e-10!9;UBERON:0000454!1.16e-10!9;UBERON:0002199!3.05e-09!45;UBERON:0002416!3.05e-09!45;UBERON:0002097!3.23e-09!40;UBERON:0000200!1.06e-08!6;UBERON:0001871!1.46e-08!7;UBERON:0009663!2.97e-08!7;UBERON:0002308!6.28e-08!9;UBERON:0000125!6.28e-08!9;UBERON:0000064!6.88e-08!219;UBERON:0000468!1.06e-07!659;UBERON:0000349!1.27e-07!5;UBERON:0000062!3.06e-07!511;UBERON:0002021!4.09e-07!5;UBERON:0001872!4.46e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.03e-55;32!UBERON:0001893;5.03e-54;34!UBERON:0002791;2.18e-52;32!UBERON:0000956;1.16e-51;25!UBERON:0000203;1.16e-51;25!UBERON:0003528;5.27e-51;34!UBERON:0002020;5.27e-51;34!UBERON:0002619;3.73e-45;22!UBERON:0002780;3.66e-42;41!UBERON:0001890;3.66e-42;41!UBERON:0001950;1.36e-40;20!UBERON:0000073;2.17e-27;53!UBERON:0002616;2.17e-27;53!UBERON:0001017;1.75e-17;75!UBERON:0000955;1.83e-17;68!UBERON:0000200;1.76e-14;6!UBERON:0001016;7.89e-14;83!UBERON:0000349;1.63e-12;5!UBERON:0001871;1.93e-12;6!UBERON:0002420;4.71e-12;9!UBERON:0007245;4.71e-12;9!UBERON:0010009;4.71e-12;9!UBERON:0010011;4.71e-12;9!UBERON:0000454;4.71e-12;9!UBERON:0002021;9.70e-12;5!UBERON:0001872;1.35e-11;5!UBERON:0000369;7.10e-10;4!UBERON:0002435;7.10e-10;4!UBERON:0000204;7.10e-10;4!UBERON:0007023;1.07e-09;114!UBERON:0006947;7.55e-09;3!UBERON:0004054;7.55e-09;3!UBERON:0000125;1.66e-08;9!UBERON:0002308;1.66e-08;9!UBERON:0009663;4.25e-08;7!UBERON:0001870;5.37e-08;3!UBERON:0005383;6.79e-08;3!UBERON:0005382;6.79e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.24e-61,32;UBERON:0001893,1.66e-61,34;UBERON:0002780,8.40e-60,41;UBERON:0001890,8.40e-60,41;UBERON:0003080,8.40e-60,41;UBERON:0006240,8.40e-60,41;UBERON:0002791,1.71e-57,32;UBERON:0003528,2.98e-57,34;UBERON:0002020,2.98e-57,34;UBERON:0000956,1.18e-51,25;UBERON:0000203,1.18e-51,25;UBERON:0000073,2.07e-49,53;UBERON:0002616,2.07e-49,53;UBERON:0001049,3.23e-46,56;UBERON:0005068,3.23e-46,56;UBERON:0006241,3.23e-46,56;UBERON:0007135,3.23e-46,56;UBERON:0002619,3.46e-45,22;UBERON:0003056,4.43e-44,61;UBERON:0001950,1.26e-40,20;UBERON:0001017,1.84e-40,81;UBERON:0000955,6.46e-38,68;UBERON:0006238,6.46e-38,68;UBERON:0001016,4.17e-37,89;UBERON:0003075,1.25e-33,82;UBERON:0007284,1.25e-33,82;UBERON:0002346,1.27e-33,86;UBERON:0007023,1.95e-29,114;UBERON:0010371,3.12e-27,104;UBERON:0004121,8.92e-20,171;UBERON:0000924,8.92e-20,171;UBERON:0006601,8.92e-20,171;UBERON:0010314,6.65e-18,132;UBERON:0000200,1.65e-14,6;UBERON:0000349,1.47e-12,5;UBERON:0001871,1.69e-12,6;UBERON:0002420,4.26e-12,9;UBERON:0007245,4.26e-12,9;UBERON:0010009,4.26e-12,9;UBERON:0010011,4.26e-12,9;UBERON:0000454,4.26e-12,9;UBERON:0002021,1.21e-11,5;UBERON:0001872,1.41e-11,5;UBERON:0011216,1.88e-11,223;UBERON:0000369,6.64e-10,4;UBERON:0002435,6.64e-10,4;UBERON:0000204,6.64e-10,4;UBERON:0010082,6.64e-10,4;UBERON:0000025,8.77e-10,192;UBERON:0006947,7.47e-09,3;UBERON:0004054,7.47e-09,3;UBERON:0000125,1.68e-08,9;UBERON:0002308,1.68e-08,9;UBERON:0009663,4.33e-08,7;UBERON:0001870,5.20e-08,3;UBERON:0005383,5.98e-08,3;UBERON:0005382,5.98e-08,3;UBERON:0004111,1.43e-07,240 | |||
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| ||
|short_description=p4@EMX2 | |||
}} | }} |
Latest revision as of 15:51, 16 September 2015
Short description: | p4@EMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EMX2_5end |
Coexpression cluster: | C718_epididymis_seminal_uterus_cervix_ductus_peripheral_colon |
Association with transcript: | 312bp_to_ENST00000553456, NM_001165924, NM_004098, uc001ldh.3, uc001ldi.3_5end |
EntrezGene: | EMX2 |
HGNC: | 3341 |
UniProt: | G3V305Q04743 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.32e-08 | 3 |
skin fibroblast | 1.72e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.62e-07 | 5 |
myotonic disease | 4.62e-07 | 5 |
muscle tissue disease | 4.62e-07 | 5 |
myopathy | 4.62e-07 | 5 |
muscular disease | 4.62e-07 | 5 |
myotonic dystrophy | 4.62e-07 | 5 |