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FFCP PHASE1:Hg19::chrX:9881045..9881073,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=357
|EntrezGene=357
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=630
|HGNC=630
|TSSclassifier=not
|TSSclassifier=strong
|UniProt=C9IZC6,B3KU73
|UniProt=C9IZC6,B3KU73
|association_with_transcript=322bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end
|association_with_transcript=322bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end
|cluster_id=chrX:9881045..9881073,+
|coexpression_cluster_id=C3
|coexpression_cluster_id=C3
|description=CAGE_peak_7_at_SHROOM2_5end
|description=CAGE_peak_7_at_SHROOM2_5end

Latest revision as of 15:46, 16 September 2015

Short description:p7@SHROOM2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SHROOM2_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: 322bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end
EntrezGene:SHROOM2
HGNC: 630
UniProt: C9IZC6B3KU73
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data