FFCP PHASE1:Hg19::chr9:139981401..139981451,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139981401..139981451,+ to FFCP PHASE1:Hg19::chr9:139981401..139981451,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11253 | |EntrezGene=11253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6823 | |HGNC=6823 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKM7 | |UniProt=Q9UKM7 | ||
|association_with_transcript=0bp_to_ENST00000544448,NM_016219,uc004clc.2,uc004cld.2,uc010ncc.2,uc011meo.1,uc011mep.1_5end | |||
|cluster_id=chr9:139981401..139981451,+ | |||
|coexpression_cluster_id=C4191 | |||
|description=CAGE_peak_1_at_MAN1B1_5end | |||
|id=chr9:139981401..139981451,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.04e-25!180;CL:0000220!2.13e-17!246;CL:0002321!8.62e-17!248;CL:0000183!3.17e-15!59;CL:0000222!7.00e-15!119;CL:0000680!6.33e-14!57;CL:0000056!6.33e-14!57;CL:0000355!6.33e-14!57;CL:0000192!2.06e-13!42;CL:0000514!2.06e-13!42;CL:0000187!3.71e-13!54;CL:0000057!4.66e-11!75;CL:0000359!6.96e-11!32;CL:0000393!1.32e-10!60;CL:0000211!1.32e-10!60;CL:0000548!7.53e-10!679;CL:0000004!7.53e-10!679;CL:0000255!7.53e-10!679;CL:0000066!1.08e-09!254;CL:0000012!4.09e-09!682;CL:0000144!3.84e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.27e-10;32!CL:0000192;1.12e-09;43!CL:0000134;1.95e-07;55!CL:0000187;4.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.97e-17,250;CL:0000222,4.43e-15,121;CL:0000680,4.36e-14,58;CL:0000056,4.36e-14,58;CL:0000355,4.36e-14,58;CL:0000192,1.48e-13,43;CL:0000514,1.48e-13,43;CL:0000187,2.56e-13,55;CL:0000057,2.16e-11,76;CL:0000359,6.96e-11,32;CL:0000393,9.03e-11,61;CL:0000211,9.03e-11,61;CL:0000066,1.48e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-09;43!CL:0000355;1.18e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.09e-19!365;UBERON:0002100!1.21e-15!216;UBERON:0005256!3.20e-12!143;UBERON:0000486!5.71e-12!82;UBERON:0000119!5.76e-12!312;UBERON:0000483!1.08e-11!309;UBERON:0001134!1.64e-11!61;UBERON:0002036!1.64e-11!61;UBERON:0003082!1.64e-11!61;UBERON:0002049!2.37e-11!79;UBERON:0007798!2.37e-11!79;UBERON:0004290!5.44e-11!70;UBERON:0003914!5.77e-11!118;UBERON:0000914!1.05e-10!83;UBERON:0002329!1.05e-10!83;UBERON:0003077!1.05e-10!83;UBERON:0003059!1.05e-10!83;UBERON:0007282!1.05e-10!83;UBERON:0009618!1.05e-10!83;UBERON:0007285!1.05e-10!83;UBERON:0002385!1.65e-10!63;UBERON:0001015!1.65e-10!63;UBERON:0000383!1.65e-10!63;UBERON:0000481!2.16e-10!347;UBERON:0001637!3.09e-10!42;UBERON:0003509!3.09e-10!42;UBERON:0004572!3.09e-10!42;UBERON:0000490!4.59e-10!138;UBERON:0004573!4.03e-09!33;UBERON:0004571!4.03e-09!33;UBERON:0000468!8.05e-09!659;UBERON:0003104!8.12e-09!238;UBERON:0009142!8.12e-09!238;UBERON:0009569!9.67e-09!113;UBERON:0004872!9.73e-09!84;UBERON:0000055!1.93e-08!69;UBERON:0001981!2.55e-08!60;UBERON:0007500!2.55e-08!60;UBERON:0004537!2.55e-08!60;UBERON:0006965!2.55e-08!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.59e-08;33!UBERON:0004571;2.59e-08;33!UBERON:0001637;6.65e-08;42!UBERON:0003509;6.65e-08;42!UBERON:0004572;6.65e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.77e-15,199;UBERON:0007503,3.44e-13,78;UBERON:0003104,7.09e-13,160;UBERON:0009142,7.09e-13,160;UBERON:0000119,1.55e-12,309;UBERON:0000483,2.93e-12,306;UBERON:0000486,3.88e-12,83;UBERON:0001134,1.12e-11,62;UBERON:0002036,1.12e-11,62;UBERON:0003082,1.12e-11,62;UBERON:0007524,2.20e-11,73;UBERON:0005256,2.87e-11,122;UBERON:0002329,3.72e-11,71;UBERON:0003059,3.72e-11,71;UBERON:0007282,3.72e-11,71;UBERON:0004290,3.72e-11,71;UBERON:0009618,3.72e-11,71;UBERON:0003077,4.48e-11,72;UBERON:0007285,4.48e-11,72;UBERON:0002049,5.08e-11,78;UBERON:0007798,5.08e-11,78;UBERON:0003914,8.34e-11,117;UBERON:0002385,1.13e-10,64;UBERON:0001015,1.13e-10,64;UBERON:0000383,1.13e-10,64;UBERON:0000490,3.03e-10,148;UBERON:0001637,3.09e-10,42;UBERON:0003509,3.09e-10,42;UBERON:0004572,3.09e-10,42;UBERON:0004573,4.03e-09,33;UBERON:0004571,4.03e-09,33;UBERON:0004872,1.91e-08,83;UBERON:0009569,2.01e-08,112;UBERON:0000055,3.90e-08,68;UBERON:0007500,5.27e-08,59;UBERON:0001981,5.27e-08,59;UBERON:0004537,5.27e-08,59;UBERON:0006965,5.27e-08,59 | |||
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915496 | ||
|short_description=p1@MAN1B1 | |||
}} | }} |
Latest revision as of 15:44, 16 September 2015
Short description: | p1@MAN1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAN1B1_5end |
Coexpression cluster: | C4191_Smooth_Mesenchymal_leiomyoma_Fibroblast_Preadipocyte_Adipocyte_Placental |
Association with transcript: | 0bp_to_ENST00000544448, NM_016219, uc004clc.2, uc004cld.2, uc010ncc.2, uc011meo.1, uc011mep.1_5end |
EntrezGene: | MAN1B1 |
HGNC: | 6823 |
UniProt: | Q9UKM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.97e-17 | 250 |
mesodermal cell | 4.43e-15 | 121 |
muscle precursor cell | 4.36e-14 | 58 |
myoblast | 4.36e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.36e-14 | 58 |
smooth muscle cell | 1.48e-13 | 43 |
smooth muscle myoblast | 1.48e-13 | 43 |
muscle cell | 2.56e-13 | 55 |
fibroblast | 2.16e-11 | 76 |
vascular associated smooth muscle cell | 6.96e-11 | 32 |
electrically responsive cell | 9.03e-11 | 61 |
electrically active cell | 9.03e-11 | 61 |
epithelial cell | 1.48e-09 | 253 |