FFCP PHASE1:Hg19::chr14:93388970..93388985,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:93388970..93388985,+ to FFCP PHASE1:Hg19::chr14:93388970..93388985,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1113 | |EntrezGene=1113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1929 | |HGNC=1929 | ||
|TSSclassifier=strong | |||
|UniProt=P10645 | |UniProt=P10645 | ||
|association_with_transcript=-439bp_to_ENST00000216492_5end | |||
|cluster_id=chr14:93388970..93388985,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_3_at_CHGA_5end | |||
|id=chr14:93388970..93388985,+ | |||
|ontology_enrichment_celltype=CL:0000242!7.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000319;9.43e-10;1!CL:0000167;1.26e-09;1!CL:0000164;1.26e-09;1!CL:0000502;1.26e-09;1!CL:0000172;1.26e-09;1!CL:0000173;1.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.44e-10,1;CL:0000167,1.21e-09,1;CL:0000164,1.21e-09,1;CL:0000502,1.21e-09,1;CL:0000172,1.21e-09,1;CL:0000173,1.21e-09,1;CL:0002351,1.21e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.26e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;9.43e-10;1!DOID:4430;1.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.44e-10,1;DOID:4430,1.21e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.98e-50!57;UBERON:0005068!7.98e-50!57;UBERON:0006241!7.98e-50!57;UBERON:0007135!7.98e-50!57;UBERON:0002780!2.07e-48!41;UBERON:0001890!2.07e-48!41;UBERON:0006240!2.07e-48!41;UBERON:0003080!4.26e-47!42;UBERON:0002020!5.11e-47!34;UBERON:0003528!5.11e-47!34;UBERON:0001893!7.25e-47!34;UBERON:0001869!2.64e-46!32;UBERON:0002616!6.89e-45!59;UBERON:0002791!1.71e-44!33;UBERON:0002619!2.45e-43!22;UBERON:0000955!6.83e-42!69;UBERON:0006238!6.83e-42!69;UBERON:0001017!9.88e-41!82;UBERON:0007023!3.57e-40!115;UBERON:0001950!1.91e-38!20;UBERON:0005743!2.08e-38!86;UBERON:0000956!1.03e-37!25;UBERON:0000203!1.03e-37!25;UBERON:0000073!6.56e-36!94;UBERON:0001016!6.56e-36!94;UBERON:0003075!3.46e-32!86;UBERON:0007284!3.46e-32!86;UBERON:0002346!2.37e-30!90;UBERON:0003056!3.15e-30!61;UBERON:0000033!1.22e-22!123;UBERON:0000153!1.58e-22!129;UBERON:0007811!1.58e-22!129;UBERON:0004121!3.08e-19!169;UBERON:0000924!1.48e-18!173;UBERON:0006601!1.48e-18!173;UBERON:0001871!2.70e-18!7;UBERON:0000349!2.62e-14!5;UBERON:0000200!7.99e-13!6;UBERON:0000025!7.65e-12!194;UBERON:0000369!1.39e-11!4;UBERON:0002435!1.39e-11!4;UBERON:0000204!1.39e-11!4;UBERON:0010082!1.39e-11!4;UBERON:0002420!5.99e-11!9;UBERON:0007245!5.99e-11!9;UBERON:0010009!5.99e-11!9;UBERON:0010011!5.99e-11!9;UBERON:0000454!5.99e-11!9;UBERON:0002308!9.61e-11!9;UBERON:0000125!9.61e-11!9;UBERON:0002021!3.23e-10!5;UBERON:0002771!4.38e-10!3;UBERON:0001872!4.92e-10!5;UBERON:0005383!4.41e-09!3;UBERON:0005382!4.41e-09!3;UBERON:0000988!7.53e-09!3;UBERON:0000064!8.36e-09!219;UBERON:0002298!1.72e-08!8;UBERON:0004111!1.92e-08!241;UBERON:0000477!2.15e-07!286;UBERON:0000483!2.57e-07!309;UBERON:0000062!2.64e-07!511;UBERON:0000007!2.70e-07!2;UBERON:0000119!3.75e-07!312;UBERON:0001876!7.04e-07!2;UBERON:0001873!7.69e-07!2;UBERON:0010122!7.69e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.12e-52;20!UBERON:0002619;2.95e-47;22!UBERON:0000956;1.39e-41;25!UBERON:0000203;1.39e-41;25!UBERON:0001869;5.68e-28;32!UBERON:0001893;2.31e-27;34!UBERON:0002791;6.33e-27;32!UBERON:0003528;1.78e-26;34!UBERON:0002020;1.78e-26;34!UBERON:0000200;3.54e-21;6!UBERON:0002780;6.96e-19;41!UBERON:0001890;6.96e-19;41!UBERON:0001871;1.81e-18;6!UBERON:0002771;1.05e-16;2!UBERON:0002021;6.19e-15;5!UBERON:0000073;1.02e-12;53!UBERON:0002616;1.02e-12;53!UBERON:0001870;1.87e-11;3!UBERON:0000955;2.70e-09;68!UBERON:0002581;3.25e-09;1!UBERON:0002902;3.25e-09;1!UBERON:0002022;3.25e-09;1!UBERON:0003112;3.25e-09;1!UBERON:0011158;3.25e-09;1!UBERON:0009899;3.25e-09;1!UBERON:0003128;3.25e-09;1!UBERON:0001703;3.25e-09;1!UBERON:0002241;3.25e-09;1!UBERON:0001017;2.36e-08;75!UBERON:0002108;1.94e-07;4!UBERON:0001872;3.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.40e-52,20;UBERON:0002619,1.73e-47,22;UBERON:0000956,8.70e-42,25;UBERON:0000203,8.70e-42,25;UBERON:0002791,1.66e-32,32;UBERON:0001869,1.66e-32,32;UBERON:0003528,1.55e-30,34;UBERON:0002020,1.55e-30,34;UBERON:0001893,1.55e-30,34;UBERON:0002780,1.06e-29,41;UBERON:0001890,1.06e-29,41;UBERON:0003080,1.06e-29,41;UBERON:0006240,1.06e-29,41;UBERON:0000073,1.32e-22,53;UBERON:0002616,1.32e-22,53;UBERON:0000200,2.58e-21,6;UBERON:0001049,2.69e-21,56;UBERON:0005068,2.69e-21,56;UBERON:0006241,2.69e-21,56;UBERON:0007135,2.69e-21,56;UBERON:0000955,8.32e-20,68;UBERON:0006238,8.32e-20,68;UBERON:0003056,2.13e-19,61;UBERON:0001871,1.51e-18,6;UBERON:0002771,9.68e-17,2;UBERON:0001017,2.58e-16,81;UBERON:0002021,4.23e-15,5;UBERON:0001016,1.78e-14,89;UBERON:0003075,6.49e-14,82;UBERON:0007284,6.49e-14,82;UBERON:0002346,3.61e-13,86;UBERON:0010371,2.46e-12,104;UBERON:0001870,2.71e-11,3;UBERON:0007023,3.22e-11,114;UBERON:0002581,1.84e-09,1;UBERON:0003112,1.99e-09,1;UBERON:0011158,1.99e-09,1;UBERON:0003128,1.99e-09,1;UBERON:0001703,1.99e-09,1;UBERON:0002241,1.99e-09,1;UBERON:0004761,1.99e-09,1;UBERON:0009617,1.99e-09,1;UBERON:0011216,2.50e-09,223;UBERON:0002902,2.77e-09,1;UBERON:0009899,2.77e-09,1;UBERON:0010314,3.09e-09,132;UBERON:0002022,4.15e-09,1;UBERON:0004121,1.36e-07,171;UBERON:0000924,1.36e-07,171;UBERON:0006601,1.36e-07,171;UBERON:0001872,2.28e-07,5;UBERON:0002108,2.36e-07,4 | |||
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| ||
|short_description=p3@CHGA | |||
}} | }} |
Latest revision as of 15:34, 16 September 2015
Short description: | p3@CHGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHGA_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -439bp_to_ENST00000216492_5end |
EntrezGene: | CHGA |
HGNC: | 1929 |
UniProt: | P10645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.44e-10 | 1 |
peptide hormone secreting cell | 1.21e-09 | 1 |
enteroendocrine cell | 1.21e-09 | 1 |
type D enteroendocrine cell | 1.21e-09 | 1 |
somatostatin secreting cell | 1.21e-09 | 1 |
pancreatic D cell | 1.21e-09 | 1 |
progenitor cell of endocrine pancreas | 1.21e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.44e-10 | 1 |
somatostatinoma | 1.21e-09 | 1 |