FFCP PHASE2:Hg19::chr8:134114832..134114863,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6503 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10902 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10902 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B7Z4J2,E5RJB0,E5RK29,E5RGG0 | ||
|association_with_transcript=0bp_to_ENST00000517648,ENST00000517932,ENST00000519558,ENST00000519747,ENST00000521302_5end | |association_with_transcript=0bp_to_ENST00000517648,ENST00000517932,ENST00000519558,ENST00000519747,ENST00000521302_5end | ||
|cluster_id=chr8:134114832..134114863,- | |cluster_id=chr8:134114832..134114863,- |
Latest revision as of 15:31, 16 September 2015
Short description: | p9@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLA_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000517648, ENST00000517932, ENST00000519558, ENST00000519747, ENST00000521302_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | B7Z4J2E5RJB0E5RK29E5RGG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@SLA |
---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.04e-33 | 8 |
neuron | 1.10e-25 | 6 |
neuroblast | 1.10e-25 | 6 |
electrically signaling cell | 1.10e-25 | 6 |
neural cell | 2.94e-10 | 25 |
neurectodermal cell | 7.28e-07 | 59 |
light melanocyte | 9.64e-07 | 3 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
insula | 1.70e-17 | 1 |
central nervous system | 1.52e-15 | 81 |
nervous system | 5.86e-14 | 89 |
neocortex | 5.96e-13 | 20 |
regional part of cerebral cortex | 7.46e-12 | 22 |
cerebral cortex | 1.60e-10 | 25 |
pallium | 1.60e-10 | 25 |
regional part of telencephalon | 2.39e-08 | 32 |
cerebral hemisphere | 2.39e-08 | 32 |
brain grey matter | 6.93e-08 | 34 |
Showing 1 to 10 of 16 entries