FFCP PHASE1:Hg19::chr10:119134918..119134986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118987 | |EntrezGene=118987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26974 | |HGNC=26974 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEN9 | |UniProt=Q8NEN9 | ||
|association_with_transcript=0bp_to_ENST00000334464,NM_173791,uc001lde.1_5end | |association_with_transcript=0bp_to_ENST00000334464,NM_173791,uc001lde.1_5end | ||
|cluster_id=chr10:119134918..119134986,- | |||
|description=CAGE_peak_1_at_PDZD8_5end | |description=CAGE_peak_1_at_PDZD8_5end | ||
|id=chr10:119134918..119134986,- | |id=chr10:119134918..119134986,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-30!115;UBERON:0001049!3.23e-18!57;UBERON:0005068!3.23e-18!57;UBERON:0006241!3.23e-18!57;UBERON:0007135!3.23e-18!57;UBERON:0001017!3.35e-16!82;UBERON:0005743!4.53e-16!86;UBERON:0003080!8.12e-16!42;UBERON:0002780!1.91e-15!41;UBERON:0001890!1.91e-15!41;UBERON:0006240!1.91e-15!41;UBERON:0000073!7.84e-15!94;UBERON:0001016!7.84e-15!94;UBERON:0000955!1.39e-14!69;UBERON:0006238!1.39e-14!69;UBERON:0002616!2.04e-14!59;UBERON:0002020!3.42e-13!34;UBERON:0003528!3.42e-13!34;UBERON:0001893!4.74e-13!34;UBERON:0002791!1.20e-12!33;UBERON:0003075!2.02e-12!86;UBERON:0007284!2.02e-12!86;UBERON:0001869!5.21e-12!32;UBERON:0002346!7.34e-12!90;UBERON:0000033!2.22e-11!123;UBERON:0000153!6.06e-11!129;UBERON:0007811!6.06e-11!129;UBERON:0003056!4.17e-10!61;UBERON:0004121!1.61e-09!169;UBERON:0000924!2.73e-09!173;UBERON:0006601!2.73e-09!173;UBERON:0000956!5.90e-09!25;UBERON:0000203!5.90e-09!25;UBERON:0002619!2.03e-08!22;UBERON:0001950!1.07e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!1.07e-30!115;UBERON:0001049!3.23e-18!57;UBERON:0005068!3.23e-18!57;UBERON:0006241!3.23e-18!57;UBERON:0007135!3.23e-18!57;UBERON:0001017!3.35e-16!82;UBERON:0005743!4.53e-16!86;UBERON:0003080!8.12e-16!42;UBERON:0002780!1.91e-15!41;UBERON:0001890!1.91e-15!41;UBERON:0006240!1.91e-15!41;UBERON:0000073!7.84e-15!94;UBERON:0001016!7.84e-15!94;UBERON:0000955!1.39e-14!69;UBERON:0006238!1.39e-14!69;UBERON:0002616!2.04e-14!59;UBERON:0002020!3.42e-13!34;UBERON:0003528!3.42e-13!34;UBERON:0001893!4.74e-13!34;UBERON:0002791!1.20e-12!33;UBERON:0003075!2.02e-12!86;UBERON:0007284!2.02e-12!86;UBERON:0001869!5.21e-12!32;UBERON:0002346!7.34e-12!90;UBERON:0000033!2.22e-11!123;UBERON:0000153!6.06e-11!129;UBERON:0007811!6.06e-11!129;UBERON:0003056!4.17e-10!61;UBERON:0004121!1.61e-09!169;UBERON:0000924!2.73e-09!173;UBERON:0006601!2.73e-09!173;UBERON:0000956!5.90e-09!25;UBERON:0000203!5.90e-09!25;UBERON:0002619!2.03e-08!22;UBERON:0001950!1.07e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.50e-11;41!UBERON:0001890;2.50e-11;41!UBERON:0003528;2.97e-11;34!UBERON:0002020;2.97e-11;34!UBERON:0001893;3.94e-11;34!UBERON:0002791;4.52e-11;32!UBERON:0001869;7.14e-11;32!UBERON:0000073;8.31e-10;53!UBERON:0002616;8.31e-10;53!UBERON:0000956;6.89e-09;25!UBERON:0000203;6.89e-09;25!UBERON:0007023;7.13e-09;114!UBERON:0002619;2.28e-08;22!UBERON:0001950;1.24e-07;20!UBERON:0001017;3.80e-07;75!UBERON:0001016;6.45e-07;83!UBERON:0000955;7.51e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.60e-30,114;UBERON:0001049,7.66e-18,56;UBERON:0005068,7.66e-18,56;UBERON:0006241,7.66e-18,56;UBERON:0007135,7.66e-18,56;UBERON:0000073,9.57e-17,53;UBERON:0002616,9.57e-17,53;UBERON:0001017,7.52e-16,81;UBERON:0002780,1.91e-15,41;UBERON:0001890,1.91e-15,41;UBERON:0003080,1.91e-15,41;UBERON:0006240,1.91e-15,41;UBERON:0001016,1.48e-14,89;UBERON:0000955,3.12e-14,68;UBERON:0006238,3.12e-14,68;UBERON:0003528,3.42e-13,34;UBERON:0002020,3.42e-13,34;UBERON:0001893,4.74e-13,34;UBERON:0003075,2.15e-12,82;UBERON:0007284,2.15e-12,82;UBERON:0002791,3.77e-12,32;UBERON:0001869,5.21e-12,32;UBERON:0002346,8.24e-12,86;UBERON:0011216,2.21e-11,223;UBERON:0010371,8.26e-11,104;UBERON:0003056,4.44e-10,61;UBERON:0004121,2.14e-09,171;UBERON:0000924,2.14e-09,171;UBERON:0006601,2.14e-09,171;UBERON:0000956,5.90e-09,25;UBERON:0000203,5.90e-09,25;UBERON:0002619,2.03e-08,22;UBERON:0001950,1.07e-07,20 | |||
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| ||
|short_description=p1@PDZD8 | |short_description=p1@PDZD8 | ||
}} | }} |
Latest revision as of 15:28, 16 September 2015
Short description: | p1@PDZD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDZD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334464, NM_173791, uc001lde.1_5end |
EntrezGene: | PDZD8 |
HGNC: | 26974 |
UniProt: | Q8NEN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.60e-30 | 114 |
neural tube | 7.66e-18 | 56 |
neural rod | 7.66e-18 | 56 |
future spinal cord | 7.66e-18 | 56 |
neural keel | 7.66e-18 | 56 |
regional part of nervous system | 9.57e-17 | 53 |
regional part of brain | 9.57e-17 | 53 |
central nervous system | 7.52e-16 | 81 |
regional part of forebrain | 1.91e-15 | 41 |
forebrain | 1.91e-15 | 41 |
anterior neural tube | 1.91e-15 | 41 |
future forebrain | 1.91e-15 | 41 |
nervous system | 1.48e-14 | 89 |
brain | 3.12e-14 | 68 |
future brain | 3.12e-14 | 68 |
brain grey matter | 3.42e-13 | 34 |
gray matter | 3.42e-13 | 34 |
telencephalon | 4.74e-13 | 34 |
neural plate | 2.15e-12 | 82 |
presumptive neural plate | 2.15e-12 | 82 |
regional part of telencephalon | 3.77e-12 | 32 |
cerebral hemisphere | 5.21e-12 | 32 |
neurectoderm | 8.24e-12 | 86 |
organ system subdivision | 2.21e-11 | 223 |
ecto-epithelium | 8.26e-11 | 104 |
pre-chordal neural plate | 4.44e-10 | 61 |
ectoderm-derived structure | 2.14e-09 | 171 |
ectoderm | 2.14e-09 | 171 |
presumptive ectoderm | 2.14e-09 | 171 |
cerebral cortex | 5.90e-09 | 25 |
pallium | 5.90e-09 | 25 |
regional part of cerebral cortex | 2.03e-08 | 22 |
neocortex | 1.07e-07 | 20 |