FFCP PHASE1:Hg19::chr20:45891250..45891274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23613 | |EntrezGene=23613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9397 | |HGNC=9397 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULU4 | |UniProt=Q9ULU4 | ||
|association_with_transcript=-178bp_to_AF233453_5end | |association_with_transcript=-178bp_to_AF233453_5end | ||
|cluster_id=chr20:45891250..45891274,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_32_at_ZMYND8_5end | |description=CAGE_peak_32_at_ZMYND8_5end | ||
|id=chr20:45891250..45891274,- | |id=chr20:45891250..45891274,- | ||
|ontology_enrichment_celltype=CL:0000945!2.22e-30!24;CL:0000826!2.22e-30!24;CL:0000817!2.69e-15!3;CL:0000542!2.81e-14!53;CL:0000051!2.81e-14!53;CL:0000838!1.87e-12!52;CL:0000236!9.03e-12!14;CL:0000785!7.90e-11!2;CL:0000955!7.90e-11!2;CL:0000818!7.90e-11!2;CL:0000954!7.90e-11!2;CL:0000816!7.90e-11!2 | |ontology_enrichment_celltype=CL:0000945!2.22e-30!24;CL:0000826!2.22e-30!24;CL:0000817!2.69e-15!3;CL:0000542!2.81e-14!53;CL:0000051!2.81e-14!53;CL:0000838!1.87e-12!52;CL:0000236!9.03e-12!14;CL:0000785!7.90e-11!2;CL:0000955!7.90e-11!2;CL:0000818!7.90e-11!2;CL:0000954!7.90e-11!2;CL:0000816!7.90e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.78e-26;1!CL:0000786;2.78e-26;1!CL:0000945;4.46e-26;24!CL:0000817;7.62e-26;1!CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1!CL:0000047;1.21e-13;2!CL:0000236;1.47e-08;13!CL:0000542;2.84e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,5.84e-74,3;CL:0000785,3.11e-50,2;CL:0000955,3.11e-50,2;CL:0000818,3.11e-50,2;CL:0000954,3.11e-50,2;CL:0000816,3.11e-50,2;CL:0000946,2.78e-26,1;CL:0000786,2.78e-26,1;CL:0000980,2.78e-26,1;CL:0000945,4.95e-26,24;CL:0000826,4.95e-26,24;CL:0000819,7.62e-26,1;CL:0000236,1.48e-16,14;CL:0000838,3.40e-12,52;CL:0000542,5.72e-12,53;CL:0000051,5.72e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000954;3.11e-50;2!CL:0000051;2.84e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.09e-11!10;DOID:2531!3.33e-07!51;DOID:0060083!3.33e-07!51 | |ontology_enrichment_disease=DOID:0060058!1.09e-11!10;DOID:2531!3.33e-07!51;DOID:0060083!3.33e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:0060058;4.76e-23;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.62e-26,1;DOID:8675,7.62e-26,1;DOID:0060058,4.76e-23,10;DOID:2531,3.27e-08,51;DOID:0060083,3.27e-08,51 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.30e-09,3;UBERON:0004854,1.30e-09,3;UBERON:0009034,1.30e-09,3;UBERON:0002095,1.30e-09,3;UBERON:0004782,1.30e-09,3;UBERON:0003281,1.30e-09,3;UBERON:0009664,1.30e-09,3;UBERON:0002296,1.30e-09,3;UBERON:0005602,1.30e-09,3;UBERON:0001179,1.30e-09,3;UBERON:0006293,1.30e-09,3 | |||
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| ||
|short_description=p32@ZMYND8 | |short_description=p32@ZMYND8 | ||
}} | }} |
Latest revision as of 15:28, 16 September 2015
Short description: | p32@ZMYND8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_ZMYND8_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -178bp_to_AF233453_5end |
EntrezGene: | ZMYND8 |
HGNC: | 9397 |
UniProt: | Q9ULU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 5.84e-74 | 3 |
mature B cell | 3.11e-50 | 2 |
pre-B-II cell | 3.11e-50 | 2 |
transitional stage B cell | 3.11e-50 | 2 |
small pre-B-II cell | 3.11e-50 | 2 |
immature B cell | 3.11e-50 | 2 |
antibody secreting cell | 2.78e-26 | 1 |
plasma cell | 2.78e-26 | 1 |
plasmablast | 2.78e-26 | 1 |
lymphocyte of B lineage | 4.95e-26 | 24 |
pro-B cell | 4.95e-26 | 24 |
B-1 B cell | 7.62e-26 | 1 |
B cell | 1.48e-16 | 14 |
lymphoid lineage restricted progenitor cell | 3.40e-12 | 52 |
lymphocyte | 5.72e-12 | 53 |
common lymphoid progenitor | 5.72e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.30e-09 | 3 |
gastrointestinal system mesentery | 1.30e-09 | 3 |
stomach region | 1.30e-09 | 3 |
mesentery | 1.30e-09 | 3 |
gastrointestinal system serosa | 1.30e-09 | 3 |
mesentery of stomach | 1.30e-09 | 3 |
gut mesentery | 1.30e-09 | 3 |
dorsal mesentery | 1.30e-09 | 3 |
dorsal mesogastrium | 1.30e-09 | 3 |
peritoneal cavity | 1.30e-09 | 3 |
spleen primordium | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.62e-26 | 1 |
lymphosarcoma | 7.62e-26 | 1 |
lymphoma | 4.76e-23 | 10 |
hematologic cancer | 3.27e-08 | 51 |
immune system cancer | 3.27e-08 | 51 |