FFCP PHASE1:Hg19::chr10:119134340..119134380,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118987 | |EntrezGene=118987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26974 | |HGNC=26974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-348bp_to_ENST00000489491_5end | |association_with_transcript=-348bp_to_ENST00000489491_5end | ||
|cluster_id=chr10:119134340..119134380,- | |||
|coexpression_cluster_id=C307 | |coexpression_cluster_id=C307 | ||
|description=CAGE_peak_7_at_PDZD8_5end | |description=CAGE_peak_7_at_PDZD8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000094!1.26e-09!8;CL:0000081!8.17e-08!11;CL:0000037!1.59e-07!172;CL:0000566!1.59e-07!172 | |ontology_enrichment_celltype=CL:0000094!1.26e-09!8;CL:0000081!8.17e-08!11;CL:0000037!1.59e-07!172;CL:0000566!1.59e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000094;5.82e-35;8!CL:0000775;1.47e-34;3!CL:0000081;1.90e-25;11!CL:0000771;3.91e-23;2!CL:0002032;1.48e-12;1!CL:0000557;1.48e-12;1!CL:0000763;1.94e-07;100 | |ontology_enrichment_celltype_v019=CL:0000094;5.82e-35;8!CL:0000775;1.47e-34;3!CL:0000081;1.90e-25;11!CL:0000771;3.91e-23;2!CL:0002032;1.48e-12;1!CL:0000557;1.48e-12;1!CL:0000763;1.94e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.24e-35,8;CL:0000775,1.24e-34,3;CL:0000081,1.76e-25,11;CL:0000771,3.91e-23,2;CL:0000763,2.10e-15,108;CL:0000049,2.10e-15,108;CL:0002032,9.44e-10,161;CL:0000837,9.44e-10,161;CL:0000037,2.87e-09,168;CL:0000988,1.06e-08,177 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.48e-12;1!UBERON:0007297;6.61e-07;2 | |ontology_enrichment_development_v019=UBERON:0005754;1.48e-12;1!UBERON:0007297;6.61e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;7.02e-13;1!DOID:8552;3.08e-12;1!DOID:8692;3.71e-12;31!DOID:1240;4.44e-08;39 | |ontology_enrichment_disease_v019=DOID:9119;7.02e-13;1!DOID:8552;3.08e-12;1!DOID:8692;3.71e-12;31!DOID:1240;4.44e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,7.03e-13,1;DOID:8692,1.58e-12,31;DOID:8552,1.96e-12,1;DOID:1240,7.00e-10,39;DOID:2531,1.84e-07,51;DOID:0060083,1.84e-07,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.09e-15;3!UBERON:0004054;1.09e-15;3!UBERON:0000998;1.48e-12;1!UBERON:0006868;1.48e-12;1!UBERON:0001000;3.08e-12;1!UBERON:0005352;3.08e-12;1!UBERON:0005904;5.25e-12;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.09e-15;3!UBERON:0004054;1.09e-15;3!UBERON:0000998;1.48e-12;1!UBERON:0006868;1.48e-12;1!UBERON:0001000;3.08e-12;1!UBERON:0005352;3.08e-12;1!UBERON:0005904;5.25e-12;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.80e-16,3;UBERON:0004054,9.80e-16,3;UBERON:0000998,1.75e-12,1;UBERON:0006868,1.75e-12,1;UBERON:0001000,2.20e-12,1;UBERON:0005352,2.20e-12,1;UBERON:0005904,4.83e-12,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0.880801318004542,1.10799081706375,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,0.560508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0,7.49007023947182,2.99161459204025,8.70272578215674,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,1.40398589056729,0,0.156679895773023,5.01268954180134,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0.811367035427949,54.9568747196403,1.4098700508785,0.18714054040822,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,1.66211681900156,0.225595660617181,0,0,0,1.27149263184303,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0,0,0.126621591911757,0.195551382734803,0,0.426905989478705,0.19980960958213,0.432271251462318,0,0,0,0.248505071130865,0.471388069233591,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.985110248992068,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,1.28120759293973,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0.40341013740704,0,0,0,0.295712172434091,0.135075169236789,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.455324382702595,0,0,0,0.40781839786099,0.0657727735628491,0.118193840883968,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,2.54032230114557,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0.617393264863557,0.437119121007915,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.322289439867886,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0,0.303114792872958,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.106727345877715,0,0.269475606319761,0,0.122241444182866,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0.880801318004542,1.10799081706375,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,0.560508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0,7.49007023947182,2.99161459204025,8.70272578215674,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,1.40398589056729,0,0.156679895773023,5.01268954180134,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0.811367035427949,54.9568747196403,1.4098700508785,0.18714054040822,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,1.66211681900156,0.225595660617181,0,0,0,1.27149263184303,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0,0,0.126621591911757,0.195551382734803,0,0.426905989478705,0.19980960958213,0.432271251462318,0,0,0,0.248505071130865,0.471388069233591,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.985110248992068,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,1.28120759293973,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0.40341013740704,0,0,0,0.295712172434091,0.135075169236789,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.455324382702595,0,0,0,0.40781839786099,0.0657727735628491,0.118193840883968,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,2.54032230114557,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0.617393264863557,0.437119121007915,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.322289439867886,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0,0.303114792872958,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.106727345877715,0,0.269475606319761,0,0.122241444182866,0,0,0,0.320568492303233 | ||
|short_description=p7@PDZD8 | |short_description=p7@PDZD8 | ||
}} | }} |
Latest revision as of 15:27, 16 September 2015
Short description: | p7@PDZD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PDZD8_5end |
Coexpression cluster: | C307_acute_chronic_leukemia_CD133_Mast_CD34_anaplastic |
Association with transcript: | -348bp_to_ENST00000489491_5end |
EntrezGene: | PDZD8 |
HGNC: | 26974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.24e-35 | 8 |
neutrophil | 1.24e-34 | 3 |
blood cell | 1.76e-25 | 11 |
eosinophil | 3.91e-23 | 2 |
myeloid cell | 2.10e-15 | 108 |
common myeloid progenitor | 2.10e-15 | 108 |
hematopoietic oligopotent progenitor cell | 9.44e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.44e-10 | 161 |
hematopoietic stem cell | 2.87e-09 | 168 |
hematopoietic cell | 1.06e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.80e-16 | 3 |
internal male genitalia | 9.80e-16 | 3 |
seminal vesicle | 1.75e-12 | 1 |
seminal fluid secreting gland | 1.75e-12 | 1 |
vas deferens | 2.20e-12 | 1 |
spermatic cord | 2.20e-12 | 1 |
duct of male reproductive system | 4.83e-12 | 4 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 7.03e-13 | 1 |
myeloid leukemia | 1.58e-12 | 31 |
chronic myeloid leukemia | 1.96e-12 | 1 |
leukemia | 7.00e-10 | 39 |
hematologic cancer | 1.84e-07 | 51 |
immune system cancer | 1.84e-07 | 51 |