FFCP PHASE1:Hg19::chr12:116715402..116715427,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22962 | |||
|TSSclassifier=strong | |||
|UniProt=Q71F56 | |||
|association_with_transcript=-259bp_to_ENST00000281928_5end | |||
|cluster_id=chr12:116715402..116715427,- | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_3_at_MED13L_5end | |||
|id=chr12:116715402..116715427,- | |||
|ontology_enrichment_celltype=CL:0000738!3.15e-33!140;CL:0000037!5.07e-33!172;CL:0000566!5.07e-33!172;CL:0002032!2.29e-29!165;CL:0000837!2.29e-29!165;CL:0000988!4.37e-29!182;CL:0000766!1.11e-26!76;CL:0000763!3.89e-26!112;CL:0000049!3.89e-26!112;CL:0002087!2.50e-24!119;CL:0002031!2.57e-23!124;CL:0000557!4.29e-23!71;CL:0002057!4.39e-23!42;CL:0002009!4.69e-22!65;CL:0002194!2.21e-21!63;CL:0000576!2.21e-21!63;CL:0000040!2.21e-21!63;CL:0000559!2.21e-21!63;CL:0000839!6.94e-20!70;CL:0000860!2.67e-19!45;CL:0000134!2.33e-08!358;CL:0002320!8.05e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.40e-19;33!CL:0002057;7.40e-19;33!CL:0000576;2.47e-17;48!CL:0000473;3.03e-16;39!CL:0000234;3.03e-16;39!CL:0000766;6.30e-15;69!CL:0000763;1.51e-10;100!CL:0000738;6.99e-09;136!CL:0002087;8.25e-09;104!CL:0000094;3.20e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.35e-40,136;CL:0000037,9.84e-40,168;CL:0002032,1.62e-35,161;CL:0000837,1.62e-35,161;CL:0000988,2.50e-35,177;CL:0000766,1.40e-33,72;CL:0000763,1.95e-32,108;CL:0000049,1.95e-32,108;CL:0002087,2.08e-29,115;CL:0000557,2.21e-29,67;CL:0002031,1.03e-28,120;CL:0002009,6.07e-28,61;CL:0002194,3.39e-27,59;CL:0000576,3.39e-27,59;CL:0000040,3.39e-27,59;CL:0000559,3.39e-27,59;CL:0000839,5.20e-26,66;CL:0000473,1.01e-25,48;CL:0000234,1.01e-25,48;CL:0000860,1.74e-25,42;CL:0002057,1.74e-25,42;CL:0000134,2.24e-09,354;CL:0002320,9.31e-09,361;CL:0000219,2.02e-07,386;CL:0000094,3.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-18;42!CL:0000049;5.20e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.76e-26!102;UBERON:0003061!7.76e-26!102;UBERON:0002193!1.22e-24!112;UBERON:0001474!2.49e-19!86;UBERON:0002371!3.68e-19!80;UBERON:0004765!1.19e-14!101;UBERON:0001434!1.19e-14!101;UBERON:0002405!1.63e-14!115;UBERON:0002384!2.46e-08!375;UBERON:0007023!3.07e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-31,98;UBERON:0003061,1.10e-31,98;UBERON:0002193,1.16e-29,108;UBERON:0002371,5.83e-25,76;UBERON:0001474,2.12e-24,82;UBERON:0002405,4.75e-24,93;UBERON:0004765,2.80e-20,90;UBERON:0001434,6.49e-18,100;UBERON:0002384,2.28e-09,371;UBERON:0007023,9.57e-09,114;UBERON:0003081,9.61e-08,203;UBERON:0002204,1.18e-07,167 | |||
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| |||
|short_description=p3@MED13L | |||
}} |
Latest revision as of 15:24, 16 September 2015
Short description: | p3@MED13L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MED13L_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | -259bp_to_ENST00000281928_5end |
EntrezGene: | MED13L |
HGNC: | 22962 |
UniProt: | Q71F56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.35e-40 | 136 |
hematopoietic stem cell | 9.84e-40 | 168 |
hematopoietic oligopotent progenitor cell | 1.62e-35 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-35 | 161 |
hematopoietic cell | 2.50e-35 | 177 |
myeloid leukocyte | 1.40e-33 | 72 |
myeloid cell | 1.95e-32 | 108 |
common myeloid progenitor | 1.95e-32 | 108 |
nongranular leukocyte | 2.08e-29 | 115 |
granulocyte monocyte progenitor cell | 2.21e-29 | 67 |
hematopoietic lineage restricted progenitor cell | 1.03e-28 | 120 |
macrophage dendritic cell progenitor | 6.07e-28 | 61 |
monopoietic cell | 3.39e-27 | 59 |
monocyte | 3.39e-27 | 59 |
monoblast | 3.39e-27 | 59 |
promonocyte | 3.39e-27 | 59 |
myeloid lineage restricted progenitor cell | 5.20e-26 | 66 |
defensive cell | 1.01e-25 | 48 |
phagocyte | 1.01e-25 | 48 |
classical monocyte | 1.74e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-25 | 42 |
mesenchymal cell | 2.24e-09 | 354 |
connective tissue cell | 9.31e-09 | 361 |
motile cell | 2.02e-07 | 386 |
granulocyte | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-31 | 98 |
blood island | 1.10e-31 | 98 |
hemolymphoid system | 1.16e-29 | 108 |
bone marrow | 5.83e-25 | 76 |
bone element | 2.12e-24 | 82 |
immune system | 4.75e-24 | 93 |
skeletal element | 2.80e-20 | 90 |
skeletal system | 6.49e-18 | 100 |
connective tissue | 2.28e-09 | 371 |
adult organism | 9.57e-09 | 114 |
lateral plate mesoderm | 9.61e-08 | 203 |
musculoskeletal system | 1.18e-07 | 167 |