FFCP PHASE1:Hg19::chr2:27008888..27008968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1058 | |EntrezGene=1058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1851 | |HGNC=1851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000233505,ENST00000472719_5end | |association_with_transcript=0bp_to_ENST00000233505,ENST00000472719_5end | ||
|cluster_id=chr2:27008888..27008968,+ | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_2_at_CENPA_5end | |description=CAGE_peak_2_at_CENPA_5end | ||
|id=chr2:27008888..27008968,+ | |id=chr2:27008888..27008968,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.99e-24!254;CL:0000548!1.12e-20!679;CL:0000004!1.12e-20!679;CL:0000255!1.12e-20!679;CL:0000012!4.74e-20!682;CL:0000003!3.09e-11!722;CL:0002321!8.25e-11!248;CL:0000220!2.04e-10!246;CL:0000063!2.23e-10!578;CL:0000144!1.65e-07!625;CL:0000333!2.84e-07!41;CL:0000076!5.89e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.99e-24!254;CL:0000548!1.12e-20!679;CL:0000004!1.12e-20!679;CL:0000255!1.12e-20!679;CL:0000012!4.74e-20!682;CL:0000003!3.09e-11!722;CL:0002321!8.25e-11!248;CL:0000220!2.04e-10!246;CL:0000063!2.23e-10!578;CL:0000144!1.65e-07!625;CL:0000333!2.84e-07!41;CL:0000076!5.89e-07!62 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-24,253;CL:0002321,5.85e-11,250;CL:0000333,2.03e-07,41;CL:0000076,9.52e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.32e-49!235;DOID:14566!3.63e-47!239;DOID:0050687!4.06e-26!143;DOID:0050686!4.31e-23!137;DOID:305!4.20e-20!106;DOID:2531!1.26e-17!51;DOID:0060083!1.26e-17!51;DOID:1240!6.76e-14!39;DOID:8692!3.74e-10!31 | |ontology_enrichment_disease=DOID:162!3.32e-49!235;DOID:14566!3.63e-47!239;DOID:0050687!4.06e-26!143;DOID:0050686!4.31e-23!137;DOID:305!4.20e-20!106;DOID:2531!1.26e-17!51;DOID:0060083!1.26e-17!51;DOID:1240!6.76e-14!39;DOID:8692!3.74e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.03e-11;39!DOID:2531;4.50e-11;51!DOID:0060083;4.50e-11;51!DOID:8692;5.66e-10;31!DOID:305;3.37e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.66e-49,235;DOID:14566,2.08e-47,239;DOID:0050687,2.82e-26,143;DOID:0050686,2.93e-23,137;DOID:305,3.45e-20,106;DOID:2531,7.92e-18,51;DOID:0060083,7.92e-18,51;DOID:1240,4.73e-14,39;DOID:8692,2.91e-10,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@CENPA | |short_description=p2@CENPA | ||
}} | }} |
Latest revision as of 15:23, 16 September 2015
Short description: | p2@CENPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CENPA_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000233505, ENST00000472719_5end |
EntrezGene: | CENPA |
HGNC: | 1851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-24 | 253 |
embryonic cell | 5.85e-11 | 250 |
migratory neural crest cell | 2.03e-07 | 41 |
squamous epithelial cell | 9.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.66e-49 | 235 |
disease of cellular proliferation | 2.08e-47 | 239 |
cell type cancer | 2.82e-26 | 143 |
organ system cancer | 2.93e-23 | 137 |
carcinoma | 3.45e-20 | 106 |
hematologic cancer | 7.92e-18 | 51 |
immune system cancer | 7.92e-18 | 51 |
leukemia | 4.73e-14 | 39 |
myeloid leukemia | 2.91e-10 | 31 |