FFCP PHASE1:Hg19::chr9:139926567..139926578,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2529 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4018 | |||
|TSSclassifier=strong | |||
|UniProt=Q11130 | |||
|association_with_transcript=1bp_to_U08112,U11282_5end | |||
|cluster_id=chr9:139926567..139926578,- | |||
|coexpression_cluster_id=C2609 | |||
|description=CAGE_peak_4_at_FUT7_5end | |||
|id=chr9:139926567..139926578,- | |||
|ontology_enrichment_celltype=CL:0000037!1.19e-39!172;CL:0000566!1.19e-39!172;CL:0000988!2.43e-36!182;CL:0002032!9.50e-35!165;CL:0000837!9.50e-35!165;CL:0000738!1.13e-28!140;CL:0000451!1.22e-20!10;CL:0000542!5.88e-18!53;CL:0000051!5.88e-18!53;CL:0000838!6.09e-17!52;CL:0002087!7.44e-17!119;CL:0000763!8.76e-17!112;CL:0000049!8.76e-17!112;CL:0000990!9.15e-17!8;CL:0002031!7.88e-16!124;CL:0000840!1.05e-11!5;CL:0001029!1.05e-11!5;CL:0000134!5.21e-10!358;CL:0000453!6.57e-10!5;CL:0000084!1.04e-09!25;CL:0000827!1.04e-09!25;CL:0002320!1.79e-09!365;CL:0000094!4.08e-09!8;CL:0000219!1.29e-07!390;CL:0000784!1.77e-07!3;CL:0000945!2.80e-07!24;CL:0000826!2.80e-07!24;CL:0000775!2.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.45e-22;10!CL:0000990;1.85e-15;8!CL:0000784;9.13e-14;3!CL:0000775;2.97e-13;3!CL:0000094;4.14e-13;8!CL:0000840;9.34e-11;5!CL:0000236;3.30e-10;13!CL:0000771;1.19e-09;2!CL:0000081;1.94e-09;11!CL:0000945;4.55e-09;24!CL:0000542;2.70e-08;53!CL:0000453;9.57e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.36e-26,168;CL:0000988,3.60e-24,177;CL:0000451,1.58e-22,10;CL:0002032,2.44e-22,161;CL:0000837,2.44e-22,161;CL:0000738,3.22e-16,136;CL:0000990,1.86e-15,8;CL:0000784,1.06e-13,3;CL:0000775,2.87e-13,3;CL:0000094,3.77e-13,8;CL:0000838,8.86e-12,52;CL:0000542,1.69e-11,53;CL:0000051,1.69e-11,53;CL:0000763,2.47e-11,108;CL:0000049,2.47e-11,108;CL:0000840,7.63e-11,5;CL:0001029,7.63e-11,5;CL:0000771,1.06e-09,2;CL:0000236,1.39e-09,14;CL:0000081,1.81e-09,11;CL:0000945,3.69e-09,24;CL:0000826,3.69e-09,24;CL:0000134,7.84e-08,354;CL:0000453,1.01e-07,5;CL:0002320,1.61e-07,361;CL:0002031,2.74e-07,120;CL:0002087,7.98e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!7.01e-15!39;DOID:2531!4.46e-14!51;DOID:0060083!4.46e-14!51;DOID:8692!3.94e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.15e-10;39!DOID:2531;1.46e-08;51!DOID:0060083;1.46e-08;51!DOID:8692;1.64e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.95e-12,39;DOID:2531,2.13e-12,51;DOID:0060083,2.13e-12,51;DOID:8692,6.24e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-10!102;UBERON:0003061!2.76e-10!102;UBERON:0002193!3.42e-10!112;UBERON:0000178!4.29e-09!15;UBERON:0000179!4.29e-09!15;UBERON:0000463!4.29e-09!15;UBERON:0002384!9.52e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.07e-12;15!UBERON:0000179;6.07e-12;15!UBERON:0000463;6.07e-12;15!UBERON:0002390;9.67e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.30e-12,15;UBERON:0000179,5.30e-12,15;UBERON:0000463,5.30e-12,15;UBERON:0002384,4.29e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,1.63841583378639,1.77901850772711,1.28019066769952,1.60158394814405,2.29900975981793,1.32208974556972,0,0,0,0.382273228125229,0,0,2.10707267820062,0,0.393010762749165,0,0,0,0,0,0.111410456885174,1.17842362989935,1.32920336750173,1.89562704635511,0.512365278902701,0.390178042679635,0,0.276350017785848,0,0,0,0,0.566546713487831,0,1.03088233644789,0,0,1.30216690771284,0.950452044448374,0,0.255973222308837,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.39303789839414,1.46253756570752,4.5313218618015,8.00792875092179,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,0.197030760201927,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,1.66762242820452,1.23408681925858,1.29694662238543,0,2.37937552888281,0,0,0,0.371606350251437,0,0,0,0.399158742865633,0.383010740264733,1.48171507906718,0,3.08876895924805,0.912938716132769,2.97691801968744,2.50634477090067,0,4.97823032821469,3.43059502224781,1.27753871307098,1.71752672377882,0.307240764308458,0.894704431569664,1.00109485027145,0.781552381608161,0,0,0,0,0,0,0,0,5.23783906104148,0,0,0,0,0,0,0,8.40499758556474,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.1007533168552,0,0.136203406111576,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.427149650270779,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,1.19578356282027,0.817826971279221,0,0,0,0.39997479170986,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,1.31577485171795,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.0636471582781649,0,0,0,0.673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 | |||
|short_description=p4@FUT7 | |||
}} |
Latest revision as of 15:23, 16 September 2015
Short description: | p4@FUT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FUT7_5end |
Coexpression cluster: | C2609_Dendritic_anaplastic_Neutrophils_hairy_migratory_adult_acute |
Association with transcript: | 1bp_to_U08112, U11282_5end |
EntrezGene: | FUT7 |
HGNC: | 4018 |
UniProt: | Q11130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.36e-26 | 168 |
hematopoietic cell | 3.60e-24 | 177 |
dendritic cell | 1.58e-22 | 10 |
hematopoietic oligopotent progenitor cell | 2.44e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-22 | 161 |
leukocyte | 3.22e-16 | 136 |
conventional dendritic cell | 1.86e-15 | 8 |
plasmacytoid dendritic cell | 1.06e-13 | 3 |
neutrophil | 2.87e-13 | 3 |
granulocyte | 3.77e-13 | 8 |
lymphoid lineage restricted progenitor cell | 8.86e-12 | 52 |
lymphocyte | 1.69e-11 | 53 |
common lymphoid progenitor | 1.69e-11 | 53 |
myeloid cell | 2.47e-11 | 108 |
common myeloid progenitor | 2.47e-11 | 108 |
immature conventional dendritic cell | 7.63e-11 | 5 |
common dendritic progenitor | 7.63e-11 | 5 |
eosinophil | 1.06e-09 | 2 |
B cell | 1.39e-09 | 14 |
blood cell | 1.81e-09 | 11 |
lymphocyte of B lineage | 3.69e-09 | 24 |
pro-B cell | 3.69e-09 | 24 |
mesenchymal cell | 7.84e-08 | 354 |
Langerhans cell | 1.01e-07 | 5 |
connective tissue cell | 1.61e-07 | 361 |
hematopoietic lineage restricted progenitor cell | 2.74e-07 | 120 |
nongranular leukocyte | 7.98e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 5.30e-12 | 15 |
haemolymphatic fluid | 5.30e-12 | 15 |
organism substance | 5.30e-12 | 15 |
connective tissue | 4.29e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.95e-12 | 39 |
hematologic cancer | 2.13e-12 | 51 |
immune system cancer | 2.13e-12 | 51 |
myeloid leukemia | 6.24e-09 | 31 |