FFCP PHASE1:Hg19::chr2:11752360..11752376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=-8bp_to_ENST00000396123,uc002rbp.1_5end | |association_with_transcript=-8bp_to_ENST00000396123,uc002rbp.1_5end | ||
|cluster_id=chr2:11752360..11752376,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_3_at_GREB1_5end | |description=CAGE_peak_3_at_GREB1_5end | ||
|id=chr2:11752360..11752376,+ | |id=chr2:11752360..11752376,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.64e-08!19;CL:0000147!2.58e-07!14 | |ontology_enrichment_celltype=CL:0000077!3.64e-08!19;CL:0000147!2.58e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000147;8.93e-17;14!CL:0000148;2.60e-15;10!CL:0002567;1.38e-10;3!CL:0000710;5.78e-09;20!CL:0002619;6.30e-09;3!CL:0000149;3.67e-07;4!CL:0000244;4.88e-07;4!CL:0000731;4.88e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.30e-17,14;CL:0000148,2.64e-15,10;CL:0000541,2.64e-15,10;CL:0002567,1.37e-10,3;CL:0002619,3.72e-09,3;CL:0000710,6.23e-09,20;CL:0000149,3.35e-07,4;CL:0000244,3.58e-07,4;CL:0000731,3.58e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.05e-08!14 | |ontology_enrichment_disease=DOID:2394!1.05e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.22e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.21e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002020!9.31e-12!34;UBERON:0003528!9.31e-12!34;UBERON:0001893!1.36e-11!34;UBERON:0002791!5.81e-11!33;UBERON:0001869!1.14e-10!32;UBERON:0002780!4.56e-09!41;UBERON:0001890!4.56e-09!41;UBERON:0006240!4.56e-09!41;UBERON:0000955!1.02e-08!69;UBERON:0006238!1.02e-08!69;UBERON:0003080!1.21e-08!42;UBERON:0001049!1.23e-08!57;UBERON:0005068!1.23e-08!57;UBERON:0006241!1.23e-08!57;UBERON:0007135!1.23e-08!57;UBERON:0002619!2.04e-08!22;UBERON:0003075!2.41e-08!86;UBERON:0007284!2.41e-08!86;UBERON:0002616!3.52e-08!59;UBERON:0005743!6.48e-08!86;UBERON:0000956!1.78e-07!25;UBERON:0000203!1.78e-07!25;UBERON:0002346!2.13e-07!90;UBERON:0003056!2.29e-07!61;UBERON:0001950!3.25e-07!20;UBERON:0000073!5.61e-07!94;UBERON:0001016!5.61e-07!94;UBERON:0001017!6.69e-07!82 | |ontology_enrichment_uberon=UBERON:0002020!9.31e-12!34;UBERON:0003528!9.31e-12!34;UBERON:0001893!1.36e-11!34;UBERON:0002791!5.81e-11!33;UBERON:0001869!1.14e-10!32;UBERON:0002780!4.56e-09!41;UBERON:0001890!4.56e-09!41;UBERON:0006240!4.56e-09!41;UBERON:0000955!1.02e-08!69;UBERON:0006238!1.02e-08!69;UBERON:0003080!1.21e-08!42;UBERON:0001049!1.23e-08!57;UBERON:0005068!1.23e-08!57;UBERON:0006241!1.23e-08!57;UBERON:0007135!1.23e-08!57;UBERON:0002619!2.04e-08!22;UBERON:0003075!2.41e-08!86;UBERON:0007284!2.41e-08!86;UBERON:0002616!3.52e-08!59;UBERON:0005743!6.48e-08!86;UBERON:0000956!1.78e-07!25;UBERON:0000203!1.78e-07!25;UBERON:0002346!2.13e-07!90;UBERON:0003056!2.29e-07!61;UBERON:0001950!3.25e-07!20;UBERON:0000073!5.61e-07!94;UBERON:0001016!5.61e-07!94;UBERON:0001017!6.69e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.07e-11;6!UBERON:0001950;4.67e-09;20!UBERON:0002619;3.96e-08;22!UBERON:0000956;5.23e-07;25!UBERON:0000203;5.23e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,2.40e-11,6;UBERON:0001950,3.52e-09,20;UBERON:0002619,3.07e-08,22;UBERON:0000956,4.20e-07,25;UBERON:0000203,4.20e-07,25;UBERON:0002702,7.47e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79132379391939,1.29557466407592,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.594524649154913,0,0.16798212819886,0,0.53735113621709,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,8.57221572944282,12.6056180434232,16.4104426094066,6.84289784090821,12.4421266171021,8.40960561962969,17.1495859578347,0.784917590417525,0,0.4400297149257,1.16344544182,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,1.20575750823834,0,0.599837947092342,2.43247561282381,1.50677127429638,4.21667878966063,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.768834895534206,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.246381468041427,0,0.116210378459959,0,0.601519410909855,0.552485933615378,0,0,0.655622074797121,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,1.53870075069834,0,1.30151357865721,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0,0.537101224341368,0.725083469571143,0.255679882248303,0,0,0,0.255225424989168,0.2023155617111,0,0.62962469366128,0,0.308033580176089,1.06461206063404,0,0,0,0.372158369359667,0,1.14378116354295,0.255897791311334,0,0,0,0.719489830333259,0,0.706874414074119,0.606547444719948,0,0.421258456238981,0,0,0,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,1.06428319221179,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,2.58303223602738,0,1.33029046061003,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,1.9882952955326,0.844016498463076,0.333926115068718,0.494411622680279,0,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0.435753854075961,0,0,1.13942055847001,1.84451123510448,1.07709173291727,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0.365446585430928,0,0.193978032976839,0,0.225980740780532,3.01492234222852,2.38457534043588,0.633107959558787,0,0.240476460754601,0,1.39866726707491,0,0,0,0.288109595976299,0.745515213392595,0,0.135904206073614,0.732219924186332,2.75395187618069,0.288950589901519,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,1.39723980313457,0,0,0,1.90080605734932,0.537862017998534,0.383830394638891,1.42939065274673,0,0,0,2.5926644736038,0,0,0.082092520749339,1.02232813071253,0.453248366080503,0,0,0.646414781807753,1.05786081394152,3.76391043345525,0,0.106787412567695,0,0,0.496166021811951,0,0,2.55336503108073,0,0,0,0,0,1.77213635993397,1.34228891392159,1.8778639605975,0,0.332787154610557,0.310482014706917,0,0.124980407962107,9.55389440512381,13.4168706766135,0.941063278792687,0,0,0.597019211547496,0.467426619694449,1.66441758450784,0,0,1.77962244319307,1.60188047877847,0.756154618816195,0.15543720058278,0.295710299979268,0.318593534327405,0.899606224327209,0.465788870628778,0.414706207840855,2.39257543102195,0.521745061811734,0.601030435988874,1.90402606084398,0.813741466409323,0.181848659202559,0.214821114084977,0.928067519756987,0.398095888698616,0,0.343395705182793,0,0,0.57785949122191,0.214441591374926,0,0.906823702049089,0.463044948647668,0.244736704506468,0.358177682162975,0.308801447160972,1.97355644620836,7.06756583783524,0.192914038270915,1.01365464391844,1.28120759293973,4.83602478423678,1.21543982470953,0.967809053062115,0.194860308839388,0,1.63565394255844,2.9484886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| ||
|short_description=p3@GREB1 | |short_description=p3@GREB1 | ||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p3@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GREB1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -8bp_to_ENST00000396123, uc002rbp.1_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.30e-17 | 14 |
melanocyte | 2.64e-15 | 10 |
melanoblast | 2.64e-15 | 10 |
light melanocyte | 1.37e-10 | 3 |
adult endothelial progenitor cell | 3.72e-09 | 3 |
neurecto-epithelial cell | 6.23e-09 | 20 |
visual pigment cell | 3.35e-07 | 4 |
transitional epithelial cell | 3.58e-07 | 4 |
urothelial cell | 3.58e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gyrus | 2.40e-11 | 6 |
neocortex | 3.52e-09 | 20 |
regional part of cerebral cortex | 3.07e-08 | 22 |
cerebral cortex | 4.20e-07 | 25 |
pallium | 4.20e-07 | 25 |
middle frontal gyrus | 7.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.21e-07 | 2 |