FFCP PHASE1:Hg19::chr7:138440637..138440651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50617 | |EntrezGene=50617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=866 | |HGNC=866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_ENST00000478480_5end | |||
|cluster_id=chr7:138440637..138440651,- | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_6_at_ATP6V0A4_5end | |||
|id=chr7:138440637..138440651,- | |||
|ontology_enrichment_celltype=CL:0000148!1.62e-19!10;CL:0000541!1.62e-19!10;CL:0000147!9.03e-14!14;CL:0000710!1.88e-09!20;CL:0000667!8.63e-09!6;CL:0000058!8.63e-09!6;CL:0000138!8.63e-09!6;CL:0002567!2.67e-08!3;CL:0002566!5.13e-07!1;CL:0000075!7.74e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.55e-35;10!CL:0000147;2.10e-25;14!CL:0002566;2.34e-23;1!CL:0000710;6.06e-18;20!CL:0000138;7.23e-16;6!CL:0000075;2.06e-13;27!CL:0000153;6.54e-11;9!CL:0000447;6.54e-11;9!CL:0002077;1.19e-10;34!CL:0002567;1.08e-08;3!CL:0000327;6.59e-07;15!CL:0000149;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.78e-35,10;CL:0000541,2.78e-35,10;CL:0000147,2.24e-25,14;CL:0002566,2.62e-23,1;CL:0000710,6.33e-18,20;CL:0000058,7.23e-16,6;CL:0000138,7.23e-16,6;CL:0000075,2.13e-13,27;CL:0000153,6.54e-11,9;CL:0000447,6.54e-11,9;CL:0002077,1.00e-10,34;CL:0002567,1.04e-08,3;CL:0000333,1.48e-08,41;CL:0000327,6.59e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!2.04e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.75e-45;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.26e-45,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-31!57;UBERON:0005068!1.13e-31!57;UBERON:0006241!1.13e-31!57;UBERON:0007135!1.13e-31!57;UBERON:0001017!2.48e-25!82;UBERON:0000955!5.00e-25!69;UBERON:0006238!5.00e-25!69;UBERON:0002616!3.04e-24!59;UBERON:0005743!5.84e-24!86;UBERON:0002780!1.17e-21!41;UBERON:0001890!1.17e-21!41;UBERON:0006240!1.17e-21!41;UBERON:0000073!2.74e-21!94;UBERON:0001016!2.74e-21!94;UBERON:0003080!4.39e-21!42;UBERON:0003075!1.21e-19!86;UBERON:0007284!1.21e-19!86;UBERON:0002346!1.38e-18!90;UBERON:0007023!4.34e-17!115;UBERON:0001893!3.33e-16!34;UBERON:0001869!3.15e-14!32;UBERON:0002791!8.43e-14!33;UBERON:0003056!1.01e-13!61;UBERON:0002020!2.64e-13!34;UBERON:0003528!2.64e-13!34;UBERON:0000153!6.11e-13!129;UBERON:0007811!6.11e-13!129;UBERON:0004121!1.93e-12!169;UBERON:0000033!2.49e-12!123;UBERON:0000924!4.84e-12!173;UBERON:0006601!4.84e-12!173;UBERON:0003076!6.72e-12!15;UBERON:0003057!6.72e-12!15;UBERON:0001950!1.33e-11!20;UBERON:0001897!1.46e-11!2;UBERON:0002619!1.63e-10!22;UBERON:0000956!3.39e-09!25;UBERON:0000203!3.39e-09!25;UBERON:0002240!4.40e-08!3;UBERON:0000988!7.72e-08!3;UBERON:0000025!2.76e-07!194;UBERON:0001894!2.82e-07!7;UBERON:0006222!2.82e-07!7;UBERON:0004733!5.90e-07!12;UBERON:0002028!5.90e-07!12;UBERON:0007277!5.90e-07!12;UBERON:0002022!8.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0001137;1.35e-08;3!UBERON:0001003;7.75e-07;15!UBERON:0007376;7.75e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.40e-08,3;UBERON:0005174,1.40e-08,3;UBERON:0001137,1.40e-08,3;UBERON:0001003,7.41e-07,15;UBERON:0007376,7.41e-07,15;UBERON:0007383,7.41e-07,15 | |||
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|short_description=p6@ATP6V0A4 | |||
}} | }} |
Latest revision as of 15:15, 16 September 2015
Short description: | p6@ATP6V0A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATP6V0A4_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | 84bp_to_ENST00000478480_5end |
EntrezGene: | ATP6V0A4 |
HGNC: | 866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.78e-35 | 10 |
melanoblast | 2.78e-35 | 10 |
pigment cell | 2.24e-25 | 14 |
dark melanocyte | 2.62e-23 | 1 |
neurecto-epithelial cell | 6.33e-18 | 20 |
chondroblast | 7.23e-16 | 6 |
chondrocyte | 7.23e-16 | 6 |
columnar/cuboidal epithelial cell | 2.13e-13 | 27 |
GAG secreting cell | 6.54e-11 | 9 |
carbohydrate secreting cell | 6.54e-11 | 9 |
ecto-epithelial cell | 1.00e-10 | 34 |
light melanocyte | 1.04e-08 | 3 |
migratory neural crest cell | 1.48e-08 | 41 |
extracellular matrix secreting cell | 6.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.40e-08 | 3 |
dorsal region element | 1.40e-08 | 3 |
dorsum | 1.40e-08 | 3 |
skin epidermis | 7.41e-07 | 15 |
outer epithelium | 7.41e-07 | 15 |
enveloping layer of ectoderm | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.26e-45 | 2 |