FFCP PHASE1:Hg19::chr10:118898132..118898140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11023 | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |HGNC=12660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |UniProt=Q5SQQ9 | ||
|association_with_transcript=-320bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |||
|cluster_id=chr10:118898132..118898140,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_9_at_VAX1_5end | |||
|id=chr10:118898132..118898140,- | |||
|ontology_enrichment_celltype=CL:0002605!6.79e-11!3;CL:0000128!4.47e-10!7;CL:0000126!4.47e-10!7;CL:0000127!4.47e-10!7;CL:0002453!4.47e-10!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!7.56e-09!1;DOID:4549!7.56e-09!1;DOID:5861!7.56e-09!1;DOID:6496!7.56e-09!1;DOID:171!2.36e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0001893!9.40e-27!34;UBERON:0002780!5.81e-26!41;UBERON:0001890!5.81e-26!41;UBERON:0006240!5.81e-26!41;UBERON:0003080!2.65e-25!42;UBERON:0001869!8.14e-24!32;UBERON:0002791!4.74e-23!33;UBERON:0001049!3.26e-21!57;UBERON:0005068!3.26e-21!57;UBERON:0006241!3.26e-21!57;UBERON:0007135!3.26e-21!57;UBERON:0001017!4.62e-21!82;UBERON:0000956!1.68e-20!25;UBERON:0000203!1.68e-20!25;UBERON:0005743!5.88e-20!86;UBERON:0000955!1.53e-19!69;UBERON:0006238!1.53e-19!69;UBERON:0002346!1.99e-19!90;UBERON:0002020!2.35e-18!34;UBERON:0003528!2.35e-18!34;UBERON:0000073!8.35e-18!94;UBERON:0001016!8.35e-18!94;UBERON:0002616!1.84e-17!59;UBERON:0003056!8.05e-17!61;UBERON:0001950!2.23e-15!20;UBERON:0002619!5.64e-14!22;UBERON:0003075!2.86e-13!86;UBERON:0007284!2.86e-13!86;UBERON:0000924!1.83e-12!173;UBERON:0006601!1.83e-12!173;UBERON:0000200!4.67e-11!6;UBERON:0000033!7.08e-10!123;UBERON:0007023!2.54e-09!115;UBERON:0000153!2.70e-09!129;UBERON:0007811!2.70e-09!129;UBERON:0004121!1.25e-08!169;UBERON:0007190!1.27e-08!1;UBERON:0002336!1.37e-08!1;UBERON:0001018!1.37e-08!1;UBERON:0002473!1.37e-08!1;UBERON:0005340!1.37e-08!1;UBERON:0002316!1.37e-08!1;UBERON:0003544!1.37e-08!1;UBERON:0001020!1.37e-08!1;UBERON:0005970!1.37e-08!1;UBERON:0002437!1.37e-08!1;UBERON:0000025!2.40e-08!194;UBERON:0001871!2.56e-08!7;UBERON:0002902!3.53e-08!1;UBERON:0009899!3.53e-08!1;UBERON:0002581!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.94e-147;4!UBERON:0000923;6.94e-147;4!UBERON:0010316;6.94e-147;4!UBERON:0005291;6.94e-147;4!UBERON:0002050;7.76e-118;5!UBERON:0005423;7.76e-118;5!UBERON:0000922;2.49e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.10e-08,86 | |||
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|short_description=p9@VAX1 | |||
}} | }} |
Latest revision as of 15:12, 16 September 2015
Short description: | p9@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VAX1_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -320bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.10e-08 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |