FFCP PHASE1:Hg19::chr7:138310788..138310802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=136306 | |EntrezGene=136306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27034 | |HGNC=27034 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000478865_5end | |association_with_transcript=36bp_to_ENST00000478865_5end | ||
|cluster_id=chr7:138310788..138310802,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_SVOPL_5end | |description=CAGE_peak_2_at_SVOPL_5end | ||
|id=chr7:138310788..138310802,- | |id=chr7:138310788..138310802,- | ||
|ontology_enrichment_celltype=CL:0002274!1.17e-18!5;CL:0000457!1.17e-18!5;CL:0002191!1.17e-18!5;CL:0000097!1.17e-18!5;CL:0000831!1.17e-18!5;CL:0002028!1.17e-18!5;CL:0000163!3.58e-10!9;CL:0000037!2.77e-09!172;CL:0000566!2.77e-09!172;CL:0000988!2.11e-08!182;CL:0000763!2.65e-08!112;CL:0000049!2.65e-08!112;CL:0002032!3.09e-08!165;CL:0000837!3.09e-08!165;CL:0000764!1.72e-07!2;CL:0000765!1.72e-07!2;CL:0000050!1.72e-07!2;CL:0000038!1.72e-07!2;CL:0000558!1.72e-07!2;CL:0000547!1.72e-07!2;CL:0000549!1.72e-07!2;CL:0000550!1.72e-07!2;CL:0000552!1.72e-07!2 | |ontology_enrichment_celltype=CL:0002274!1.17e-18!5;CL:0000457!1.17e-18!5;CL:0002191!1.17e-18!5;CL:0000097!1.17e-18!5;CL:0000831!1.17e-18!5;CL:0002028!1.17e-18!5;CL:0000163!3.58e-10!9;CL:0000037!2.77e-09!172;CL:0000566!2.77e-09!172;CL:0000988!2.11e-08!182;CL:0000763!2.65e-08!112;CL:0000049!2.65e-08!112;CL:0002032!3.09e-08!165;CL:0000837!3.09e-08!165;CL:0000764!1.72e-07!2;CL:0000765!1.72e-07!2;CL:0000050!1.72e-07!2;CL:0000038!1.72e-07!2;CL:0000558!1.72e-07!2;CL:0000547!1.72e-07!2;CL:0000549!1.72e-07!2;CL:0000550!1.72e-07!2;CL:0000552!1.72e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.13e-45;5!CL:0000163;5.19e-25;9!CL:0000037;7.55e-10;1!CL:0001024;7.55e-10;1!CL:0000763;2.21e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.90e-45,5;CL:0002028,4.90e-45,5;CL:0000163,5.07e-25,9;CL:0000763,1.58e-15,108;CL:0000049,1.58e-15,108;CL:0000037,9.30e-14,168;CL:0000988,6.59e-13,177;CL:0002032,9.85e-13,161;CL:0000837,9.85e-13,161;CL:0001024,6.33e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!6.86e-19!39;DOID:8692!3.77e-16!31;DOID:2531!1.71e-13!51;DOID:0060083!1.71e-13!51;DOID:1036!1.31e-10!8 | |ontology_enrichment_disease=DOID:1240!6.86e-19!39;DOID:8692!3.77e-16!31;DOID:2531!1.71e-13!51;DOID:0060083!1.71e-13!51;DOID:1036!1.31e-10!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-25;31!DOID:1240;9.21e-22;39!DOID:2531;6.08e-17;51!DOID:0060083;6.08e-17;51!DOID:1036;2.89e-10;8!DOID:9119;3.40e-10;1!DOID:8552;3.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.80e-30,39;DOID:8692,2.60e-26,31;DOID:2531,2.30e-22,51;DOID:0060083,2.30e-22,51;DOID:9119,2.84e-10,1;DOID:1036,2.89e-10,8;DOID:8552,4.06e-10,1;DOID:0050686,5.07e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.56e-07!4;UBERON:0005058!1.56e-07!4;UBERON:0009113!1.56e-07!4;UBERON:0003295!1.56e-07!4;UBERON:0005562!1.56e-07!4;UBERON:0004177!3.26e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!1.56e-07!4;UBERON:0005058!1.56e-07!4;UBERON:0009113!1.56e-07!4;UBERON:0003295!1.56e-07!4;UBERON:0005562!1.56e-07!4;UBERON:0004177!3.26e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SVOPL | |short_description=p2@SVOPL | ||
}} | }} |
Latest revision as of 15:11, 16 September 2015
Short description: | p2@SVOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SVOPL_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 36bp_to_ENST00000478865_5end |
EntrezGene: | SVOPL |
HGNC: | 27034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.90e-45 | 5 |
basophil mast progenitor cell | 4.90e-45 | 5 |
endocrine cell | 5.07e-25 | 9 |
myeloid cell | 1.58e-15 | 108 |
common myeloid progenitor | 1.58e-15 | 108 |
hematopoietic stem cell | 9.30e-14 | 168 |
hematopoietic cell | 6.59e-13 | 177 |
hematopoietic oligopotent progenitor cell | 9.85e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.85e-13 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.80e-30 | 39 |
myeloid leukemia | 2.60e-26 | 31 |
hematologic cancer | 2.30e-22 | 51 |
immune system cancer | 2.30e-22 | 51 |
acute myeloid leukemia | 2.84e-10 | 1 |
chronic leukemia | 2.89e-10 | 8 |
chronic myeloid leukemia | 4.06e-10 | 1 |
organ system cancer | 5.07e-07 | 137 |