FFCP PHASE1:Hg19::chr2:11680148..11680159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=68bp_to_NM_148903,uc002rbl.2_5end | |association_with_transcript=68bp_to_NM_148903,uc002rbl.2_5end | ||
|cluster_id=chr2:11680148..11680159,+ | |||
|coexpression_cluster_id=C1879 | |||
|description=CAGE_peak_10_at_GREB1_5end | |description=CAGE_peak_10_at_GREB1_5end | ||
|id=chr2:11680148..11680159,+ | |id=chr2:11680148..11680159,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.29e-08!3 | |ontology_enrichment_celltype=CL:0002541!1.29e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.25e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.52e-12;10!UBERON:0005564;1.52e-12;10!UBERON:0004161;2.47e-11;11!UBERON:0009497;1.12e-09;13!UBERON:0007297;5.94e-08;2 | |||
|ontology_enrichment_disease=DOID:5093!1.70e-14!4;DOID:1612!1.70e-14!4 | |ontology_enrichment_disease=DOID:5093!1.70e-14!4;DOID:1612!1.70e-14!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.00e-31;4!DOID:1612;4.00e-31;4!DOID:7;8.81e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.21e-31,4;DOID:1612,4.21e-31,4;DOID:7,5.52e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0002360!2.72e-12!2;UBERON:0000094!2.72e-12!2;UBERON:0007645!2.72e-12!2;UBERON:0007023!9.31e-11!115;UBERON:0001443!4.72e-09!11;UBERON:0003135!1.05e-08!11;UBERON:0000476!1.29e-08!3;UBERON:0000920!1.29e-08!3;UBERON:0003124!6.67e-08!7;UBERON:0006834!1.65e-07!1;UBERON:0001301!2.23e-07!1;UBERON:0002426!2.84e-07!1;UBERON:0003831!2.84e-07!1;UBERON:0003898!2.84e-07!1;UBERON:0004830!2.84e-07!1;UBERON:0001774!2.84e-07!1;UBERON:0003830!2.84e-07!1;UBERON:0005175!2.84e-07!1;UBERON:0003897!2.84e-07!1;UBERON:0001103!2.84e-07!1;UBERON:0010084!2.84e-07!1;UBERON:0000473!4.56e-07!8;UBERON:0003112!5.78e-07!1;UBERON:0000032!5.78e-07!1;UBERON:0005253!5.78e-07!1;UBERON:0003128!5.78e-07!1;UBERON:0002241!5.78e-07!1;UBERON:0001703!5.78e-07!1;UBERON:0004761!5.78e-07!1;UBERON:0009617!5.78e-07!1;UBERON:0002363!6.88e-07!1;UBERON:0007647!6.88e-07!1;UBERON:0010115!6.88e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;7.78e-20;11!UBERON:0006834;6.22e-15;1!UBERON:0005795;7.63e-15;1!UBERON:0001301;1.31e-14;1!UBERON:0002426;2.25e-14;1!UBERON:0003831;2.25e-14;1!UBERON:0003898;2.25e-14;1!UBERON:0004830;2.25e-14;1!UBERON:0003830;2.25e-14;1!UBERON:0005175;2.25e-14;1!UBERON:0001774;2.25e-14;1!UBERON:0001103;2.25e-14;1!UBERON:0000310;7.44e-13;10!UBERON:0003135;1.99e-11;11!UBERON:0005090;7.78e-08;2!UBERON:0001630;7.78e-08;2!UBERON:0003133;1.46e-07;44!UBERON:0000473;1.54e-07;8!UBERON:0002107;8.72e-07;19!UBERON:0006925;8.72e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,7.78e-20,11;UBERON:0006834,6.22e-15,1;UBERON:0001301,1.23e-14,1;UBERON:0002426,2.11e-14,1;UBERON:0003831,2.11e-14,1;UBERON:0003898,2.11e-14,1;UBERON:0004830,2.11e-14,1;UBERON:0003830,2.11e-14,1;UBERON:0005175,2.11e-14,1;UBERON:0001774,2.11e-14,1;UBERON:0001103,2.11e-14,1;UBERON:0010084,2.11e-14,1;UBERON:0000310,7.59e-13,10;UBERON:0003135,1.96e-11,11;UBERON:0003133,1.13e-09,48;UBERON:0005090,7.52e-08,2;UBERON:0001630,7.52e-08,2;UBERON:0005156,8.32e-08,59;UBERON:0000990,8.32e-08,59;UBERON:0000473,1.54e-07,8;UBERON:0009569,8.44e-07,112;UBERON:0002107,9.54e-07,19;UBERON:0006925,9.54e-07,19;UBERON:0008836,9.54e-07,19 | |||
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|short_description=p10@GREB1 | |short_description=p10@GREB1 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p10@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GREB1_5end |
Coexpression cluster: | C1879_ovary_MCF7_breast_hepatocellular_uterus_epididymis_testis |
Association with transcript: | 68bp_to_NM_148903, uc002rbl.2_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.25e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
chest | 7.78e-20 | 11 |
uterus or analog | 6.22e-15 | 1 |
epididymis | 1.23e-14 | 1 |
chest muscle | 2.11e-14 | 1 |
respiratory system muscle | 2.11e-14 | 1 |
skeletal muscle of trunk | 2.11e-14 | 1 |
respiratory system skeletal muscle | 2.11e-14 | 1 |
thoracic segment muscle | 2.11e-14 | 1 |
chest organ | 2.11e-14 | 1 |
muscle of trunk | 2.11e-14 | 1 |
diaphragm | 2.11e-14 | 1 |
future diaphragm | 2.11e-14 | 1 |
breast | 7.59e-13 | 10 |
male reproductive organ | 1.96e-11 | 11 |
reproductive organ | 1.13e-09 | 48 |
muscle structure | 7.52e-08 | 2 |
muscle organ | 7.52e-08 | 2 |
reproductive structure | 8.32e-08 | 59 |
reproductive system | 8.32e-08 | 59 |
testis | 1.54e-07 | 8 |
subdivision of trunk | 8.44e-07 | 112 |
liver | 9.54e-07 | 19 |
digestive gland | 9.54e-07 | 19 |
liver bud | 9.54e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.21e-31 | 4 |
breast cancer | 4.21e-31 | 4 |
disease of anatomical entity | 5.52e-12 | 39 |