FFCP PHASE1:Hg19::chr14:93118644..93118656,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:93118644..93118656,+ to FFCP PHASE1:Hg19::chr14:93118644..93118656,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79890 | |EntrezGene=79890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |HGNC=18751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENST00000556418_5end | |||
|cluster_id=chr14:93118644..93118656,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_12_at_RIN3_5end | |||
|id=chr14:93118644..93118656,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.25e-64!76;CL:0000738!5.19e-56!140;CL:0000557!3.91e-52!71;CL:0000839!1.95e-51!70;CL:0000763!7.90e-50!112;CL:0000049!7.90e-50!112;CL:0002057!3.54e-49!42;CL:0000037!1.18e-48!172;CL:0000566!1.18e-48!172;CL:0002194!6.01e-48!63;CL:0000576!6.01e-48!63;CL:0000040!6.01e-48!63;CL:0000559!6.01e-48!63;CL:0002009!1.44e-47!65;CL:0002032!2.58e-46!165;CL:0000837!2.58e-46!165;CL:0000860!9.81e-45!45;CL:0000988!4.22e-44!182;CL:0002031!7.13e-43!124;CL:0002087!1.73e-41!119;CL:0002393!1.04e-11!9;CL:0002397!1.04e-11!9;CL:0000094!1.57e-11!8;CL:0000134!1.55e-10!358;CL:0002320!8.29e-10!365;CL:0000081!9.83e-08!11;CL:0000219!2.42e-07!390;CL:0002274!5.61e-07!5;CL:0000457!5.61e-07!5;CL:0002191!5.61e-07!5;CL:0000097!5.61e-07!5;CL:0000831!5.61e-07!5;CL:0002028!5.61e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.39e-61;39!CL:0000234;2.39e-61;39!CL:0000860;4.55e-61;33!CL:0002057;4.55e-61;33!CL:0000766;5.25e-56;69!CL:0000576;2.01e-55;48!CL:0000763;5.40e-24;100!CL:0000094;1.13e-22;8!CL:0002393;3.17e-16;6!CL:0002397;3.17e-16;6!CL:0000081;4.80e-16;11!CL:0000738;7.24e-16;136!CL:0002087;4.57e-15;104!CL:0000097;3.91e-13;5!CL:0000235;3.24e-11;6!CL:0000775;7.11e-10;3!CL:0000767;5.68e-09;3!CL:0000226;7.65e-09;3!CL:0000842;7.65e-09;3!CL:0000875;1.17e-08;3!CL:0002396;1.17e-08;3!CL:0000988;1.44e-08;177!CL:0000771;3.01e-07;2!CL:0000163;3.90e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.78e-119,72;CL:0000473,1.64e-100,48;CL:0000234,1.64e-100,48;CL:0000839,5.13e-94,66;CL:0000557,1.97e-92,67;CL:0000860,1.97e-90,42;CL:0002057,1.97e-90,42;CL:0002194,1.77e-85,59;CL:0000576,1.77e-85,59;CL:0000040,1.77e-85,59;CL:0000559,1.77e-85,59;CL:0002009,2.61e-82,61;CL:0000763,7.23e-75,108;CL:0000049,7.23e-75,108;CL:0000738,3.26e-68,136;CL:0000037,2.31e-52,168;CL:0002031,4.15e-50,120;CL:0002032,3.93e-49,161;CL:0000837,3.93e-49,161;CL:0000988,6.25e-49,177;CL:0002087,1.74e-48,115;CL:0002393,3.55e-23,9;CL:0002397,3.55e-23,9;CL:0000094,8.57e-23,8;CL:0000134,7.99e-17,354;CL:0002320,3.35e-16,361;CL:0000081,3.95e-16,11;CL:0000219,5.14e-14,386;CL:0000097,4.18e-13,5;CL:0002028,4.18e-13,5;CL:0000034,7.98e-12,441;CL:0000048,2.36e-11,427;CL:0000235,4.26e-11,6;CL:0000723,5.48e-11,433;CL:0000775,6.82e-10,3;CL:0000767,4.58e-09,3;CL:0000226,7.07e-09,3;CL:0000842,7.07e-09,3;CL:0000875,1.31e-08,3;CL:0002396,1.31e-08,3;CL:0000771,2.97e-07,2;CL:0000163,4.04e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-64;42!CL:0000049;7.98e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-55!102;UBERON:0003061!4.65e-55!102;UBERON:0002193!1.25e-50!112;UBERON:0002371!9.72e-44!80;UBERON:0001474!9.87e-41!86;UBERON:0002405!3.32e-32!115;UBERON:0004765!2.16e-31!101;UBERON:0001434!2.16e-31!101;UBERON:0003081!4.90e-17!216;UBERON:0002204!1.55e-13!167;UBERON:0007023!5.89e-10!115;UBERON:0000178!8.20e-10!15;UBERON:0000179!8.20e-10!15;UBERON:0000463!8.20e-10!15;UBERON:0002384!1.31e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-12;15!UBERON:0000179;2.25e-12;15!UBERON:0000463;2.25e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.98e-88,98;UBERON:0003061,8.98e-88,98;UBERON:0002193,3.69e-81,108;UBERON:0002371,4.96e-80,76;UBERON:0001474,2.94e-73,82;UBERON:0002405,1.86e-68,93;UBERON:0004765,1.28e-65,90;UBERON:0001434,8.99e-58,100;UBERON:0003081,2.58e-36,203;UBERON:0002204,2.33e-29,167;UBERON:0000926,5.28e-19,315;UBERON:0004120,5.28e-19,315;UBERON:0006603,5.28e-19,315;UBERON:0002384,2.36e-15,371;UBERON:0000178,3.84e-12,15;UBERON:0000179,3.84e-12,15;UBERON:0000463,3.84e-12,15 | |||
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| ||
|short_description=p12@RIN3 | |||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p12@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RIN3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -189bp_to_ENST00000556418_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.98e-88 | 98 |
blood island | 8.98e-88 | 98 |
hemolymphoid system | 3.69e-81 | 108 |
bone marrow | 4.96e-80 | 76 |
bone element | 2.94e-73 | 82 |
immune system | 1.86e-68 | 93 |
skeletal element | 1.28e-65 | 90 |
skeletal system | 8.99e-58 | 100 |
lateral plate mesoderm | 2.58e-36 | 203 |
musculoskeletal system | 2.33e-29 | 167 |
mesoderm | 5.28e-19 | 315 |
mesoderm-derived structure | 5.28e-19 | 315 |
presumptive mesoderm | 5.28e-19 | 315 |
connective tissue | 2.36e-15 | 371 |
blood | 3.84e-12 | 15 |
haemolymphatic fluid | 3.84e-12 | 15 |
organism substance | 3.84e-12 | 15 |