FFCP PHASE1:Hg19::chr2:11679963..11679986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000263834_5end | |association_with_transcript=0bp_to_ENST00000263834_5end | ||
|cluster_id=chr2:11679963..11679986,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_8_at_GREB1_5end | |description=CAGE_peak_8_at_GREB1_5end | ||
|id=chr2:11679963..11679986,+ | |id=chr2:11679963..11679986,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.70e-26;2!UBERON:0005754;1.42e-13;1!UBERON:0009117;7.40e-12;10!UBERON:0005564;7.40e-12;10 | |||
|ontology_enrichment_disease=DOID:5093!4.01e-11!4;DOID:1612!4.01e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.25e-29;4!DOID:1612;2.25e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.25e-29,4;DOID:1612,2.25e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-20!115;UBERON:0006947!2.76e-14!3;UBERON:0004054!2.76e-14!3;UBERON:0003135!3.02e-14!11;UBERON:0005904!7.99e-11!4;UBERON:0003101!4.70e-09!22;UBERON:0000079!4.70e-09!22;UBERON:0003133!5.51e-09!48;UBERON:0005156!2.70e-08!59;UBERON:0000990!2.70e-08!59;UBERON:0004175!8.77e-08!25;UBERON:0000310!1.37e-07!10;UBERON:0001443!6.78e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.58e-37;3!UBERON:0004054;1.58e-37;3!UBERON:0005904;2.40e-28;4!UBERON:0003135;4.55e-28;11!UBERON:0000310;1.03e-20;10!UBERON:0001443;7.35e-19;11!UBERON:0004175;1.07e-14;21!UBERON:0000473;1.54e-14;8!UBERON:0003101;4.66e-14;22!UBERON:0000079;4.66e-14;22!UBERON:0001301;5.15e-14;1!UBERON:0006834;6.24e-14;1!UBERON:0005795;1.42e-13;1!UBERON:0001000;1.42e-13;1!UBERON:0000998;1.42e-13;1!UBERON:0006868;1.42e-13;1!UBERON:0005352;1.42e-13;1!UBERON:0000058;9.76e-12;10!UBERON:0003133;4.58e-11;44!UBERON:0000991;9.75e-10;21!UBERON:0005156;6.84e-07;59!UBERON:0000990;6.84e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.54e-38,3;UBERON:0004054,9.54e-38,3;UBERON:0005904,1.65e-28,4;UBERON:0003135,3.63e-28,11;UBERON:0000310,1.03e-20,10;UBERON:0001443,7.35e-19,11;UBERON:0003133,8.63e-16,48;UBERON:0000473,1.47e-14,8;UBERON:0003101,4.17e-14,22;UBERON:0000079,4.17e-14,22;UBERON:0001301,5.15e-14,1;UBERON:0006834,5.85e-14,1;UBERON:0001000,9.73e-14,1;UBERON:0005352,9.73e-14,1;UBERON:0000998,1.25e-13,1;UBERON:0006868,1.25e-13,1;UBERON:0005156,1.06e-12,59;UBERON:0000990,1.06e-12,59;UBERON:0004175,2.07e-12,25;UBERON:0000991,9.64e-10,21;UBERON:0009196,9.64e-10,21;UBERON:0009117,9.64e-10,21;UBERON:0005564,9.64e-10,21;UBERON:0004176,2.61e-09,22;UBERON:0007023,7.76e-08,114 | |||
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| ||
|short_description=p8@GREB1 | |short_description=p8@GREB1 | ||
}} | }} |
Latest revision as of 15:05, 16 September 2015
Short description: | p8@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GREB1_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000263834_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.54e-38 | 3 |
internal male genitalia | 9.54e-38 | 3 |
duct of male reproductive system | 1.65e-28 | 4 |
male reproductive organ | 3.63e-28 | 11 |
breast | 1.03e-20 | 10 |
chest | 7.35e-19 | 11 |
reproductive organ | 8.63e-16 | 48 |
testis | 1.47e-14 | 8 |
male organism | 4.17e-14 | 22 |
male reproductive system | 4.17e-14 | 22 |
epididymis | 5.15e-14 | 1 |
uterus or analog | 5.85e-14 | 1 |
vas deferens | 9.73e-14 | 1 |
spermatic cord | 9.73e-14 | 1 |
seminal vesicle | 1.25e-13 | 1 |
seminal fluid secreting gland | 1.25e-13 | 1 |
reproductive structure | 1.06e-12 | 59 |
reproductive system | 1.06e-12 | 59 |
internal genitalia | 2.07e-12 | 25 |
gonad | 9.64e-10 | 21 |
indifferent external genitalia | 9.64e-10 | 21 |
indifferent gonad | 9.64e-10 | 21 |
gonad primordium | 9.64e-10 | 21 |
external genitalia | 2.61e-09 | 22 |
adult organism | 7.76e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.25e-29 | 4 |
breast cancer | 2.25e-29 | 4 |