FFCP PHASE1:Hg19::chr2:11679852..11679866,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-102bp_to_ENST00000263834_5end | |association_with_transcript=-102bp_to_ENST00000263834_5end | ||
|cluster_id=chr2:11679852..11679866,+ | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_18_at_GREB1_5end | |description=CAGE_peak_18_at_GREB1_5end | ||
|id=chr2:11679852..11679866,+ | |id=chr2:11679852..11679866,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.21e-15;2!UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease=DOID:5093!3.35e-18!4;DOID:1612!3.35e-18!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.98e-64;4!DOID:1612;4.98e-64;4!DOID:7;2.76e-15;39!DOID:299;5.84e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.02e-64,4;DOID:1612,4.02e-64,4;DOID:7,1.71e-18,39;DOID:299,5.65e-11,25;DOID:305,5.34e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.00e-17!11;UBERON:0007023!1.98e-13!115;UBERON:0000310!1.13e-12!10;UBERON:0003101!7.56e-12!22;UBERON:0000079!7.56e-12!22;UBERON:0001443!1.55e-11!11;UBERON:0003133!3.08e-11!48;UBERON:0006947!4.21e-11!3;UBERON:0004054!4.21e-11!3;UBERON:0005156!5.23e-11!59;UBERON:0000990!5.23e-11!59;UBERON:0002107!9.76e-10!19;UBERON:0006925!9.76e-10!19;UBERON:0008836!9.76e-10!19;UBERON:0001301!3.87e-09!1;UBERON:0006122!4.52e-09!1;UBERON:0000989!7.75e-09!1;UBERON:0008811!7.75e-09!1;UBERON:0006258!7.75e-09!1;UBERON:0005876!7.75e-09!1;UBERON:0004874!7.75e-09!1;UBERON:0001000!9.02e-09!1;UBERON:0005352!9.02e-09!1;UBERON:0006834!9.74e-09!1;UBERON:0005904!1.53e-08!4;UBERON:0008835!2.22e-08!22;UBERON:0003894!2.22e-08!22;UBERON:0009854!5.25e-08!23;UBERON:0007499!2.39e-07!25;UBERON:0009497!2.39e-07!25;UBERON:0000015!2.39e-07!25;UBERON:0002423!2.39e-07!25;UBERON:0006235!2.39e-07!25;UBERON:0004161!2.39e-07!25;UBERON:0004175!2.78e-07!25;UBERON:0002368!3.08e-07!35;UBERON:0005057!4.67e-07!26;UBERON:0009856!4.67e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.67e-45;10!UBERON:0001443;1.93e-41;11!UBERON:0001301;2.73e-29;1!UBERON:0006947;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0000915;1.66e-08;52!UBERON:0005904;2.35e-08;4!UBERON:0009569;2.60e-07;110!UBERON:0002107;6.19e-07;19!UBERON:0006925;6.19e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.57e-45,10;UBERON:0001443,1.83e-41,11;UBERON:0001301,1.78e-29,1;UBERON:0009569,1.36e-12,112;UBERON:0006947,8.99e-11,3;UBERON:0004054,8.99e-11,3;UBERON:0000915,3.16e-09,52;UBERON:0005904,2.11e-08,4;UBERON:0002100,3.86e-07,199;UBERON:0002107,6.57e-07,19;UBERON:0006925,6.57e-07,19;UBERON:0008836,6.57e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,4.16684417736373,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12714592229504,0.824158583811665,1.14586024552114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,4.16684417736373,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12714592229504,0.824158583811665,1.14586024552114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p18@GREB1 | |short_description=p18@GREB1 | ||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p18@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GREB1_5end |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | -102bp_to_ENST00000263834_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
breast | 1.57e-45 | 10 |
chest | 1.83e-41 | 11 |
epididymis | 1.78e-29 | 1 |
subdivision of trunk | 1.36e-12 | 112 |
male genital duct | 8.99e-11 | 3 |
internal male genitalia | 8.99e-11 | 3 |
thoracic segment of trunk | 3.16e-09 | 52 |
duct of male reproductive system | 2.11e-08 | 4 |
trunk | 3.86e-07 | 199 |
liver | 6.57e-07 | 19 |
digestive gland | 6.57e-07 | 19 |
liver bud | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.02e-64 | 4 |
breast cancer | 4.02e-64 | 4 |
disease of anatomical entity | 1.71e-18 | 39 |
adenocarcinoma | 5.65e-11 | 25 |
carcinoma | 5.34e-07 | 106 |