FFCP PHASE1:Hg19::chr2:11679770..11679781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_ENST00000263834_5end | |association_with_transcript=-187bp_to_ENST00000263834_5end | ||
|cluster_id=chr2:11679770..11679781,+ | |||
|coexpression_cluster_id=C1879 | |coexpression_cluster_id=C1879 | ||
|description=CAGE_peak_7_at_GREB1_5end | |description=CAGE_peak_7_at_GREB1_5end | ||
|id=chr2:11679770..11679781,+ | |id=chr2:11679770..11679781,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.28e-07!3 | |ontology_enrichment_celltype=CL:0002541!3.28e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.26e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.26e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.57e-15;10!UBERON:0005564;1.57e-15;10!UBERON:0004161;2.35e-14;11!UBERON:0009497;3.03e-12;13!UBERON:0007297;1.64e-09;2!UBERON:0009847;7.70e-07;3!UBERON:0003353;7.70e-07;3 | |||
|ontology_enrichment_disease=DOID:5093!6.12e-12!4;DOID:1612!6.12e-12!4 | |ontology_enrichment_disease=DOID:5093!6.12e-12!4;DOID:1612!6.12e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.43e-37;4!DOID:1612;1.43e-37;4!DOID:7;1.58e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.43e-37,4;DOID:1612,1.43e-37,4;DOID:7,3.61e-15,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.48e-20!115;UBERON:0003135!2.24e-15!11;UBERON:0006947!4.98e-15!3;UBERON:0004054!4.98e-15!3;UBERON:0005904!2.15e-11!4;UBERON:0003101!5.79e-10!22;UBERON:0000079!5.79e-10!22;UBERON:0003133!3.54e-08!48;UBERON:0005156!9.49e-08!59;UBERON:0000990!9.49e-08!59;UBERON:0000476!3.28e-07!3;UBERON:0000920!3.28e-07!3;UBERON:0001896!4.91e-07!3;UBERON:0005290!4.91e-07!3;UBERON:0010096!4.91e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!7.48e-20!115;UBERON:0003135!2.24e-15!11;UBERON:0006947!4.98e-15!3;UBERON:0004054!4.98e-15!3;UBERON:0005904!2.15e-11!4;UBERON:0003101!5.79e-10!22;UBERON:0000079!5.79e-10!22;UBERON:0003133!3.54e-08!48;UBERON:0005156!9.49e-08!59;UBERON:0000990!9.49e-08!59;UBERON:0000476!3.28e-07!3;UBERON:0000920!3.28e-07!3;UBERON:0001896!4.91e-07!3;UBERON:0005290!4.91e-07!3;UBERON:0010096!4.91e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.12e-17;1!UBERON:0000310;1.74e-15;10!UBERON:0001443;3.86e-14;11!UBERON:0003135;5.17e-14;11!UBERON:0003101;2.87e-12;22!UBERON:0000079;2.87e-12;22!UBERON:0000473;3.85e-09;8!UBERON:0002107;1.46e-08;19!UBERON:0006925;1.46e-08;19!UBERON:0000991;1.04e-07;21!UBERON:0003133;2.84e-07;44!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.37e-18,1;UBERON:0000310,1.74e-15,10;UBERON:0001443,3.86e-14,11;UBERON:0003135,4.83e-14,11;UBERON:0003101,2.75e-12,22;UBERON:0000079,2.75e-12,22;UBERON:0005156,7.02e-10,59;UBERON:0000990,7.02e-10,59;UBERON:0000473,4.02e-09,8;UBERON:0003133,1.25e-08,48;UBERON:0002107,1.46e-08,19;UBERON:0006925,1.46e-08,19;UBERON:0008836,1.46e-08,19;UBERON:0000991,1.07e-07,21;UBERON:0009196,1.07e-07,21;UBERON:0009117,1.07e-07,21;UBERON:0005564,1.07e-07,21;UBERON:0008835,1.81e-07,22;UBERON:0003894,1.81e-07,22;UBERON:0004176,2.26e-07,22;UBERON:0009854,3.64e-07,23;UBERON:0009569,7.40e-07,112;UBERON:0006947,8.15e-07,3;UBERON:0004054,8.15e-07,3 | |||
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|short_description=p7@GREB1 | |short_description=p7@GREB1 | ||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p7@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GREB1_5end |
Coexpression cluster: | C1879_ovary_MCF7_breast_hepatocellular_uterus_epididymis_testis |
Association with transcript: | -187bp_to_ENST00000263834_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.26e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 7.37e-18 | 1 |
breast | 1.74e-15 | 10 |
chest | 3.86e-14 | 11 |
male reproductive organ | 4.83e-14 | 11 |
male organism | 2.75e-12 | 22 |
male reproductive system | 2.75e-12 | 22 |
reproductive structure | 7.02e-10 | 59 |
reproductive system | 7.02e-10 | 59 |
testis | 4.02e-09 | 8 |
reproductive organ | 1.25e-08 | 48 |
liver | 1.46e-08 | 19 |
digestive gland | 1.46e-08 | 19 |
liver bud | 1.46e-08 | 19 |
gonad | 1.07e-07 | 21 |
indifferent external genitalia | 1.07e-07 | 21 |
indifferent gonad | 1.07e-07 | 21 |
gonad primordium | 1.07e-07 | 21 |
hepatic diverticulum | 1.81e-07 | 22 |
liver primordium | 1.81e-07 | 22 |
external genitalia | 2.26e-07 | 22 |
digestive tract diverticulum | 3.64e-07 | 23 |
subdivision of trunk | 7.40e-07 | 112 |
male genital duct | 8.15e-07 | 3 |
internal male genitalia | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.43e-37 | 4 |
breast cancer | 1.43e-37 | 4 |
disease of anatomical entity | 3.61e-15 | 39 |