FFCP PHASE1:Hg19::chr3:169491171..169491205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55892 | |EntrezGene=55892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14955 | |HGNC=14955 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPC7,B2R6C9 | |UniProt=Q9NPC7,B2R6C9 | ||
|association_with_transcript=318bp_to_ENST00000349841,ENST00000356716,ENST00000392733,NM_001185118,NM_018657,NR_033702,NR_033703,uc003fft.2,uc003ffu.2,uc003ffv.2,uc011bpm.1_5end | |association_with_transcript=318bp_to_ENST00000349841,ENST00000356716,ENST00000392733,NM_001185118,NM_018657,NR_033702,NR_033703,uc003fft.2,uc003ffu.2,uc003ffv.2,uc011bpm.1_5end | ||
|cluster_id=chr3:169491171..169491205,+ | |||
|description=CAGE_peak_1_at_MYNN_5end | |description=CAGE_peak_1_at_MYNN_5end | ||
|id=chr3:169491171..169491205,+ | |id=chr3:169491171..169491205,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.42e-14!140;CL:0000037!1.36e-11!172;CL:0000566!1.36e-11!172;CL:0002031!1.53e-11!124;CL:0000542!5.10e-11!53;CL:0000051!5.10e-11!53;CL:0002032!8.56e-11!165;CL:0000837!8.56e-11!165;CL:0000838!1.26e-10!52;CL:0000988!7.48e-10!182;CL:0002087!2.21e-09!119;CL:0000791!4.73e-07!18;CL:0000789!4.73e-07!18;CL:0002420!4.73e-07!18;CL:0002419!4.73e-07!18;CL:0000790!4.73e-07!18 | |ontology_enrichment_celltype=CL:0000738!2.42e-14!140;CL:0000037!1.36e-11!172;CL:0000566!1.36e-11!172;CL:0002031!1.53e-11!124;CL:0000542!5.10e-11!53;CL:0000051!5.10e-11!53;CL:0002032!8.56e-11!165;CL:0000837!8.56e-11!165;CL:0000838!1.26e-10!52;CL:0000988!7.48e-10!182;CL:0002087!2.21e-09!119;CL:0000791!4.73e-07!18;CL:0000789!4.73e-07!18;CL:0002420!4.73e-07!18;CL:0002419!4.73e-07!18;CL:0000790!4.73e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.27e-07;18!CL:0000789;4.27e-07;18!CL:0002419;4.27e-07;18!CL:0000542;8.05e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.54e-14,136;CL:0002031,1.02e-11,120;CL:0000037,1.09e-11,168;CL:0000542,5.10e-11,53;CL:0000051,5.10e-11,53;CL:0002032,6.92e-11,161;CL:0000837,6.92e-11,161;CL:0000838,1.26e-10,52;CL:0000988,2.61e-10,177;CL:0002087,1.61e-09,115;CL:0000791,4.73e-07,18;CL:0000789,4.73e-07,18;CL:0002420,4.73e-07,18;CL:0002419,4.73e-07,18;CL:0000790,4.73e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.27e-07;18!CL:0000051;8.05e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@MYNN | |short_description=p1@MYNN | ||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p1@MYNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYNN_5end |
Coexpression cluster: | NA |
Association with transcript: | 318bp_to_ENST00000349841, ENST00000356716, ENST00000392733, NM_001185118, NM_018657, NR_033702, NR_033703, uc003fft.2, uc003ffu.2, uc003ffv.2, uc011bpm.1_5end |
EntrezGene: | MYNN |
HGNC: | 14955 |
UniProt: | Q9NPC7B2R6C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.54e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.02e-11 | 120 |
hematopoietic stem cell | 1.09e-11 | 168 |
lymphocyte | 5.10e-11 | 53 |
common lymphoid progenitor | 5.10e-11 | 53 |
hematopoietic oligopotent progenitor cell | 6.92e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.92e-11 | 161 |
lymphoid lineage restricted progenitor cell | 1.26e-10 | 52 |
hematopoietic cell | 2.61e-10 | 177 |
nongranular leukocyte | 1.61e-09 | 115 |
mature alpha-beta T cell | 4.73e-07 | 18 |
alpha-beta T cell | 4.73e-07 | 18 |
immature T cell | 4.73e-07 | 18 |
mature T cell | 4.73e-07 | 18 |
immature alpha-beta T cell | 4.73e-07 | 18 |