FFCP PHASE1:Hg19::chr10:118719743..118719755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000490615_5end | |association_with_transcript=86bp_to_ENST00000490615_5end | ||
|cluster_id=chr10:118719743..118719755,- | |||
|coexpression_cluster_id=C2983 | |||
|description=CAGE_peak_13_at_KIAA1598_5end | |description=CAGE_peak_13_at_KIAA1598_5end | ||
|id=chr10:118719743..118719755,- | |id=chr10:118719743..118719755,- | ||
|ontology_enrichment_celltype=CL:0000235!4.95e-10!10;CL:0000148!2.88e-08!10;CL:0000541!2.88e-08!10 | |ontology_enrichment_celltype=CL:0000235!4.95e-10!10;CL:0000148!2.88e-08!10;CL:0000541!2.88e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.69e-22;10!CL:0000235;7.85e-17;6!CL:0000147;6.47e-16;14!CL:0000710;5.74e-11;20!CL:0000840;1.43e-09;5!CL:0002567;2.38e-09;3!CL:0000075;5.73e-08;27!CL:0002566;1.03e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.67e-22,10;CL:0000541,1.67e-22,10;CL:0000235,6.82e-17,6;CL:0000147,6.40e-16,14;CL:0000710,5.70e-11,20;CL:0000840,1.33e-09,5;CL:0001029,1.33e-09,5;CL:0002567,2.33e-09,3;CL:0000075,5.70e-08,27;CL:0002566,1.03e-07,1;CL:0000133,7.07e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.84e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.85e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.62e-25!57;UBERON:0005068!7.62e-25!57;UBERON:0006241!7.62e-25!57;UBERON:0007135!7.62e-25!57;UBERON:0002020!3.59e-24!34;UBERON:0003528!3.59e-24!34;UBERON:0001893!4.48e-24!34;UBERON:0002780!3.59e-23!41;UBERON:0001890!3.59e-23!41;UBERON:0006240!3.59e-23!41;UBERON:0002791!7.49e-23!33;UBERON:0003080!1.84e-22!42;UBERON:0002616!8.20e-22!59;UBERON:0001017!1.97e-21!82;UBERON:0001869!7.58e-21!32;UBERON:0000955!3.02e-20!69;UBERON:0006238!3.02e-20!69;UBERON:0005743!5.47e-20!86;UBERON:0000073!1.58e-18!94;UBERON:0001016!1.58e-18!94;UBERON:0002619!7.97e-18!22;UBERON:0003056!1.68e-17!61;UBERON:0003075!3.93e-17!86;UBERON:0007284!3.93e-17!86;UBERON:0007023!5.54e-17!115;UBERON:0002346!5.75e-16!90;UBERON:0000956!2.79e-15!25;UBERON:0000203!2.79e-15!25;UBERON:0001950!1.47e-14!20;UBERON:0000033!1.64e-13!123;UBERON:0000153!2.60e-13!129;UBERON:0007811!2.60e-13!129;UBERON:0004121!6.03e-11!169;UBERON:0002308!6.85e-11!9;UBERON:0000125!6.85e-11!9;UBERON:0000924!1.90e-10!173;UBERON:0006601!1.90e-10!173;UBERON:0002298!7.91e-09!8;UBERON:0002420!2.99e-08!9;UBERON:0007245!2.99e-08!9;UBERON:0010009!2.99e-08!9;UBERON:0010011!2.99e-08!9;UBERON:0000454!2.99e-08!9;UBERON:0009663!9.92e-08!7;UBERON:0000200!1.24e-07!6;UBERON:0000349!3.20e-07!5;UBERON:0006331!5.14e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!7.62e-25!57;UBERON:0005068!7.62e-25!57;UBERON:0006241!7.62e-25!57;UBERON:0007135!7.62e-25!57;UBERON:0002020!3.59e-24!34;UBERON:0003528!3.59e-24!34;UBERON:0001893!4.48e-24!34;UBERON:0002780!3.59e-23!41;UBERON:0001890!3.59e-23!41;UBERON:0006240!3.59e-23!41;UBERON:0002791!7.49e-23!33;UBERON:0003080!1.84e-22!42;UBERON:0002616!8.20e-22!59;UBERON:0001017!1.97e-21!82;UBERON:0001869!7.58e-21!32;UBERON:0000955!3.02e-20!69;UBERON:0006238!3.02e-20!69;UBERON:0005743!5.47e-20!86;UBERON:0000073!1.58e-18!94;UBERON:0001016!1.58e-18!94;UBERON:0002619!7.97e-18!22;UBERON:0003056!1.68e-17!61;UBERON:0003075!3.93e-17!86;UBERON:0007284!3.93e-17!86;UBERON:0007023!5.54e-17!115;UBERON:0002346!5.75e-16!90;UBERON:0000956!2.79e-15!25;UBERON:0000203!2.79e-15!25;UBERON:0001950!1.47e-14!20;UBERON:0000033!1.64e-13!123;UBERON:0000153!2.60e-13!129;UBERON:0007811!2.60e-13!129;UBERON:0004121!6.03e-11!169;UBERON:0002308!6.85e-11!9;UBERON:0000125!6.85e-11!9;UBERON:0000924!1.90e-10!173;UBERON:0006601!1.90e-10!173;UBERON:0002298!7.91e-09!8;UBERON:0002420!2.99e-08!9;UBERON:0007245!2.99e-08!9;UBERON:0010009!2.99e-08!9;UBERON:0010011!2.99e-08!9;UBERON:0000454!2.99e-08!9;UBERON:0009663!9.92e-08!7;UBERON:0000200!1.24e-07!6;UBERON:0000349!3.20e-07!5;UBERON:0006331!5.14e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001954;8.45e-13;2!UBERON:0005162;8.45e-13;2!UBERON:0000122;8.45e-13;2!UBERON:0003022;8.45e-13;2!UBERON:0002421;8.45e-13;2!UBERON:0002600;8.45e-13;2!UBERON:0002336;3.10e-07;1!UBERON:0002038;3.10e-07;1!UBERON:0000941;3.10e-07;1!UBERON:0001785;3.10e-07;1!UBERON:0002464;3.10e-07;1!UBERON:0004904;3.10e-07;1!UBERON:0011215;3.10e-07;1!UBERON:0001018;3.10e-07;1!UBERON:0001021;3.10e-07;1!UBERON:0009661;3.10e-07;1!UBERON:0002950;3.10e-07;1!UBERON:0002473;3.10e-07;1!UBERON:0005340;3.10e-07;1!UBERON:0003544;3.10e-07;1!UBERON:0005970;3.10e-07;1!UBERON:0002316;3.10e-07;1!UBERON:0001020;3.10e-07;1!UBERON:0001891;3.10e-07;1!UBERON:0002437;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.96e-13,2;UBERON:0003022,7.96e-13,2;UBERON:0002421,7.96e-13,2;UBERON:0002600,7.96e-13,2;UBERON:0005162,1.14e-12,2;UBERON:0000122,1.14e-12,2;UBERON:0002038,2.07e-07,1;UBERON:0009661,2.07e-07,1;UBERON:0002950,2.07e-07,1;UBERON:0001891,2.07e-07,1;UBERON:0009616,2.07e-07,1;UBERON:0010286,2.07e-07,1;UBERON:0000941,3.01e-07,1;UBERON:0001785,3.01e-07,1;UBERON:0002464,3.01e-07,1;UBERON:0004904,3.01e-07,1;UBERON:0001021,3.01e-07,1;UBERON:0003902,3.01e-07,1;UBERON:0005425,3.01e-07,1;UBERON:0002336,4.34e-07,1;UBERON:0011215,4.34e-07,1;UBERON:0001018,4.34e-07,1;UBERON:0002473,4.34e-07,1;UBERON:0005340,4.34e-07,1;UBERON:0003544,4.34e-07,1;UBERON:0005970,4.34e-07,1;UBERON:0002316,4.34e-07,1;UBERON:0001020,4.34e-07,1;UBERON:0002437,4.34e-07,1;UBERON:0001016,4.96e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.0478326039817,0,0,1.9472843619281,2.08955684759121,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0.738651018262192,6.31811515875942,2.37809859661965,0,0.16798212819886,0,0,0,0,0,0,0,0,0,10.3501567696236,12.9876064689814,2.34434894420094,0,13.3675740514321,42.3483711559924,16.8637595252041,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,25.5671706255387,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,1.22583065500418,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.05786081394152,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.443716206147409,0.310482014706917,0,0,36.2441390924538,32.2575826905813,0,0,0,0,0,0.554805861502613,0,0.754703705257725,0,0,0,0,0,0.63718706865481,0,0,0,0.797525143673985,0.521745061811734,0,0.380805212168795,1.62748293281865,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.41023272848151,0.504143392443436,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48523200163543,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,1.72007499781742,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,3.41004141982077,3.21556956187414,0,1.13776295448085,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.0478326039817,0,0,1.9472843619281,2.08955684759121,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0.738651018262192,6.31811515875942,2.37809859661965,0,0.16798212819886,0,0,0,0,0,0,0,0,0,10.3501567696236,12.9876064689814,2.34434894420094,0,13.3675740514321,42.3483711559924,16.8637595252041,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,25.5671706255387,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,1.22583065500418,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.05786081394152,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.443716206147409,0.310482014706917,0,0,36.2441390924538,32.2575826905813,0,0,0,0,0,0.554805861502613,0,0.754703705257725,0,0,0,0,0,0.63718706865481,0,0,0,0.797525143673985,0.521745061811734,0,0.380805212168795,1.62748293281865,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.41023272848151,0.504143392443436,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48523200163543,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,1.72007499781742,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,3.41004141982077,3.21556956187414,0,1.13776295448085,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@KIAA1598 | |short_description=p13@KIAA1598 | ||
}} | }} |
Latest revision as of 14:53, 16 September 2015
Short description: | p13@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA1598_5end |
Coexpression cluster: | C2983_Melanocyte_astrocytoma_melanoma_Macrophage_Monocytederived_Dendritic_substantia |
Association with transcript: | 86bp_to_ENST00000490615_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-22 | 10 |
melanoblast | 1.67e-22 | 10 |
macrophage | 6.82e-17 | 6 |
pigment cell | 6.40e-16 | 14 |
neurecto-epithelial cell | 5.70e-11 | 20 |
immature conventional dendritic cell | 1.33e-09 | 5 |
common dendritic progenitor | 1.33e-09 | 5 |
light melanocyte | 2.33e-09 | 3 |
columnar/cuboidal epithelial cell | 5.70e-08 | 27 |
dark melanocyte | 1.03e-07 | 1 |
neurectodermal cell | 7.07e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.96e-13 | 2 |
lobe parts of cerebral cortex | 7.96e-13 | 2 |
hippocampal formation | 7.96e-13 | 2 |
limbic lobe | 7.96e-13 | 2 |
multi cell component structure | 1.14e-12 | 2 |
neuron projection bundle | 1.14e-12 | 2 |
substantia nigra | 2.07e-07 | 1 |
midbrain nucleus | 2.07e-07 | 1 |
regional part of midbrain | 2.07e-07 | 1 |
midbrain | 2.07e-07 | 1 |
presumptive midbrain | 2.07e-07 | 1 |
midbrain neural tube | 2.07e-07 | 1 |
cranial nerve II | 3.01e-07 | 1 |
cranial nerve | 3.01e-07 | 1 |
nerve trunk | 3.01e-07 | 1 |
nerve connecting eye with brain | 3.01e-07 | 1 |
nerve | 3.01e-07 | 1 |
retinal neural layer | 3.01e-07 | 1 |
presumptive neural retina | 3.01e-07 | 1 |
corpus callosum | 4.34e-07 | 1 |
central nervous system cell part cluster | 4.34e-07 | 1 |
axon tract | 4.34e-07 | 1 |
intercerebral commissure | 4.34e-07 | 1 |
dorsal telencephalic commissure | 4.34e-07 | 1 |
brain white matter | 4.34e-07 | 1 |
brain commissure | 4.34e-07 | 1 |
white matter | 4.34e-07 | 1 |
nervous system commissure | 4.34e-07 | 1 |
cerebral hemisphere white matter | 4.34e-07 | 1 |
nervous system | 4.96e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.85e-14 | 2 |