FFCP PHASE1:Hg19::chr10:118719724..118719735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_ENST00000490615_5end | |association_with_transcript=106bp_to_ENST00000490615_5end | ||
|cluster_id=chr10:118719724..118719735,- | |||
|coexpression_cluster_id=C2983 | |||
|description=CAGE_peak_14_at_KIAA1598_5end | |description=CAGE_peak_14_at_KIAA1598_5end | ||
|id=chr10:118719724..118719735,- | |id=chr10:118719724..118719735,- | ||
|ontology_enrichment_celltype=CL:0000148!1.43e-08!10;CL:0000541!1.43e-08!10;CL:0000235!2.35e-07!10 | |ontology_enrichment_celltype=CL:0000148!1.43e-08!10;CL:0000541!1.43e-08!10;CL:0000235!2.35e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.24e-37;10!CL:0000147;8.15e-27;14!CL:0000710;1.11e-18;20!CL:0000235;2.28e-16;6!CL:0002567;9.96e-15;3!CL:0000075;9.49e-14;27!CL:0002566;5.04e-12;1!CL:0002077;1.12e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.47e-38,10;CL:0000541,7.47e-38,10;CL:0000147,5.69e-27,14;CL:0000710,8.62e-19,20;CL:0000235,2.22e-16,6;CL:0002567,5.68e-15,3;CL:0000075,7.91e-14,27;CL:0002566,4.53e-12,1;CL:0000333,1.67e-11,41;CL:0002077,6.70e-11,34;CL:0000133,6.65e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.13e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.20e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.20e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-23!57;UBERON:0005068!1.47e-23!57;UBERON:0006241!1.47e-23!57;UBERON:0007135!1.47e-23!57;UBERON:0001017!2.66e-23!82;UBERON:0000073!5.92e-22!94;UBERON:0001016!5.92e-22!94;UBERON:0005743!1.19e-21!86;UBERON:0002780!1.12e-19!41;UBERON:0001890!1.12e-19!41;UBERON:0006240!1.12e-19!41;UBERON:0003080!4.93e-19!42;UBERON:0002020!5.35e-19!34;UBERON:0003528!5.35e-19!34;UBERON:0001893!8.20e-19!34;UBERON:0000955!1.60e-18!69;UBERON:0006238!1.60e-18!69;UBERON:0002791!9.26e-18!33;UBERON:0002616!1.44e-17!59;UBERON:0001869!2.75e-16!32;UBERON:0003075!2.75e-15!86;UBERON:0007284!2.75e-15!86;UBERON:0002346!3.80e-14!90;UBERON:0004121!5.77e-12!169;UBERON:0003056!8.41e-12!61;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0002308!2.72e-11!9;UBERON:0000125!2.72e-11!9;UBERON:0002619!1.10e-10!22;UBERON:0007023!1.17e-10!115;UBERON:0000956!1.57e-10!25;UBERON:0000203!1.57e-10!25;UBERON:0000033!1.89e-09!123;UBERON:0000153!3.21e-09!129;UBERON:0007811!3.21e-09!129;UBERON:0002420!1.07e-08!9;UBERON:0007245!1.07e-08!9;UBERON:0010009!1.07e-08!9;UBERON:0010011!1.07e-08!9;UBERON:0000454!1.07e-08!9;UBERON:0001950!1.96e-08!20;UBERON:0009663!2.08e-08!7;UBERON:0002298!7.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.13e-11;1!UBERON:0000941;1.13e-11;1!UBERON:0001785;1.13e-11;1!UBERON:0002464;1.13e-11;1!UBERON:0004904;1.13e-11;1!UBERON:0001021;1.13e-11;1!UBERON:0009661;1.13e-11;1!UBERON:0002950;1.13e-11;1!UBERON:0001891;1.13e-11;1!UBERON:0001872;3.30e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.61e-12,1;UBERON:0001785,9.61e-12,1;UBERON:0002464,9.61e-12,1;UBERON:0004904,9.61e-12,1;UBERON:0001021,9.61e-12,1;UBERON:0003902,9.61e-12,1;UBERON:0005425,9.61e-12,1;UBERON:0002038,1.81e-11,1;UBERON:0009661,1.81e-11,1;UBERON:0002950,1.81e-11,1;UBERON:0001891,1.81e-11,1;UBERON:0009616,1.81e-11,1;UBERON:0010286,1.81e-11,1;UBERON:0001872,3.90e-09,5 | |||
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| ||
|short_description=p14@KIAA1598 | |short_description=p14@KIAA1598 | ||
}} | }} |
Latest revision as of 14:52, 16 September 2015
Short description: | p14@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KIAA1598_5end |
Coexpression cluster: | C2983_Melanocyte_astrocytoma_melanoma_Macrophage_Monocytederived_Dendritic_substantia |
Association with transcript: | 106bp_to_ENST00000490615_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.47e-38 | 10 |
melanoblast | 7.47e-38 | 10 |
pigment cell | 5.69e-27 | 14 |
neurecto-epithelial cell | 8.62e-19 | 20 |
macrophage | 2.22e-16 | 6 |
light melanocyte | 5.68e-15 | 3 |
columnar/cuboidal epithelial cell | 7.91e-14 | 27 |
dark melanocyte | 4.53e-12 | 1 |
migratory neural crest cell | 1.67e-11 | 41 |
ecto-epithelial cell | 6.70e-11 | 34 |
neurectodermal cell | 6.65e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.61e-12 | 1 |
cranial nerve | 9.61e-12 | 1 |
nerve trunk | 9.61e-12 | 1 |
nerve connecting eye with brain | 9.61e-12 | 1 |
nerve | 9.61e-12 | 1 |
retinal neural layer | 9.61e-12 | 1 |
presumptive neural retina | 9.61e-12 | 1 |
substantia nigra | 1.81e-11 | 1 |
midbrain nucleus | 1.81e-11 | 1 |
regional part of midbrain | 1.81e-11 | 1 |
midbrain | 1.81e-11 | 1 |
presumptive midbrain | 1.81e-11 | 1 |
midbrain neural tube | 1.81e-11 | 1 |
parietal lobe | 3.90e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.20e-22 | 2 |