FFCP PHASE1:Hg19::chr2:26467557..26467568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3030 | |EntrezGene=3030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4801 | |HGNC=4801 | ||
|TSSclassifier=strong | |||
|UniProt=P40939,E9KL44 | |UniProt=P40939,E9KL44 | ||
|association_with_transcript=25bp_to_ENST00000380649,NM_000182,uc002rgy.2,uc010yks.1,uc010ykt.1_5end | |association_with_transcript=25bp_to_ENST00000380649,NM_000182,uc002rgy.2,uc010yks.1,uc010ykt.1_5end | ||
|cluster_id=chr2:26467557..26467568,- | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_3_at_HADHA_5end | |description=CAGE_peak_3_at_HADHA_5end | ||
|id=chr2:26467557..26467568,- | |id=chr2:26467557..26467568,- | ||
|ontology_enrichment_celltype=CL:0000055!2.29e-10!180;CL:0000136!1.16e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.29e-10!180;CL:0000136!1.16e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.00e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.16e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.14e-10!365;UBERON:0000481!7.44e-09!347;UBERON:0002100!1.51e-08!216;UBERON:0000119!7.25e-08!312;UBERON:0000914!1.09e-07!83;UBERON:0002329!1.09e-07!83;UBERON:0003077!1.09e-07!83;UBERON:0003059!1.09e-07!83;UBERON:0007282!1.09e-07!83;UBERON:0009618!1.09e-07!83;UBERON:0007285!1.09e-07!83;UBERON:0000483!1.49e-07!309;UBERON:0005256!2.29e-07!143;UBERON:0003104!3.72e-07!238;UBERON:0009142!3.72e-07!238;UBERON:0000468!4.85e-07!659 | |ontology_enrichment_uberon=UBERON:0000475!4.14e-10!365;UBERON:0000481!7.44e-09!347;UBERON:0002100!1.51e-08!216;UBERON:0000119!7.25e-08!312;UBERON:0000914!1.09e-07!83;UBERON:0002329!1.09e-07!83;UBERON:0003077!1.09e-07!83;UBERON:0003059!1.09e-07!83;UBERON:0007282!1.09e-07!83;UBERON:0009618!1.09e-07!83;UBERON:0007285!1.09e-07!83;UBERON:0000483!1.49e-07!309;UBERON:0005256!2.29e-07!143;UBERON:0003104!3.72e-07!238;UBERON:0009142!3.72e-07!238;UBERON:0000468!4.85e-07!659 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003077,2.26e-08,72;UBERON:0007285,2.26e-08,72;UBERON:0002329,3.42e-08,71;UBERON:0003059,3.42e-08,71;UBERON:0007282,3.42e-08,71;UBERON:0004290,3.42e-08,71;UBERON:0009618,3.42e-08,71;UBERON:0003104,3.84e-08,160;UBERON:0009142,3.84e-08,160;UBERON:0007524,4.63e-08,73;UBERON:0002100,6.20e-08,199;UBERON:0007503,1.06e-07,78;UBERON:0001134,2.65e-07,62;UBERON:0002036,2.65e-07,62;UBERON:0003082,2.65e-07,62;UBERON:0002385,4.87e-07,64;UBERON:0001015,4.87e-07,64;UBERON:0000383,4.87e-07,64 | |||
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| ||
|short_description=p3@HADHA | |short_description=p3@HADHA | ||
}} | }} |
Latest revision as of 14:52, 16 September 2015
Short description: | p3@HADHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HADHA_5end |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | 25bp_to_ENST00000380649, NM_000182, uc002rgy.2, uc010yks.1, uc010ykt.1_5end |
EntrezGene: | HADHA |
HGNC: | 4801 |
UniProt: | P40939E9KL44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.16e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
paraxial mesoderm | 2.26e-08 | 72 |
presumptive paraxial mesoderm | 2.26e-08 | 72 |
somite | 3.42e-08 | 71 |
presomitic mesoderm | 3.42e-08 | 71 |
presumptive segmental plate | 3.42e-08 | 71 |
dermomyotome | 3.42e-08 | 71 |
trunk paraxial mesoderm | 3.42e-08 | 71 |
mesenchyme | 3.84e-08 | 160 |
entire embryonic mesenchyme | 3.84e-08 | 160 |
dense mesenchyme tissue | 4.63e-08 | 73 |
trunk | 6.20e-08 | 199 |
epithelial vesicle | 1.06e-07 | 78 |
skeletal muscle tissue | 2.65e-07 | 62 |
striated muscle tissue | 2.65e-07 | 62 |
myotome | 2.65e-07 | 62 |
muscle tissue | 4.87e-07 | 64 |
musculature | 4.87e-07 | 64 |
musculature of body | 4.87e-07 | 64 |