FFCP PHASE1:Hg19::chr2:26467465..26467514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4801 | |||
|TSSclassifier=strong | |||
|UniProt=B4DYP2 | |||
|association_with_transcript=0bp_to_ENST00000457468_5end | |||
|cluster_id=chr2:26467465..26467514,- | |||
|description=CAGE_peak_1_at_HADHA_5end | |||
|id=chr2:26467465..26467514,- | |||
|ontology_enrichment_celltype=CL:0002194!1.19e-14!63;CL:0000576!1.19e-14!63;CL:0000040!1.19e-14!63;CL:0000559!1.19e-14!63;CL:0000839!7.48e-14!70;CL:0002009!9.44e-14!65;CL:0000860!6.60e-12!45;CL:0002057!1.21e-11!42;CL:0000557!2.05e-11!71;CL:0000766!5.51e-10!76;CL:0000763!7.32e-10!112;CL:0000049!7.32e-10!112;CL:0002371!2.29e-07!591;CL:0000723!3.79e-07!436;CL:0000048!7.02e-07!430;CL:0000034!7.97e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-09;33!CL:0002057;3.19e-09;33!CL:0000473;3.51e-09;39!CL:0000234;3.51e-09;39!CL:0000576;5.14e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.90e-15,59;CL:0000576,3.90e-15,59;CL:0000040,3.90e-15,59;CL:0000559,3.90e-15,59;CL:0000839,3.12e-14,66;CL:0002009,3.58e-14,61;CL:0000473,3.41e-13,48;CL:0000234,3.41e-13,48;CL:0000557,1.10e-11,67;CL:0000860,1.21e-11,42;CL:0002057,1.21e-11,42;CL:0000766,3.57e-10,72;CL:0000763,6.19e-10,108;CL:0000049,6.19e-10,108;CL:0000723,6.37e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.66e-14!167;UBERON:0004765!5.19e-11!101;UBERON:0001434!5.19e-11!101;UBERON:0002371!9.56e-11!80;UBERON:0001474!1.22e-10!86;UBERON:0002405!1.80e-10!115;UBERON:0002193!1.24e-09!112;UBERON:0002390!7.60e-09!102;UBERON:0003061!7.60e-09!102;UBERON:0000926!3.99e-08!448;UBERON:0004120!3.99e-08!448;UBERON:0006603!3.99e-08!448;UBERON:0003081!8.80e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.46e-14,167;UBERON:0004765,1.11e-12,90;UBERON:0001434,2.20e-11,100;UBERON:0002371,6.09e-11,76;UBERON:0001474,8.29e-11,82;UBERON:0002405,8.53e-11,93;UBERON:0002193,1.06e-09,108;UBERON:0002390,6.44e-09,98;UBERON:0003061,6.44e-09,98;UBERON:0003081,6.55e-08,203;UBERON:0000926,9.07e-07,315;UBERON:0004120,9.07e-07,315;UBERON:0006603,9.07e-07,315 | |||
|phase1_expression=204.751533437917,235.724676803972,235.81671805256,144.105549628508,173.867865732215,128.233763042754,222.903892788113,236.894952535062,470.656502016109,103.208253330634,23.0274385430901,115.992368601121,101.814053596183,290.85092945611,163.71030360959,116.984575482609,118.730822020723,125.613335546628,133.205654069808,125.214116064093,51.0001728110633,55.1680309801435,176.321368072731,105.803930581339,108.719925889099,218.007446598905,207.550290129463,204.569320634252,166.786453383935,182.318964096176,165.188803578253,99.2974922437241,136.747487125326,182.288727012226,110.700629629251,179.133232934151,214.034720275104,161.212663882776,142.587102151271,94.3997287613955,204.882658929531,169.396387327926,179.530170641028,182.474789668354,173.067182209475,140.456171427746,195.240391000775,166.522994648839,171.887035846782,226.989297542177,208.514815114688,210.469184600841,204.434188676815,185.254104188558,196.368405561796,230.973350618776,207.408674043963,206.296158720588,208.443130704585,226.254964088646,174.539035343138,173.501783898213,203.054003458821,156.424483445499,210.401698005723,170.782952632033,146.986050762956,204.767662184246,188.776816468113,232.17487498977,175.565855763677,217.283805232663,208.232250936102,238.507218246182,240.455463260464,216.577380810152,258.243523005792,253.19824133078,188.370387608978,194.09367848779,211.846261217031,221.754282670266,114.39755889986,120.150494477669,110.299147479081,113.936969425257,130.128695786704,124.721279470123,118.988077101275,97.3134829626071,75.1361119224472,98.6558478143177,87.9228424688026,185.039860010636,175.439180213221,214.131260922138,113.304827585568,76.244087973338,83.4742085938007,124.888312056837,113.746871055123,106.99920409605,83.7754932154019,147.618855372855,104.290491246092,122.508243704742,118.882896192842,114.385548515028,112.371276291735,109.351206561445,102.802206616336,131.860404009449,125.747005561427,127.616974998793,100.354102852778,131.212218843782,98.1044463620918,111.678919781855,110.569605412523,136.345997330713,119.148272055725,111.20288920046,140.938311456795,152.304067273758,151.166179128338,145.61801000707,112.494535578183,97.5776637207705,58.8368430723716,68.0674698249155,99.9608151887243,162.30960804828,172.358733365079,170.9607190779,219.084666947884,149.047068010688,242.562213850585,106.086401725975,173.944063581885,141.241626183653,112.95553440136,185.859308131254,81.2378492892369,110.122979506976,238.542334336192,268.159795440872,197.442571370515,146.910224572091,131.558829479429,106.236845380256,231.359442174845,153.12175792889,190.232994880962,154.894376087179,156.473289706295,144.712090060475,187.886474916593,245.495921210862,228.757706907555,209.869824203448,247.337200705016,219.71863855265,160.836895924244,176.478278566017,115.04015659921,234.947585115414,123.042096199141,99.3233257862902,160.982469339177,187.005334934921,122.378764945512,42.1697335795402,54.2892369807656,174.001526804871,116.291436696705,163.606621070637,298.847521095435,154.031265342113,102.144494073127,105.968066426896,145.178634192399,73.2602618798965,192.950841947855,139.021413575918,156.43304127958,191.921218253773,183.22394398464,109.428108666383,164.196200412749,232.752503190135,114.47768930268,144.444433331831,125.775277774038,124.579865544894,302.964790142262,149.243695533798,216.054208438526,119.988288585487,83.0816882375951,100.117749813183,40.2426159417094,234.997215079876,145.637957130966,182.031123873108,93.9412108684993,122.288630523809,69.4099832148477,178.882552843353,212.397328655613,169.351009333124,172.088703741564,204.662127529562,179.002243287168,192.457483414085,170.110806687073,238.312181124668,171.48912908371,214.568708107497,184.652096676452,224.52637292133,189.220112811355,180.043999532793,164.473774541173,206.209330325238,195.558968463628,144.549516076058,89.528700299123,95.1563736548264,99.8105969249163,95.8864758892176,100.171377797624,65.6959246336494,134.546597803642,102.275309172669,151.948413487729,224.289709239446,277.201720961121,157.466350853032,135.87926020295,151.113915736943,148.235099352337,146.632865874189,138.56604156088,156.13465484947,156.977172100277,146.588666796575,118.843028194568,47.6822030931716,97.5430406855418,67.6240072373493,174.921948054127,132.68167425148,166.011963777475,42.8219206432211,186.696449708446,172.425649350018,315.532070549799,240.539751971306,115.608318273375,342.762423976877,95.7876417612355,68.6356958284522,121.23832730123,177.373519611868,149.930902539144,265.489897432615,194.453915282176,177.50712403488,83.7616661836832,109.886228748144,221.595305478658,226.282124389643,160.224392947249,209.96378813038,231.31139052983,240.02523963136,256.495609020957,221.172427209125,156.036750420241,235.493027714261,155.053292297291,80.8579650609011,84.4542927023394,83.8249757951163,242.244466724625,268.537863167469,337.586247964935,217.262006448836,130.179605762408,259.496401977145,192.075362727749,170.327117120603,136.89146161365,201.753624293434,128.366813747473,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| |||
|short_description=p1@HADHA | |||
}} |
Latest revision as of 14:51, 16 September 2015
Short description: | p1@HADHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HADHA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457468_5end |
EntrezGene: | HADHA |
HGNC: | 4801 |
UniProt: | B4DYP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.90e-15 | 59 |
monocyte | 3.90e-15 | 59 |
monoblast | 3.90e-15 | 59 |
promonocyte | 3.90e-15 | 59 |
myeloid lineage restricted progenitor cell | 3.12e-14 | 66 |
macrophage dendritic cell progenitor | 3.58e-14 | 61 |
defensive cell | 3.41e-13 | 48 |
phagocyte | 3.41e-13 | 48 |
granulocyte monocyte progenitor cell | 1.10e-11 | 67 |
classical monocyte | 1.21e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-11 | 42 |
myeloid leukocyte | 3.57e-10 | 72 |
myeloid cell | 6.19e-10 | 108 |
common myeloid progenitor | 6.19e-10 | 108 |
somatic stem cell | 6.37e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.46e-14 | 167 |
skeletal element | 1.11e-12 | 90 |
skeletal system | 2.20e-11 | 100 |
bone marrow | 6.09e-11 | 76 |
bone element | 8.29e-11 | 82 |
immune system | 8.53e-11 | 93 |
hemolymphoid system | 1.06e-09 | 108 |
hematopoietic system | 6.44e-09 | 98 |
blood island | 6.44e-09 | 98 |
lateral plate mesoderm | 6.55e-08 | 203 |
mesoderm | 9.07e-07 | 315 |
mesoderm-derived structure | 9.07e-07 | 315 |
presumptive mesoderm | 9.07e-07 | 315 |