FFCP PHASE1:Hg19::chr9:139879342..139879362,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401562 | |EntrezGene=401562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=34436 | |HGNC=34436 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=418bp_to_BC062468_5end | |association_with_transcript=418bp_to_BC062468_5end | ||
|cluster_id=chr9:139879342..139879362,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_6_at_LCNL1_5end | |description=CAGE_peak_6_at_LCNL1_5end |
Latest revision as of 14:49, 16 September 2015
Short description: | p6@LCNL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LCNL1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 418bp_to_BC062468_5end |
EntrezGene: | LCNL1 |
HGNC: | 34436 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@LCNL1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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plasmacytoid dendritic cell | 4.49e-44 | 3 |
CD8-positive, alpha-beta T cell | 3.77e-32 | 11 |
mature alpha-beta T cell | 1.06e-19 | 18 |
alpha-beta T cell | 1.06e-19 | 18 |
immature T cell | 1.06e-19 | 18 |
mature T cell | 1.06e-19 | 18 |
immature alpha-beta T cell | 1.06e-19 | 18 |
T cell | 3.34e-14 | 25 |
pro-T cell | 3.34e-14 | 25 |
dendritic cell | 1.56e-12 | 10 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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middle temporal gyrus | 2.67e-08 | 2 |
Showing 1 to 1 of 1 entries