FFCP PHASE1:Hg19::chr2:26256938..26257031,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:26256938..26257031,+ to FFCP PHASE1:Hg19::chr2:26256938..26257031,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10890 | |EntrezGene=10890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9759 | |HGNC=9759 | ||
|TSSclassifier=strong | |||
|UniProt=P61026 | |UniProt=P61026 | ||
|association_with_transcript=0bp_to_ENST00000264710,ENST00000495146_5end | |||
|cluster_id=chr2:26256938..26257031,+ | |||
|description=CAGE_peak_1_at_RAB10_5end | |||
|id=chr2:26256938..26257031,+ | |||
|ontology_enrichment_celltype=CL:0002009!5.06e-19!65;CL:0002194!1.89e-18!63;CL:0000576!1.89e-18!63;CL:0000040!1.89e-18!63;CL:0000559!1.89e-18!63;CL:0000839!1.53e-17!70;CL:0000557!9.24e-17!71;CL:0000860!2.18e-15!45;CL:0002057!1.14e-14!42;CL:0000766!2.63e-12!76;CL:0000763!2.71e-08!112;CL:0000049!2.71e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.35e-15;39!CL:0000234;1.35e-15;39!CL:0000860;2.31e-15;33!CL:0002057;2.31e-15;33!CL:0000576;2.12e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,9.09e-19,61;CL:0002194,3.36e-18,59;CL:0000576,3.36e-18,59;CL:0000040,3.36e-18,59;CL:0000559,3.36e-18,59;CL:0000473,5.13e-18,48;CL:0000234,5.13e-18,48;CL:0000839,3.17e-17,66;CL:0000557,1.99e-16,67;CL:0000860,1.14e-14,42;CL:0002057,1.14e-14,42;CL:0000766,6.60e-12,72;CL:0000763,6.84e-08,108;CL:0000049,6.84e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.68e-23!659;UBERON:0000922!1.59e-20!612;UBERON:0000467!2.06e-20!625;UBERON:0000480!2.69e-20!626;UBERON:0002050!2.64e-19!605;UBERON:0005423!2.64e-19!605;UBERON:0000923!4.82e-19!604;UBERON:0005291!4.82e-19!604;UBERON:0006598!4.82e-19!604;UBERON:0002532!4.82e-19!604;UBERON:0000062!1.03e-17!511;UBERON:0002371!7.22e-14!80;UBERON:0004765!3.05e-13!101;UBERON:0001434!3.05e-13!101;UBERON:0001474!2.79e-12!86;UBERON:0002204!1.07e-11!167;UBERON:0002405!4.09e-10!115;UBERON:0000926!3.52e-09!448;UBERON:0004120!3.52e-09!448;UBERON:0006603!3.52e-09!448;UBERON:0002390!4.51e-08!102;UBERON:0003061!4.51e-08!102;UBERON:0002193!2.05e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,7.28e-18,592;UBERON:0005423,1.58e-17,581;UBERON:0002050,8.25e-17,564;UBERON:0000923,1.68e-15,560;UBERON:0010316,1.68e-15,560;UBERON:0005291,1.68e-15,560;UBERON:0006598,1.68e-15,560;UBERON:0010317,1.68e-15,560;UBERON:0002532,1.68e-15,560;UBERON:0002371,1.80e-13,76;UBERON:0001434,2.46e-12,100;UBERON:0004765,2.98e-12,90;UBERON:0001474,7.25e-12,82;UBERON:0002405,3.47e-11,93;UBERON:0002204,4.15e-11,167;UBERON:0002390,1.13e-07,98;UBERON:0003061,1.13e-07,98;UBERON:0002193,5.00e-07,108 | |||
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|short_description=p1@RAB10 | |||
}} | }} |
Latest revision as of 14:33, 16 September 2015
Short description: | p1@RAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264710, ENST00000495146_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | P61026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 9.09e-19 | 61 |
monopoietic cell | 3.36e-18 | 59 |
monocyte | 3.36e-18 | 59 |
monoblast | 3.36e-18 | 59 |
promonocyte | 3.36e-18 | 59 |
defensive cell | 5.13e-18 | 48 |
phagocyte | 5.13e-18 | 48 |
myeloid lineage restricted progenitor cell | 3.17e-17 | 66 |
granulocyte monocyte progenitor cell | 1.99e-16 | 67 |
classical monocyte | 1.14e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-14 | 42 |
myeloid leukocyte | 6.60e-12 | 72 |
myeloid cell | 6.84e-08 | 108 |
common myeloid progenitor | 6.84e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
embryo | 7.28e-18 | 592 |
developing anatomical structure | 1.58e-17 | 581 |
embryonic structure | 8.25e-17 | 564 |
germ layer | 1.68e-15 | 560 |
germ layer / neural crest | 1.68e-15 | 560 |
embryonic tissue | 1.68e-15 | 560 |
presumptive structure | 1.68e-15 | 560 |
germ layer / neural crest derived structure | 1.68e-15 | 560 |
epiblast (generic) | 1.68e-15 | 560 |
bone marrow | 1.80e-13 | 76 |
skeletal system | 2.46e-12 | 100 |
skeletal element | 2.98e-12 | 90 |
bone element | 7.25e-12 | 82 |
immune system | 3.47e-11 | 93 |
musculoskeletal system | 4.15e-11 | 167 |
hematopoietic system | 1.13e-07 | 98 |
blood island | 1.13e-07 | 98 |
hemolymphoid system | 5.00e-07 | 108 |