FFCP PHASE1:Hg19::chr1:12677599..12677613,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:12677599..12677613,-
|short_description=p9@DHRS3
|description=CAGE_peak_9_at_DHRS3_5end
|association_with_transcript=123bp_to_ENST00000376223_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=123bp_to_ENST00000376223_5end | |||
|cluster_id=chr1:12677599..12677613,- | |||
|description=CAGE_peak_9_at_DHRS3_5end | |||
|id=chr1:12677599..12677613,- | |||
|ontology_enrichment_celltype=CL:0000066!2.97e-09!254;CL:0000223!2.80e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.97e-07;17!CL:0002518;1.97e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.48e-08,253;CL:0000223,2.08e-07,58;CL:1000497,3.68e-07,17;CL:0002518,3.68e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.13e-10!82;UBERON:0001008!1.38e-10!45;UBERON:0004119!1.67e-10!169;UBERON:0000925!1.67e-10!169;UBERON:0006595!1.67e-10!169;UBERON:0003064!3.66e-10!37;UBERON:0006554!3.87e-10!44;UBERON:0003914!1.69e-09!118;UBERON:0004921!1.70e-09!129;UBERON:0004185!1.70e-09!129;UBERON:0001007!3.92e-09!155;UBERON:0001555!3.92e-09!155;UBERON:0007026!3.92e-09!155;UBERON:0000466!4.54e-09!126;UBERON:0005177!8.63e-09!107;UBERON:0002100!1.26e-08!216;UBERON:0003104!1.45e-08!238;UBERON:0009142!1.45e-08!238;UBERON:0003929!2.02e-08!54;UBERON:0009569!2.37e-08!113;UBERON:0004111!4.10e-08!241;UBERON:0002417!8.11e-08!61;UBERON:0000916!8.11e-08!61;UBERON:0000077!2.37e-07!130;UBERON:0005172!5.83e-07!55;UBERON:0005173!5.83e-07!55;UBERON:0004122!6.32e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.21e-08;30!UBERON:0001008;1.21e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.76e-11,199;UBERON:0001008,3.97e-11,48;UBERON:0005911,1.17e-10,82;UBERON:0004119,1.21e-10,160;UBERON:0000925,1.21e-10,160;UBERON:0006595,1.21e-10,160;UBERON:0006554,1.45e-10,47;UBERON:0005177,4.32e-09,101;UBERON:0001007,5.76e-09,145;UBERON:0001555,5.76e-09,145;UBERON:0007026,5.76e-09,145;UBERON:0003064,8.47e-09,28;UBERON:0004921,9.99e-09,118;UBERON:0004122,2.13e-08,15;UBERON:0003914,2.14e-08,117;UBERON:0003929,3.33e-08,54;UBERON:0009569,4.40e-08,112;UBERON:0000162,1.42e-07,14;UBERON:0001353,1.42e-07,14;UBERON:0000163,1.42e-07,14;UBERON:0006866,1.42e-07,14;UBERON:0000164,1.42e-07,14;UBERON:0000931,1.42e-07,14;UBERON:0002417,4.76e-07,60;UBERON:0000916,4.76e-07,60;UBERON:0004111,6.19e-07,240 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.69145284915165,3.00219895059391,2.23480547213644,1.74467704820074,2.53299878168311,0,0.783556884599516,4.91467873003018,30.7032513907868,0,0,0,0.662794751455832,2.01697543935533,1.80808358407193,2.19093027116212,1.46379839637152,1.96993692922861,2.04000691244253,3.76145665773705,0.572471974262113,0.136874425072884,0.251085279189606,1.29902789771517,1.14940825229924,1.18066171970519,1.18009283054671,0.383829398097213,0,5.51652734687356,0.90361775633475,4.43704812200145,0,0,0,1.66198622559563,0.802177789880567,2.38711957787437,0.223915474239924,1.29557466407592,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0.689491361473237,1.29096936716765,0,0,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0,0,0.868755378820466,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,2.75393678159366,4.32311839024081,4.31763147898969,0.167186495390678,2.60737813306872,3.78758244587787,1.94826728407911,0.668462741311041,0,0,0,0.384273959177026,0.910415432919148,5.91976456573234,5.25065033793112,4.92665245749589,5.33831627383417,6.42097987415311,3.1360657141493,0.339928028092699,1.91610246800961,3.09264700934367,1.26509846009751,2.86708872891687,2.60433381542567,0.950452044448374,1.20460095262218,1.79181255616186,4.99722906209383,3.78843603270427,1.64225599384209,0.80642697289893,1.60464117470104,4.63438092424957,0,2.01210257911091,1.40648818027883,0.722878304769133,1.00267582127178,0.579386075843295,0,1.45990461090791,0.850813354476611,0.665188192387692,1.31752178539689,1.11332214173056,9.10738220731355,1.85392221392215,0,0.522389211897802,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0,0,0,1.06729878806013,0,4.83395180530976,1.52054421143703,2.4406205754817,0,2.43042584364528,0.446498641420399,0.22452937262617,0,0,0,0.183201743930407,0,0,2.61656431285521,0.496971951695318,0.633152558322899,1.45650098894541,2.58152958673932,1.77334191099179,0.560677600142307,4.2699598291882,0.98667019366864,0,0,0.326923806226917,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0.567160915800105,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.584622030967192,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0.386521706326594,0.545492241181669,1.72082757233402,0.853815942907168,0.662648841607426,1.39432731443422,0.518305275076852,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0.4115740113314,1.47008711385542,20.2808055714929,5.89696330006576,12.4065880403095,0,1.47586126251736,1.88724591328378,0.329250856225877,1.1240175325762,0.703702806881416,2.12953423864618,0,0,0,0.463721619900307,4.57893907519705,2.45422961193825,1.38895653772983,1.71228737011138,0,0,0,0,0.148631162288728,0,0.503946384596579,1.13420077793909,0.626909658919938,0.871901815541886,0.766765358330422,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,1.30788020649984,0,1.93907573636667,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,1.58390374586686,0.904318131178758,4.35766729300147,1.69954085009497,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,3.23441362289276,4.10697716095195,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.24538298343828,0.500170521059677,0,1.24782516918484,0,0.473107245101804,0.35142424497814,0,2.27407504055985,0,0,0,0,0,0,1.03384013061444,4.31428401637234,1.921096040462,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0,1.15325234330131,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0.710246901252508,0.0821271560138091,1.03850885836724,0.348631135379878,1.0877350463246,7.81975234182811,6.07734526976916,2.75554675595056,1.45672934405374,11.6700729313887,2.70719767744447,1.00119938235739,1.56869953835371,8.76835347919564,2.11103257785751,2.27466768141793,0.510281115829547,0.215915916102139,9.25363516141736,5.41892875087706,3.51182841698397,1.52925763827023,4.98645605357235,0.895499018888713,0.219259876645935,0,0.512900250232778,4.26419039409617,0.325378394664303,7.62503486193145,0.0915694648183434,0.165018999841176,1.14853107599234,0.650060246036521,6.42735719376638,0.48335359146061,0,0.307007349452259,0,0.107420244868274,0.725083469571143,0.255679882248303,1.24644849905432,4.29740779938543,0.576570202095319,2.4246415373971,3.33820676823315,0.464845549297286,3.46293581513704,0.6970372701606,0.924100740528266,0.532306030317022,4.34966496037536,1.8532421910392,2.86249773483982,0,0.316379424718726,0,0,0,1.59101623962968,0.78494864019923,0,0.274537029736055,0.353437207037059,2.22400729730648,0,2.52755073743389,0.48763373908959,3.1682753652067,6.3390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|phase1_expression=0.181678379270557,0.856402095563933,1.69145284915165,3.00219895059391,2.23480547213644,1.74467704820074,2.53299878168311,0,0.783556884599516,4.91467873003018,30.7032513907868,0,0,0,0.662794751455832,2.01697543935533,1.80808358407193,2.19093027116212,1.46379839637152,1.96993692922861,2.04000691244253,3.76145665773705,0.572471974262113,0.136874425072884,0.251085279189606,1.29902789771517,1.14940825229924,1.18066171970519,1.18009283054671,0.383829398097213,0,5.51652734687356,0.90361775633475,4.43704812200145,0,0,0,1.66198622559563,0.802177789880567,2.38711957787437,0.223915474239924,1.29557466407592,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0.689491361473237,1.29096936716765,0,0,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0,0,0.868755378820466,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,2.75393678159366,4.32311839024081,4.31763147898969,0.167186495390678,2.60737813306872,3.78758244587787,1.94826728407911,0.668462741311041,0,0,0,0.384273959177026,0.910415432919148,5.91976456573234,5.25065033793112,4.92665245749589,5.33831627383417,6.42097987415311,3.1360657141493,0.339928028092699,1.91610246800961,3.09264700934367,1.26509846009751,2.86708872891687,2.60433381542567,0.950452044448374,1.20460095262218,1.79181255616186,4.99722906209383,3.78843603270427,1.64225599384209,0.80642697289893,1.60464117470104,4.63438092424957,0,2.01210257911091,1.40648818027883,0.722878304769133,1.00267582127178,0.579386075843295,0,1.45990461090791,0.850813354476611,0.665188192387692,1.31752178539689,1.11332214173056,9.10738220731355,1.85392221392215,0,0.522389211897802,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0,0,0,1.06729878806013,0,4.83395180530976,1.52054421143703,2.4406205754817,0,2.43042584364528,0.446498641420399,0.22452937262617,0,0,0,0.183201743930407,0,0,2.61656431285521,0.496971951695318,0.633152558322899,1.45650098894541,2.58152958673932,1.77334191099179,0.560677600142307,4.2699598291882,0.98667019366864,0,0,0.326923806226917,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0.567160915800105,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.584622030967192,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0.386521706326594,0.545492241181669,1.72082757233402,0.853815942907168,0.662648841607426,1.39432731443422,0.518305275076852,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0.4115740113314,1.47008711385542,20.2808055714929,5.89696330006576,12.4065880403095,0,1.47586126251736,1.88724591328378,0.329250856225877,1.1240175325762,0.703702806881416,2.12953423864618,0,0,0,0.463721619900307,4.57893907519705,2.45422961193825,1.38895653772983,1.71228737011138,0,0,0,0,0.148631162288728,0,0.503946384596579,1.13420077793909,0.626909658919938,0.871901815541886,0.766765358330422,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,1.30788020649984,0,1.93907573636667,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,1.58390374586686,0.904318131178758,4.35766729300147,1.69954085009497,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,3.23441362289276,4.10697716095195,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.24538298343828,0.500170521059677,0,1.24782516918484,0,0.473107245101804,0.35142424497814,0,2.27407504055985,0,0,0,0,0,0,1.03384013061444,4.31428401637234,1.921096040462,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0,1.15325234330131,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0.710246901252508,0.0821271560138091,1.03850885836724,0.348631135379878,1.0877350463246,7.81975234182811,6.07734526976916,2.75554675595056,1.45672934405374,11.6700729313887,2.70719767744447,1.00119938235739,1.56869953835371,8.76835347919564,2.11103257785751,2.27466768141793,0.510281115829547,0.215915916102139,9.25363516141736,5.41892875087706,3.51182841698397,1.52925763827023,4.98645605357235,0.895499018888713,0.219259876645935,0,0.512900250232778,4.26419039409617,0.325378394664303,7.62503486193145,0.0915694648183434,0.165018999841176,1.14853107599234,0.650060246036521,6.42735719376638,0.48335359146061,0,0.307007349452259,0,0.107420244868274,0.725083469571143,0.255679882248303,1.24644849905432,4.29740779938543,0.576570202095319,2.4246415373971,3.33820676823315,0.464845549297286,3.46293581513704,0.6970372701606,0.924100740528266,0.532306030317022,4.34966496037536,1.8532421910392,2.86249773483982,0,0.316379424718726,0,0,0,1.59101623962968,0.78494864019923,0,0.274537029736055,0.353437207037059,2.22400729730648,0,2.52755073743389,0.48763373908959,3.1682753652067,6.3390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| ||
|short_description=p9@DHRS3 | |||
}} | }} |
Latest revision as of 14:26, 16 September 2015
Short description: | p9@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DHRS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_ENST00000376223_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.48e-08 | 253 |
endodermal cell | 2.08e-07 | 58 |
kidney cell | 3.68e-07 | 17 |
kidney epithelial cell | 3.68e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.76e-11 | 199 |
renal system | 3.97e-11 | 48 |
endo-epithelium | 1.17e-10 | 82 |
endoderm-derived structure | 1.21e-10 | 160 |
endoderm | 1.21e-10 | 160 |
presumptive endoderm | 1.21e-10 | 160 |
urinary system structure | 1.45e-10 | 47 |
trunk region element | 4.32e-09 | 101 |
digestive system | 5.76e-09 | 145 |
digestive tract | 5.76e-09 | 145 |
primitive gut | 5.76e-09 | 145 |
intermediate mesoderm | 8.47e-09 | 28 |
subdivision of digestive tract | 9.99e-09 | 118 |
genitourinary system | 2.13e-08 | 15 |
epithelial tube | 2.14e-08 | 117 |
gut epithelium | 3.33e-08 | 54 |
subdivision of trunk | 4.40e-08 | 112 |
cloaca | 1.42e-07 | 14 |
anal region | 1.42e-07 | 14 |
embryonic cloaca | 1.42e-07 | 14 |
terminal part of digestive tract | 1.42e-07 | 14 |
primitive urogenital sinus | 1.42e-07 | 14 |
proctodeum | 1.42e-07 | 14 |
abdominal segment of trunk | 4.76e-07 | 60 |
abdomen | 4.76e-07 | 60 |
anatomical conduit | 6.19e-07 | 240 |