FFCP PHASE1:Hg19::chr11:126275956..126275992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6484 | |EntrezGene=6484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10864 | |HGNC=10864 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009zce.2_5end | |association_with_transcript=0bp_to_uc009zce.2_5end | ||
|cluster_id=chr11:126275956..126275992,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_2_at_ST3GAL4_5end | |description=CAGE_peak_2_at_ST3GAL4_5end | ||
|id=chr11:126275956..126275992,+ | |id=chr11:126275956..126275992,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.60e-09!254;CL:0000039!2.17e-08!7;CL:0000586!2.17e-08!7 | |ontology_enrichment_celltype=CL:0000066!1.60e-09!254;CL:0000039!2.17e-08!7;CL:0000586!2.17e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.83e-13;7!CL:0000586;2.83e-13;7!CL:0002541;5.19e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.71e-13,7;CL:0000586,3.71e-13,7;CL:0002541,4.76e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.45e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.73e-18!106;DOID:0050687!1.83e-17!143;DOID:162!3.14e-09!235;DOID:14566!1.03e-08!239;DOID:5093!9.97e-07!4;DOID:1612!9.97e-07!4 | |ontology_enrichment_disease=DOID:305!1.73e-18!106;DOID:0050687!1.83e-17!143;DOID:162!3.14e-09!235;DOID:14566!1.03e-08!239;DOID:5093!9.97e-07!4;DOID:1612!9.97e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.59e-09;4!DOID:1612;8.59e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.61e-10,106;DOID:5093,8.60e-09,4;DOID:1612,8.60e-09,4;DOID:0050687,9.37e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.07e-14!169;UBERON:0000925!2.07e-14!169;UBERON:0006595!2.07e-14!169;UBERON:0001007!6.95e-14!155;UBERON:0001555!6.95e-14!155;UBERON:0007026!6.95e-14!155;UBERON:0004921!1.53e-13!129;UBERON:0004185!1.53e-13!129;UBERON:0000077!9.22e-13!130;UBERON:0001557!3.28e-11!19;UBERON:0000065!5.67e-11!53;UBERON:0000072!2.02e-10!46;UBERON:0001004!2.06e-10!72;UBERON:0001737!2.26e-10!9;UBERON:0008947!1.45e-09!38;UBERON:0003258!1.45e-09!38;UBERON:0001041!2.95e-09!98;UBERON:0002294!1.44e-07!7;UBERON:0001173!1.44e-07!7;UBERON:0004912!1.44e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!2.07e-14!169;UBERON:0000925!2.07e-14!169;UBERON:0006595!2.07e-14!169;UBERON:0001007!6.95e-14!155;UBERON:0001555!6.95e-14!155;UBERON:0007026!6.95e-14!155;UBERON:0004921!1.53e-13!129;UBERON:0004185!1.53e-13!129;UBERON:0000077!9.22e-13!130;UBERON:0001557!3.28e-11!19;UBERON:0000065!5.67e-11!53;UBERON:0000072!2.02e-10!46;UBERON:0001004!2.06e-10!72;UBERON:0001737!2.26e-10!9;UBERON:0008947!1.45e-09!38;UBERON:0003258!1.45e-09!38;UBERON:0001041!2.95e-09!98;UBERON:0002294!1.44e-07!7;UBERON:0001173!1.44e-07!7;UBERON:0004912!1.44e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.19e-11;3!UBERON:0000920;5.19e-11;3!UBERON:0005631;7.61e-09;10!UBERON:0000158;7.61e-09;10!UBERON:0003127;9.88e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.76e-11,3;UBERON:0005631,6.29e-09,14;UBERON:0000158,6.29e-09,14;UBERON:0003127,9.16e-09,2;UBERON:0003124,1.85e-08,7;UBERON:0004921,1.90e-08,118;UBERON:0001557,2.79e-08,19;UBERON:0000072,4.84e-07,47;UBERON:0001007,7.47e-07,145;UBERON:0001555,7.47e-07,145;UBERON:0007026,7.47e-07,145 | |||
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| ||
|short_description=p2@ST3GAL4 | |short_description=p2@ST3GAL4 | ||
}} | }} |
Latest revision as of 14:24, 16 September 2015
Short description: | p2@ST3GAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ST3GAL4_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_uc009zce.2_5end |
EntrezGene: | ST3GAL4 |
HGNC: | 10864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.71e-13 | 7 |
germ cell | 3.71e-13 | 7 |
chorionic membrane mesenchymal stem cell | 4.76e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.76e-11 | 3 |
extraembryonic membrane | 6.29e-09 | 14 |
membranous layer | 6.29e-09 | 14 |
open tracheal system trachea | 9.16e-09 | 2 |
chorion | 1.85e-08 | 7 |
subdivision of digestive tract | 1.90e-08 | 118 |
upper respiratory tract | 2.79e-08 | 19 |
segment of respiratory tract | 4.84e-07 | 47 |
digestive system | 7.47e-07 | 145 |
digestive tract | 7.47e-07 | 145 |
primitive gut | 7.47e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.61e-10 | 106 |
thoracic cancer | 8.60e-09 | 4 |
breast cancer | 8.60e-09 | 4 |
cell type cancer | 9.37e-09 | 143 |