FFCP PHASE1:Hg19::chr3:168864936..168864953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=Q03112 | |UniProt=Q03112 | ||
|association_with_transcript=-473bp_to_ENST00000468789_5end | |association_with_transcript=-473bp_to_ENST00000468789_5end | ||
|cluster_id=chr3:168864936..168864953,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_8_at_MECOM_5end | |description=CAGE_peak_8_at_MECOM_5end | ||
|id=chr3:168864936..168864953,- | |id=chr3:168864936..168864953,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000159;3.29e-16;2!CL:0002149;7.60e-12;6!CL:0002255;7.60e-12;6!CL:0000064;9.33e-11;3!CL:0000067;9.33e-11;3!CL:0005012;9.33e-11;3!CL:0002304;9.33e-11;3!CL:0000313;3.06e-09;1!CL:0000319;1.09e-08;1!CL:0002379;1.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.01e-16,2;CL:0002149,5.26e-12,6;CL:0002255,5.26e-12,6;CL:0000064,1.53e-10,3;CL:0000067,1.53e-10,3;CL:0005012,1.53e-10,3;CL:0002304,1.53e-10,3;CL:0000313,3.06e-09,1;CL:0000319,6.65e-09,1;CL:0002379,1.78e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.70e-12;10!UBERON:0010227;4.34e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;7.60e-12;6!DOID:299;2.04e-10;25!DOID:2152;3.06e-09;1!DOID:3620;1.09e-08;1!DOID:3030;1.09e-08;1!DOID:3565;1.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.26e-12,6;DOID:299,1.53e-10,25;DOID:2152,3.06e-09,1;DOID:3030,6.65e-09,1;DOID:3620,1.78e-08,1;DOID:3565,1.78e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.47e-07!286;UBERON:0004111!4.02e-07!241;UBERON:0000483!8.09e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;9.33e-11;3!UBERON:0001775;9.33e-11;3!UBERON:0004911;3.06e-09;1!UBERON:0002079;4.34e-09;1!UBERON:0005795;1.09e-08;1!UBERON:0007195;1.09e-08;1!UBERON:0002171;1.09e-08;1!UBERON:0006518;1.09e-08;1!UBERON:0008949;1.09e-08;1!UBERON:0000101;1.09e-08;1!UBERON:0002167;1.09e-08;1!UBERON:0000488;2.77e-08;4!UBERON:0000945;4.25e-07;5!UBERON:0010039;4.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.53e-10,3;UBERON:0001775,1.53e-10,3;UBERON:0004911,3.06e-09,1;UBERON:0002079,4.89e-09,1;UBERON:0002171,1.65e-08,1;UBERON:0006518,1.65e-08,1;UBERON:0008949,1.65e-08,1;UBERON:0000101,1.65e-08,1;UBERON:0002167,1.65e-08,1;UBERON:0007195,1.91e-08,1;UBERON:0000488,4.01e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.32348744029695,1.10864698731282,0.966182642624386,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.625098097988558,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,1.72101972449288,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.85422955527427,0.211931901159562,0,0.92747276314595,0,0,0,0,0,0.0920498986422993,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0.231860809950154,0.469634776943287,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,1.02341449813341,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.647747748306418,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0,0.165284915360978,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0,0,0,0.715624433709956,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.606547444719948,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0.717056761020258,0.294747123039363,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0,0,0,0,0,0,2.37008488922245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.568967241427498,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0.139423744278603,0.692552326534174,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,0.816164040795739,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0.695052375913368,0.150323419414493,0,0,0,0,0,0.569219092059585,0,1.38847790668105,0.195984794828755,0.609414446062818,0.52418000472609,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0.426905989478705,0.19980960958213,2.4495370916198,0,0,0.14405479798815,0.248505071130865,0,0.135904206073614,0,0.509991088181609,0.288950589901519,0,0.273810757783986,0,0.859530882839914,0,0.558564802544508,0,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,1.73372556058236,1.36381929150995,0.211200673038813,0,0,2.1440859791201,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0.747511887973863,3.14408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0.499921631848426,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0.318593534327405,0,0.310525913752519,0,0,0,0,0.761610424337591,0.406870733204662,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.906823702049089,1.389134845943,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0.276516872303462,0,0,0,0,1.72041036127604,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0,0.322951291263702,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,1.27762427639595,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0.236387681767936,0.222462803784138,0.470958557103084,0,0,0,0,0.9555033757741,0.285906176706625,0,0,0.347716544605159,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.354996002191696,0.340853619036631,0,0,1.86123831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| ||
|short_description=p8@MECOM | |short_description=p8@MECOM | ||
}} | }} |
Latest revision as of 14:23, 16 September 2015
Short description: | p8@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MECOM_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -473bp_to_ENST00000468789_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.01e-16 | 2 |
epithelial cell of uterus | 5.26e-12 | 6 |
stromal cell of endometrium | 5.26e-12 | 6 |
ciliated cell | 1.53e-10 | 3 |
ciliated epithelial cell | 1.53e-10 | 3 |
multi-ciliated epithelial cell | 1.53e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.53e-10 | 3 |
serous secreting cell | 3.06e-09 | 1 |
mucus secreting cell | 6.65e-09 | 1 |
meningothelial cell | 1.78e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.53e-10 | 3 |
ciliary body | 1.53e-10 | 3 |
epithelium of female gonad | 3.06e-09 | 1 |
left cardiac atrium | 4.89e-09 | 1 |
lower lobe of right lung | 1.65e-08 | 1 |
right lung lobe | 1.65e-08 | 1 |
lower lobe of lung | 1.65e-08 | 1 |
lobe of lung | 1.65e-08 | 1 |
right lung | 1.65e-08 | 1 |
stroma of bone marrow | 1.91e-08 | 1 |
atypical epithelium | 4.01e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.26e-12 | 6 |
adenocarcinoma | 1.53e-10 | 25 |
ovary epithelial cancer | 3.06e-09 | 1 |
mucinous adenocarcinoma | 6.65e-09 | 1 |
central nervous system cancer | 1.78e-08 | 1 |
meningioma | 1.78e-08 | 1 |