FFCP PHASE1:Hg19::chr1:236687206..236687219,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:236687206..236687219,+
|short_description=p3@LGALS8
|description=CAGE_peak_3_at_LGALS8_5end
|association_with_transcript=33bp_to_ENST00000238181_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3964 | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |HGNC=6569 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000238181_5end | |||
|cluster_id=chr1:236687206..236687219,+ | |||
|description=CAGE_peak_3_at_LGALS8_5end | |||
|id=chr1:236687206..236687219,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.11e-12!42;CL:0000860!1.13e-09!45;CL:0000839!6.99e-08!70;CL:0000766!2.11e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-13;33!CL:0002057;4.05e-13;33!CL:0000473;1.29e-09;39!CL:0000234;1.29e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,1.71e-11,48;CL:0000234,1.71e-11,48;CL:0000839,3.31e-11,66;CL:0000766,1.35e-10,72;CL:0000557,4.60e-09,67;CL:0002031,1.58e-08,120;CL:0000763,6.85e-08,108;CL:0000049,6.85e-08,108;CL:0002194,2.74e-07,59;CL:0000576,2.74e-07,59;CL:0000040,2.74e-07,59;CL:0000559,2.74e-07,59;CL:0002032,3.20e-07,161;CL:0000837,3.20e-07,161;CL:0000738,4.42e-07,136;CL:0002009,8.98e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.52e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.54e-07,76 | |||
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| ||
|short_description=p3@LGALS8 | |||
}} | }} |
Latest revision as of 14:20, 16 September 2015
Short description: | p3@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGALS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000238181_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.31e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-13 | 42 |
defensive cell | 1.71e-11 | 48 |
phagocyte | 1.71e-11 | 48 |
myeloid lineage restricted progenitor cell | 3.31e-11 | 66 |
myeloid leukocyte | 1.35e-10 | 72 |
granulocyte monocyte progenitor cell | 4.60e-09 | 67 |
hematopoietic lineage restricted progenitor cell | 1.58e-08 | 120 |
myeloid cell | 6.85e-08 | 108 |
common myeloid progenitor | 6.85e-08 | 108 |
monopoietic cell | 2.74e-07 | 59 |
monocyte | 2.74e-07 | 59 |
monoblast | 2.74e-07 | 59 |
promonocyte | 2.74e-07 | 59 |
hematopoietic oligopotent progenitor cell | 3.20e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-07 | 161 |
leukocyte | 4.42e-07 | 136 |
macrophage dendritic cell progenitor | 8.98e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.54e-07 | 76 |