FFCP PHASE1:Hg19::chr1:236686676..236686688,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3964 | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |HGNC=6569 | ||
|TSSclassifier=strong | |||
|UniProt=O00214 | |UniProt=O00214 | ||
|association_with_transcript=-50bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | |association_with_transcript=-50bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | ||
|cluster_id=chr1:236686676..236686688,+ | |||
|description=CAGE_peak_9_at_LGALS8_5end | |description=CAGE_peak_9_at_LGALS8_5end | ||
|id=chr1:236686676..236686688,+ | |id=chr1:236686676..236686688,+ | ||
|ontology_enrichment_celltype=CL:0000223!4.36e-17!59;CL:0000066!3.78e-12!254;CL:0002076!1.34e-09!43;CL:0000181!6.22e-07!12;CL:0000417!6.22e-07!12;CL:0000668!6.22e-07!12;CL:0000414!6.22e-07!12;CL:0000412!6.22e-07!12;CL:0000182!6.22e-07!12 | |ontology_enrichment_celltype=CL:0000223!4.36e-17!59;CL:0000066!3.78e-12!254;CL:0002076!1.34e-09!43;CL:0000181!6.22e-07!12;CL:0000417!6.22e-07!12;CL:0000668!6.22e-07!12;CL:0000414!6.22e-07!12;CL:0000412!6.22e-07!12;CL:0000182!6.22e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.37e-13;1!CL:0000164;5.37e-13;1!CL:0000502;5.37e-13;1!CL:0000172;5.37e-13;1!CL:0000173;5.37e-13;1!CL:0000047;3.92e-07;2!CL:0000317;3.92e-07;2!CL:1000448;3.92e-07;2!CL:0002308;3.92e-07;2!CL:0002140;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.33e-13,1;CL:0000164,3.33e-13,1;CL:0000502,3.33e-13,1;CL:0000172,3.33e-13,1;CL:0000173,3.33e-13,1;CL:0002351,3.33e-13,1;CL:0000317,3.93e-07,2;CL:1000448,3.93e-07,2;CL:0002308,3.93e-07,2;CL:0002140,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.18e-13;1!CL:0002351;5.37e-13;1!UBERON:0003124;5.37e-13;1 | |||
|ontology_enrichment_disease=DOID:305!7.59e-14!106;DOID:0050687!6.31e-12!143 | |ontology_enrichment_disease=DOID:305!7.59e-14!106;DOID:0050687!6.31e-12!143 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.37e-13;1!DOID:1357;5.37e-13;1!DOID:4430;5.37e-13;1!DOID:0050615;6.65e-12;16!DOID:1325;1.38e-07;7!DOID:3904;1.38e-07;7!DOID:1324;1.47e-07;15!DOID:3910;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.33e-13,1;DOID:0050619,8.64e-13,1;DOID:1357,8.64e-13,1;DOID:0050615,6.11e-12,16;DOID:1325,1.21e-07,7;DOID:3904,1.21e-07,7;DOID:1324,1.25e-07,15;DOID:3910,2.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.54e-15!169;UBERON:0000925!4.54e-15!169;UBERON:0006595!4.54e-15!169;UBERON:0001007!5.24e-15!155;UBERON:0001555!5.24e-15!155;UBERON:0007026!5.24e-15!155;UBERON:0004921!2.86e-13!129;UBERON:0004185!2.86e-13!129;UBERON:0000466!1.27e-11!126;UBERON:0000077!1.41e-11!130;UBERON:0005911!1.62e-11!82;UBERON:0001041!3.70e-10!98;UBERON:0000344!1.50e-09!12;UBERON:0005177!2.03e-09!107;UBERON:0003929!2.20e-09!54;UBERON:0000949!3.22e-08!45;UBERON:0001264!5.82e-08!10;UBERON:0003922!5.82e-08!10;UBERON:0003923!5.82e-08!10;UBERON:0003924!5.82e-08!10;UBERON:0003921!5.82e-08!10;UBERON:0002108!6.59e-08!14;UBERON:0007499!8.23e-08!25;UBERON:0002114!2.13e-07!12;UBERON:0000464!2.13e-07!104;UBERON:0009856!2.13e-07!26;UBERON:0005153!3.75e-07!37;UBERON:0001045!4.04e-07!11;UBERON:0002530!8.61e-07!59;UBERON:0001048!8.66e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!4.54e-15!169;UBERON:0000925!4.54e-15!169;UBERON:0006595!4.54e-15!169;UBERON:0001007!5.24e-15!155;UBERON:0001555!5.24e-15!155;UBERON:0007026!5.24e-15!155;UBERON:0004921!2.86e-13!129;UBERON:0004185!2.86e-13!129;UBERON:0000466!1.27e-11!126;UBERON:0000077!1.41e-11!130;UBERON:0005911!1.62e-11!82;UBERON:0001041!3.70e-10!98;UBERON:0000344!1.50e-09!12;UBERON:0005177!2.03e-09!107;UBERON:0003929!2.20e-09!54;UBERON:0000949!3.22e-08!45;UBERON:0001264!5.82e-08!10;UBERON:0003922!5.82e-08!10;UBERON:0003923!5.82e-08!10;UBERON:0003924!5.82e-08!10;UBERON:0003921!5.82e-08!10;UBERON:0002108!6.59e-08!14;UBERON:0007499!8.23e-08!25;UBERON:0002114!2.13e-07!12;UBERON:0000464!2.13e-07!104;UBERON:0009856!2.13e-07!26;UBERON:0005153!3.75e-07!37;UBERON:0001045!4.04e-07!11;UBERON:0002530!8.61e-07!59;UBERON:0001048!8.66e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.37e-13;1!UBERON:0001825;5.37e-13;1!UBERON:0000007;3.92e-07;2!UBERON:0002419;3.92e-07;2!UBERON:0004903;3.92e-07;2!UBERON:0007771;3.92e-07;2!UBERON:0003297;3.92e-07;2!UBERON:0001821;3.92e-07;2!UBERON:0003487;3.92e-07;2!UBERON:0001820;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.64e-13,1;UBERON:0001825,8.64e-13,1;UBERON:0000007,2.74e-07,2;UBERON:0004903,2.91e-07,2;UBERON:0002173,2.91e-07,2;UBERON:0002186,2.91e-07,2;UBERON:0002419,3.93e-07,2;UBERON:0007771,3.93e-07,2;UBERON:0003297,3.93e-07,2;UBERON:0001821,3.93e-07,2;UBERON:0003487,3.93e-07,2;UBERON:0001820,3.93e-07,2;UBERON:0005089,3.93e-07,2;UBERON:0005088,3.93e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.737930631258681,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.601519410909855,0.0920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0,2.62379999988587,0,0.682760689712998,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.586993856796269,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,3.49487848582361,0.630265458457789,0.576911008668165,0.741438982396034,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,1.1796972334774,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.383287282918786,0,0,1.82089681270989,0.227662191351298,1.1531308121143,0,0,0.40781839786099,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0,0,0.198950775161368,0,0,0,1.20770274853339,0.385870790539723,0,3.76253837089218,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.737930631258681,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.601519410909855,0.0920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0,2.62379999988587,0,0.682760689712998,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.586993856796269,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,3.49487848582361,0.630265458457789,0.576911008668165,0.741438982396034,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,1.1796972334774,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.383287282918786,0,0,1.82089681270989,0.227662191351298,1.1531308121143,0,0,0.40781839786099,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0,0,0.198950775161368,0,0,0,1.20770274853339,0.385870790539723,0,3.76253837089218,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p9@LGALS8 | |short_description=p9@LGALS8 | ||
}} | }} |
Latest revision as of 14:19, 16 September 2015
Short description: | p9@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LGALS8_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000341872, ENST00000450372, NM_006499, NM_201543, uc001hxy.1, uc001hxz.1, uc009xgg.1_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | O00214 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.33e-13 | 1 |
enteroendocrine cell | 3.33e-13 | 1 |
type D enteroendocrine cell | 3.33e-13 | 1 |
somatostatin secreting cell | 3.33e-13 | 1 |
pancreatic D cell | 3.33e-13 | 1 |
progenitor cell of endocrine pancreas | 3.33e-13 | 1 |
sebum secreting cell | 3.93e-07 | 2 |
epithelial cell of sweat gland | 3.93e-07 | 2 |
epithelial cell of skin gland | 3.93e-07 | 2 |
acinar cell of sebaceous gland | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.64e-13 | 1 |
paranasal sinus | 8.64e-13 | 1 |
pituitary gland | 2.74e-07 | 2 |
bronchoalveolar duct junction | 2.91e-07 | 2 |
alveolar duct | 2.91e-07 | 2 |
bronchiole | 2.91e-07 | 2 |
skin gland | 3.93e-07 | 2 |
epidermis gland | 3.93e-07 | 2 |
gland of integumental system | 3.93e-07 | 2 |
sebaceous gland | 3.93e-07 | 2 |
skin sebaceous gland | 3.93e-07 | 2 |
sweat gland | 3.93e-07 | 2 |
sweat gland placode | 3.93e-07 | 2 |
sebaceous gland placode | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.33e-13 | 1 |
paranasal sinus cancer | 8.64e-13 | 1 |
maxillary sinus cancer | 8.64e-13 | 1 |
respiratory system cancer | 6.11e-12 | 16 |
bronchus cancer | 1.21e-07 | 7 |
bronchogenic carcinoma | 1.21e-07 | 7 |
lung cancer | 1.25e-07 | 15 |
lung adenocarcinoma | 2.91e-07 | 2 |