FFCP PHASE1:Hg19::chr1:236558483..236558500,+: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128178 | |EntrezGene=128178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14341 | |HGNC=14341 | ||
|TSSclassifier=strong | |||
|UniProt=A8K7B5,Q8WWZ3 | |UniProt=A8K7B5,Q8WWZ3 | ||
|association_with_transcript=-215bp_to_ENST00000359362,NM_080738,uc001hxv.1_5end | |||
|cluster_id=chr1:236558483..236558500,+ | |||
|description=CAGE_peak_6_at_EDARADD_5end | |||
|id=chr1:236558483..236558500,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.08e-13!43;CL:0000066!2.11e-13!254;CL:0000223!1.03e-12!59;CL:0002251!1.54e-08!21;CL:0002322!5.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002621;6.38e-21;3!CL:0000575;1.11e-14;2!CL:0002076;6.97e-14;42!CL:0000097;8.80e-13;5!CL:0002159;7.65e-12;14!CL:0002251;7.85e-12;20!CL:0002166;8.18e-10;3!CL:0002252;5.58e-08;1!CL:0000163;2.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.31e-20,3;CL:0000575,1.80e-14,2;CL:0002076,3.16e-14,42;CL:0000097,5.13e-13,5;CL:0002028,5.13e-13,5;CL:0000223,4.78e-12,58;CL:0002159,7.78e-12,14;CL:0002251,9.48e-12,20;CL:0002166,5.01e-10,3;CL:0002252,5.40e-08,1;CL:0000163,1.95e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;5.12e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.33e-09!14;DOID:305!1.86e-07!106;DOID:0050687!3.20e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.11e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.67e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.19e-09!12;UBERON:0004119!2.27e-08!169;UBERON:0000925!2.27e-08!169;UBERON:0006595!2.27e-08!169;UBERON:0000161!3.53e-08!35;UBERON:0003729!4.16e-08!5;UBERON:0003343!6.99e-07!4;UBERON:0004785!6.99e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.38e-21;3!UBERON:0003729;4.11e-13;13!UBERON:0003929;2.85e-09;7!UBERON:0000161;6.70e-09;19!UBERON:0000166;6.70e-09;19!UBERON:0000344;1.92e-08;20!UBERON:0003350;3.61e-08;8!UBERON:0001828;3.61e-08;8!UBERON:0003343;4.95e-08;4!UBERON:0004785;4.95e-08;4!UBERON:0001301;5.58e-08;1!UBERON:0000997;5.58e-08;1!UBERON:0005056;5.58e-08;1!UBERON:0004176;5.58e-08;1!UBERON:0000964;8.99e-08;4!UBERON:0010409;8.99e-08;4!UBERON:0001708;1.43e-07;4!UBERON:0008895;1.43e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.31e-20,3;UBERON:0003729,5.32e-13,13;UBERON:0000033,2.17e-08,56;UBERON:0000344,2.26e-08,20;UBERON:0000997,4.40e-08,1;UBERON:0005056,4.40e-08,1;UBERON:0003350,4.68e-08,8;UBERON:0001828,4.68e-08,8;UBERON:0003343,4.89e-08,4;UBERON:0004785,4.89e-08,4;UBERON:0001301,9.94e-08,1;UBERON:0001708,9.97e-08,4;UBERON:0008895,9.97e-08,4;UBERON:0000964,1.14e-07,4;UBERON:0010409,1.14e-07,4;UBERON:0004348,1.14e-07,4;UBERON:0005427,1.14e-07,4;UBERON:0000166,1.37e-07,22;UBERON:0000153,1.93e-07,62;UBERON:0007811,1.93e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,2.29443676311203,0.243947412259191,0.530119073285941,1.16193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,1.27597587518148,0,0,0,0,0.264145302039678,1.4512968087854,1.72943944100354,2.77733353538036,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,1.00253235151642,0.184161977871793,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,1.53135254993501,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0.724999575434793,0.341380344856499,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,1.67308493134324,0,0,0.922255617552241,1.07709173291727,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.503464760927528,0,0.158936578980379,0,0,0.565412285735763,0,0,0,0,1.48260564340311,0.741383633679017,1.35748534357092,0,0,0,0,0.586993856796269,0,0.789168805698781,0,0.30607276163049,0,1.20258735531594,0.414752765588989,0.664653872707185,0,0,0,0,0,0,1.46988596121566,1.04471047896483,1.04836000945218,0,0,0,0.0821154570532092,0.484945082442097,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,3.49487848582361,0,0,0.0674035438541849,0.295282444544246,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0.335434687599266,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0.558644917973244,0,0.157723490002507,0,0,0,0,0,0,0,0.252071696221718,0,0,0,2.74813611802872,0.943757786781923,4.58571496304198,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,1.74362138052188,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.473314686579554,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0.815910637935854,0.534434810531121,0.827054095813604,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.404112318087525,0.0717222053926763,0,0.732629417498771,0.213454691755431,0,0.0898252021065869,0,0,0,0.665756774185513,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,2.29443676311203,0.243947412259191,0.530119073285941,1.16193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,1.27597587518148,0,0,0,0,0.264145302039678,1.4512968087854,1.72943944100354,2.77733353538036,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,1.00253235151642,0.184161977871793,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,1.53135254993501,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0.724999575434793,0.341380344856499,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,1.67308493134324,0,0,0.922255617552241,1.07709173291727,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.503464760927528,0,0.158936578980379,0,0,0.565412285735763,0,0,0,0,1.48260564340311,0.741383633679017,1.35748534357092,0,0,0,0,0.586993856796269,0,0.789168805698781,0,0.30607276163049,0,1.20258735531594,0.414752765588989,0.664653872707185,0,0,0,0,0,0,1.46988596121566,1.04471047896483,1.04836000945218,0,0,0,0.0821154570532092,0.484945082442097,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,3.49487848582361,0,0,0.0674035438541849,0.295282444544246,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0.335434687599266,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0.558644917973244,0,0.157723490002507,0,0,0,0,0,0,0,0.252071696221718,0,0,0,2.74813611802872,0.943757786781923,4.58571496304198,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,1.74362138052188,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.473314686579554,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0.815910637935854,0.534434810531121,0.827054095813604,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.404112318087525,0.0717222053926763,0,0.732629417498771,0.213454691755431,0,0.0898252021065869,0,0,0,0.665756774185513,0,0.641136984606466 | ||
|short_description=p6@EDARADD | |||
}} | }} |
Latest revision as of 14:11, 16 September 2015
Short description: | p6@EDARADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EDARADD_5end |
Coexpression cluster: | NA |
Association with transcript: | -215bp_to_ENST00000359362, NM_080738, uc001hxv.1_5end |
EntrezGene: | EDARADD |
HGNC: | 14341 |
UniProt: | A8K7B5Q8WWZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.31e-20 | 3 |
corneal epithelial cell | 1.80e-14 | 2 |
endo-epithelial cell | 3.16e-14 | 42 |
mast cell | 5.13e-13 | 5 |
basophil mast progenitor cell | 5.13e-13 | 5 |
endodermal cell | 4.78e-12 | 58 |
general ecto-epithelial cell | 7.78e-12 | 14 |
epithelial cell of alimentary canal | 9.48e-12 | 20 |
epithelial cell of Malassez | 5.01e-10 | 3 |
epithelial cell of esophagus | 5.40e-08 | 1 |
endocrine cell | 1.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.31e-20 | 3 |
mouth mucosa | 5.32e-13 | 13 |
head | 2.17e-08 | 56 |
mucosa | 2.26e-08 | 20 |
mammalian vulva | 4.40e-08 | 1 |
external female genitalia | 4.40e-08 | 1 |
epithelium of mucosa | 4.68e-08 | 8 |
gingiva | 4.68e-08 | 8 |
mucosa of oral region | 4.89e-08 | 4 |
respiratory system mucosa | 4.89e-08 | 4 |
epididymis | 9.94e-08 | 1 |
jaw skeleton | 9.97e-08 | 4 |
splanchnocranium | 9.97e-08 | 4 |
cornea | 1.14e-07 | 4 |
eye surface | 1.14e-07 | 4 |
optic eminence | 1.14e-07 | 4 |
corneal primordium | 1.14e-07 | 4 |
oral opening | 1.37e-07 | 22 |
anterior region of body | 1.93e-07 | 62 |
craniocervical region | 1.93e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.67e-08 | 14 |