FFCP PHASE1:Hg19::chr16:33647774..33647776,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=5643 | |HGNC=5643 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000438532_5end | |association_with_transcript=0bp_to_ENST00000438532_5end | ||
|cluster_id=chr16:33647774..33647776,- | |||
|coexpression_cluster_id=C282 | |coexpression_cluster_id=C282 | ||
|description=CAGE_peak_1_at_IGHV3OR16-8_5end | |description=CAGE_peak_1_at_IGHV3OR16-8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!9.62e-14!14;CL:0000945!9.04e-08!24;CL:0000826!9.04e-08!24 | |ontology_enrichment_celltype=CL:0000236!9.62e-14!14;CL:0000945!9.04e-08!24;CL:0000826!9.04e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.95e-07;13 | |ontology_enrichment_celltype_v019=CL:0000236;4.95e-07;13 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.66e-21;1!UBERON:0006595;6.70e-07;86 | |ontology_enrichment_development_v019=UBERON:0008801;4.66e-21;1!UBERON:0006595;6.70e-07;86 | ||
|ontology_enrichment_disease=DOID:12603!2.95e-07!1 | |ontology_enrichment_disease=DOID:12603!2.95e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:12603;1.53e-21;1 | |ontology_enrichment_disease_v019=DOID:12603;1.53e-21;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,1.53e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-31!115;UBERON:0001829!2.27e-12!2;UBERON:0001044!3.91e-09!6;UBERON:0003293!3.91e-09!6;UBERON:0003294!3.91e-09!6;UBERON:0010047!3.91e-09!6;UBERON:0000167!3.91e-09!6;UBERON:0002372!3.13e-07!1;UBERON:0001961!3.13e-07!1;UBERON:0001744!3.13e-07!1;UBERON:0001735!3.13e-07!1;UBERON:0001831!4.97e-07!1;UBERON:0001567!4.97e-07!1;UBERON:0008801!4.97e-07!1;UBERON:0001736!5.26e-07!1;UBERON:0006298!5.26e-07!1;UBERON:0006122!6.60e-07!1;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1;UBERON:0000029!9.25e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!2.18e-31!115;UBERON:0001829!2.27e-12!2;UBERON:0001044!3.91e-09!6;UBERON:0003293!3.91e-09!6;UBERON:0003294!3.91e-09!6;UBERON:0010047!3.91e-09!6;UBERON:0000167!3.91e-09!6;UBERON:0002372!3.13e-07!1;UBERON:0001961!3.13e-07!1;UBERON:0001744!3.13e-07!1;UBERON:0001735!3.13e-07!1;UBERON:0001831!4.97e-07!1;UBERON:0001567!4.97e-07!1;UBERON:0008801!4.97e-07!1;UBERON:0001736!5.26e-07!1;UBERON:0006298!5.26e-07!1;UBERON:0006122!6.60e-07!1;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1;UBERON:0000029!9.25e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.87e-21;1!UBERON:0001961;1.87e-21;1!UBERON:0001744;1.87e-21;1!UBERON:0001042;1.87e-21;1!UBERON:0001735;1.87e-21;1!UBERON:0001831;4.66e-21;1!UBERON:0001567;4.66e-21;1!UBERON:0001044;3.71e-14;6!UBERON:0003293;3.71e-14;6!UBERON:0003294;3.71e-14;6!UBERON:0010047;3.71e-14;6!UBERON:0003408;3.71e-14;6!UBERON:0000167;3.71e-14;6!UBERON:0006562;2.02e-11;2!UBERON:0003127;3.18e-11;2!UBERON:0000341;3.18e-11;2!UBERON:0001829;3.18e-11;2!UBERON:0004089;3.18e-11;2!UBERON:0000161;4.44e-10;19!UBERON:0000166;4.44e-10;19!UBERON:0004921;8.98e-09;33!UBERON:0002106;6.56e-08;3!UBERON:0000165;5.03e-07;28 | |ontology_enrichment_uberon_v019=UBERON:0002372;1.87e-21;1!UBERON:0001961;1.87e-21;1!UBERON:0001744;1.87e-21;1!UBERON:0001042;1.87e-21;1!UBERON:0001735;1.87e-21;1!UBERON:0001831;4.66e-21;1!UBERON:0001567;4.66e-21;1!UBERON:0001044;3.71e-14;6!UBERON:0003293;3.71e-14;6!UBERON:0003294;3.71e-14;6!UBERON:0010047;3.71e-14;6!UBERON:0003408;3.71e-14;6!UBERON:0000167;3.71e-14;6!UBERON:0006562;2.02e-11;2!UBERON:0003127;3.18e-11;2!UBERON:0000341;3.18e-11;2!UBERON:0001829;3.18e-11;2!UBERON:0004089;3.18e-11;2!UBERON:0000161;4.44e-10;19!UBERON:0000166;4.44e-10;19!UBERON:0004921;8.98e-09;33!UBERON:0002106;6.56e-08;3!UBERON:0000165;5.03e-07;28 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.88e-21,1;UBERON:0001961,1.88e-21,1;UBERON:0001744,1.88e-21,1;UBERON:0001735,1.88e-21,1;UBERON:0001831,9.43e-21,1;UBERON:0001567,9.43e-21,1;UBERON:0008801,9.43e-21,1;UBERON:0001044,4.53e-14,6;UBERON:0003293,4.53e-14,6;UBERON:0003294,4.53e-14,6;UBERON:0010047,4.53e-14,6;UBERON:0000167,4.53e-14,6;UBERON:0000341,2.23e-11,2;UBERON:0003127,3.35e-11,2;UBERON:0001829,4.52e-11,2;UBERON:0004089,4.52e-11,2;UBERON:0003408,7.96e-09,10;UBERON:0000166,9.43e-09,22;UBERON:0007023,2.70e-08,114;UBERON:0002106,5.93e-08,3;UBERON:0004854,5.93e-08,3;UBERON:0009034,5.93e-08,3;UBERON:0002095,5.93e-08,3;UBERON:0004782,5.93e-08,3;UBERON:0003281,5.93e-08,3;UBERON:0009664,5.93e-08,3;UBERON:0002296,5.93e-08,3;UBERON:0005602,5.93e-08,3;UBERON:0001179,5.93e-08,3;UBERON:0006293,5.93e-08,3;UBERON:0000165,8.95e-07,29;UBERON:0000930,8.95e-07,29 | |||
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|short_description=p1@IGHV3OR16-8 | |short_description=p1@IGHV3OR16-8 | ||
}} | }} |
Latest revision as of 14:09, 16 September 2015
Short description: | p1@IGHV3OR16-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV3OR16-8_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 0bp_to_ENST00000438532_5end |
EntrezGene: | NA |
HGNC: | 5643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 1.88e-21 | 1 |
mucosa-associated lymphoid tissue | 1.88e-21 | 1 |
lymphoid tissue | 1.88e-21 | 1 |
tonsillar ring | 1.88e-21 | 1 |
parotid gland | 9.43e-21 | 1 |
cheek | 9.43e-21 | 1 |
parotid gland primordium | 9.43e-21 | 1 |
saliva-secreting gland | 4.53e-14 | 6 |
gland of oral region | 4.53e-14 | 6 |
gland of foregut | 4.53e-14 | 6 |
oral gland | 4.53e-14 | 6 |
oral cavity | 4.53e-14 | 6 |
throat | 2.23e-11 | 2 |
open tracheal system trachea | 3.35e-11 | 2 |
major salivary gland | 4.52e-11 | 2 |
midface | 4.52e-11 | 2 |
gland of gut | 7.96e-09 | 10 |
oral opening | 9.43e-09 | 22 |
adult organism | 2.70e-08 | 114 |
spleen | 5.93e-08 | 3 |
gastrointestinal system mesentery | 5.93e-08 | 3 |
stomach region | 5.93e-08 | 3 |
mesentery | 5.93e-08 | 3 |
gastrointestinal system serosa | 5.93e-08 | 3 |
mesentery of stomach | 5.93e-08 | 3 |
gut mesentery | 5.93e-08 | 3 |
dorsal mesentery | 5.93e-08 | 3 |
dorsal mesogastrium | 5.93e-08 | 3 |
peritoneal cavity | 5.93e-08 | 3 |
spleen primordium | 5.93e-08 | 3 |
mouth | 8.95e-07 | 29 |
stomodeum | 8.95e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.53e-21 | 1 |